Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_M13
(782 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 416 e-116
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 413 e-115
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 412 e-115
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 412 e-115
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 412 e-115
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 409 e-114
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 402 e-112
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 398 e-111
sp|Q6BJ25|EF2_DEBHA Elongation factor 2 (EF-2) 352 9e-97
sp|O23755|EF2_BETVU Elongation factor 2 (EF-2) 350 2e-96
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 416 bits (1068), Expect = e-116
Identities = 190/260 (73%), Positives = 222/260 (85%)
Frame = +1
Query: 1 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 180
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVMCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 181 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 360
+R RYL E Y+WDVTE+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 QRARYLAEKYEWDVTEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 361 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 540
GVLCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YA VLTA P L+EP+Y EI
Sbjct: 690 GVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQPRLMEPIYLVEI 749
Query: 541 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 720
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 721 PQCVFDHWQLFPGNPLDPLS 780
PQCVFDHWQ+ PG+P D S
Sbjct: 810 PQCVFDHWQILPGDPFDSAS 829
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 413 bits (1062), Expect = e-115
Identities = 188/257 (73%), Positives = 220/257 (85%)
Frame = +1
Query: 1 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 180
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 181 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 360
+R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 QRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 361 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 540
G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EI
Sbjct: 690 GALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEI 749
Query: 541 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 720
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 721 PQCVFDHWQLFPGNPLD 771
PQCVFDHWQ+ PG+P D
Sbjct: 810 PQCVFDHWQILPGDPFD 826
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 412 bits (1059), Expect = e-115
Identities = 188/257 (73%), Positives = 219/257 (85%)
Frame = +1
Query: 1 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 180
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 181 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 360
R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 ARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 361 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 540
G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EI
Sbjct: 690 GALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEI 749
Query: 541 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 720
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 721 PQCVFDHWQLFPGNPLD 771
PQCVFDHWQ+ PG+P D
Sbjct: 810 PQCVFDHWQILPGDPFD 826
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 412 bits (1059), Expect = e-115
Identities = 188/257 (73%), Positives = 219/257 (85%)
Frame = +1
Query: 1 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 180
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 181 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 360
R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 ARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 361 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 540
G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EI
Sbjct: 690 GALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEI 749
Query: 541 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 720
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 721 PQCVFDHWQLFPGNPLD 771
PQCVFDHWQ+ PG+P D
Sbjct: 810 PQCVFDHWQILPGDPFD 826
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 412 bits (1059), Expect = e-115
Identities = 188/257 (73%), Positives = 219/257 (85%)
Frame = +1
Query: 1 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 180
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 181 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 360
R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 ARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 361 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 540
G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EI
Sbjct: 690 GALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEI 749
Query: 541 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 720
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 721 PQCVFDHWQLFPGNPLD 771
PQCVFDHWQ+ PG+P D
Sbjct: 810 PQCVFDHWQILPGDPFD 826
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 409 bits (1051), Expect = e-114
Identities = 187/257 (72%), Positives = 218/257 (84%)
Frame = +1
Query: 1 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 180
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 181 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 360
R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 ARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 361 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 540
G LCEENMRGVRF++HDVTLHADAIHR GGQIIPTARRC YASVLTA P L+EP+Y EI
Sbjct: 690 GALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTAQPRLMEPIYLVEI 749
Query: 541 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 720
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 721 PQCVFDHWQLFPGNPLD 771
PQCVFDHWQ+ PG+P D
Sbjct: 810 PQCVFDHWQILPGDPFD 826
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 402 bits (1034), Expect = e-112
Identities = 187/257 (72%), Positives = 218/257 (84%)
Frame = +1
Query: 1 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 180
+KKSDPVVSYRE+V S+++CLSKSPNKHNRL+ TA PM + L+ DI+ G + AR E K
Sbjct: 564 LKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNARDEFK 623
Query: 181 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 360
R + L E Y++DVTE+RKIWCFGPDG GPNL++DV+KGVQYLNEIKDSVVA F WAT++
Sbjct: 624 ARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATRE 683
Query: 361 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 540
GVL +ENMRGVRFN+HDVTLHADAIHRGGGQIIPTARR FYASVLTA P LLEPVY EI
Sbjct: 684 GVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEI 743
Query: 541 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 720
Q PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 744 QCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 803
Query: 721 PQCVFDHWQLFPGNPLD 771
PQCVFDHWQ+ PG+PL+
Sbjct: 804 PQCVFDHWQVLPGDPLE 820
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 398 bits (1023), Expect = e-111
Identities = 183/260 (70%), Positives = 216/260 (83%)
Frame = +1
Query: 1 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 180
+KKSDPVVSYRE+VS+ S ++CLSKSPNKHNRL M A PM + L DID G ++A+ E K
Sbjct: 556 LKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFK 615
Query: 181 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 360
R RYL E YD+DVTE+RKIWCFGPDG GPN ++D +K VQYLNEIKDSVVA F WA+K+
Sbjct: 616 ARARYLSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKE 675
Query: 361 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 540
G+L +EN+RGVRFNI+DVTLHADAIHRGGGQIIPT RRC YA+ +TA P L+EPVY CEI
Sbjct: 676 GILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEI 735
Query: 541 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 720
Q PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 736 QCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 795
Query: 721 PQCVFDHWQLFPGNPLDPLS 780
PQCVFDHWQ+ PG+P +P S
Sbjct: 796 PQCVFDHWQVLPGDPSEPSS 815
>sp|Q6BJ25|EF2_DEBHA Elongation factor 2 (EF-2)
Length = 842
Score = 352 bits (902), Expect = 9e-97
Identities = 171/260 (65%), Positives = 199/260 (76%)
Frame = +1
Query: 1 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 180
+K S P+VSYRE+V+ SS V LSKSPNKHNR+Y+ A P+ EE+S DI+ G I R + K
Sbjct: 554 LKISPPIVSYRETVNAESSMVALSKSPNKHNRIYVKAQPIDEEVSLDIEKGVINPRDDFK 613
Query: 181 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 360
R R L + + WDVT++RKIWCFGPDGNGPNLVVD +K VQYLNEIKDSVVAAF WATK+
Sbjct: 614 ARARILADNHGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWATKE 673
Query: 361 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 540
G + EN+R VR NI DVTLHADAIHRGGGQIIPT RR YAS+L A P + EPV+ EI
Sbjct: 674 GPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEI 733
Query: 541 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 720
Q PE A+GGIYS LNK+RG + SE Q GTP + VKAYLPVNESF F+ ELR TGGQAF
Sbjct: 734 QCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFSGELRQSTGGQAF 793
Query: 721 PQCVFDHWQLFPGNPLDPLS 780
PQ +FDHW G+P DP S
Sbjct: 794 PQLIFDHWANLNGDPTDPTS 813
>sp|O23755|EF2_BETVU Elongation factor 2 (EF-2)
Length = 843
Score = 350 bits (899), Expect = 2e-96
Identities = 170/257 (66%), Positives = 195/257 (75%)
Frame = +1
Query: 1 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 180
I KSDPVVS+RE+V S +SKSPNKHNRLYM A PM E L+ ID G+I R + K
Sbjct: 555 IIKSDPVVSFRETVLDRSVRTVMSKSPNKHNRLYMEARPMEEGLAEAIDEGRIGPRDDPK 614
Query: 181 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 360
R + L E Y WD ++KIWCFGP+ GPN+VVD+ KGVQYLNEIKDSVVA F WA+K+
Sbjct: 615 NRSKILAEEYGWDKDLAKKIWCFGPETTGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKE 674
Query: 361 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 540
G L EENMRG+ F + DV LH DAIHRGGGQIIPTARR FYAS LTA P LLEPVY EI
Sbjct: 675 GALAEENMRGICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYLVEI 734
Query: 541 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 720
Q PE ALGGIYS LN++RG +F EMQ GTP Y +KAYLPV ESF F+S LRA T GQAF
Sbjct: 735 QAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRASTSGQAF 794
Query: 721 PQCVFDHWQLFPGNPLD 771
PQCVFDHW++ P +PL+
Sbjct: 795 PQCVFDHWEMMPSDPLE 811
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,467,979
Number of Sequences: 369166
Number of extensions: 1923853
Number of successful extensions: 5316
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5138
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7357347200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)