Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_M08
(418 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 121 5e-28
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 121 5e-28
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 121 5e-28
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 119 3e-27
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 118 6e-27
sp|P16627|HS70L_MOUSE Heat shock 70 kDa protein 1L (Heat sh... 118 6e-27
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 117 7e-27
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 116 2e-26
sp|P55063|HS70L_RAT Heat shock 70 kDa protein 1L (Heat shoc... 116 2e-26
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 116 2e-26
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 121 bits (304), Expect = 5e-28
Identities = 58/113 (51%), Positives = 75/113 (66%)
Frame = +1
Query: 1 DRIAAKNSLESYAYQMKATVGDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFD 180
D++++KNSLESYA+ MKATV DEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF+
Sbjct: 534 DKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFE 593
Query: 181 YHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 339
+ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 594 HQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 121 bits (304), Expect = 5e-28
Identities = 58/113 (51%), Positives = 75/113 (66%)
Frame = +1
Query: 1 DRIAAKNSLESYAYQMKATVGDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFD 180
D++++KNSLESYA+ MKATV DEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF+
Sbjct: 534 DKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFE 593
Query: 181 YHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 339
+ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 594 HQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 121 bits (304), Expect = 5e-28
Identities = 58/113 (51%), Positives = 75/113 (66%)
Frame = +1
Query: 1 DRIAAKNSLESYAYQMKATVGDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFD 180
D++++KNSLESYA+ MKATV DEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF+
Sbjct: 534 DKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFE 593
Query: 181 YHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 339
+ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 594 HQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 119 bits (297), Expect = 3e-27
Identities = 59/116 (50%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Frame = +1
Query: 1 DRIAAKNSLESYAYQMKATVGDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFD 180
D+++AKN LESYA+ MK+TV DEKLK KIS+ D++ I+DKC E IGWLDKNQ A ++EF+
Sbjct: 534 DKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFE 593
Query: 181 YHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 339
+ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 594 HQQKELEKVCNPIITKLYQSAGGMPGGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 118 bits (295), Expect = 6e-27
Identities = 61/113 (53%), Positives = 72/113 (63%)
Frame = +1
Query: 1 DRIAAKNSLESYAYQMKATVGDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFD 180
DRIAAKN+LESYA+ MK T+ DEKLKDKISE D+K I +KC E + WLD NQ A KDEF+
Sbjct: 533 DRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFE 592
Query: 181 YHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 339
+ KELE VCNPI+TK+YQ GPT+EEVD
Sbjct: 593 HRQKELESVCNPIITKLYQSAGGMPGGMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|P16627|HS70L_MOUSE Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein 1-like)
(Heat shock 70 kDa-like protein 1) (Spermatid-specific
heat shock protein 70)
Length = 641
Score = 118 bits (295), Expect = 6e-27
Identities = 60/113 (53%), Positives = 74/113 (65%)
Frame = +1
Query: 1 DRIAAKNSLESYAYQMKATVGDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFD 180
++IAAKN+LESYA+ MK+ VGDE LKDKISESD+K I+DKC E + WL+ NQ A KDEFD
Sbjct: 536 EKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCNEVLSWLEANQLAEKDEFD 595
Query: 181 YHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 339
+ KELE +CNPI+TK+YQ GPT+EEVD
Sbjct: 596 HKRKELENMCNPIITKLYQ-------SGCTGPTCTPGYTPGRAATGPTIEEVD 641
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 117 bits (294), Expect = 7e-27
Identities = 58/118 (49%), Positives = 76/118 (64%), Gaps = 5/118 (4%)
Frame = +1
Query: 1 DRIAAKNSLESYAYQMKATVGDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFD 180
D++++KNSLESYA+ MK+TV DEKL+ KIS+ D+ I++KC E IGWLDKNQ A K+E++
Sbjct: 534 DKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYE 593
Query: 181 YHYKELEKVCNPIMTKMYQ-----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 339
+H KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 594 HHQKELEKVCNPIITKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 116 bits (291), Expect = 2e-26
Identities = 58/113 (51%), Positives = 73/113 (64%)
Frame = +1
Query: 1 DRIAAKNSLESYAYQMKATVGDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFD 180
DR+AAKN+LESY Y +K TV DEKL+ KISE D+ I+DKCQE I WLD+NQ A KDE++
Sbjct: 537 DRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYE 596
Query: 181 YHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 339
+ KELE+VCNPI++K+YQ GPT+EEVD
Sbjct: 597 HKQKELERVCNPIISKLYQ----------GGPGGGSGGGGSGASGGPTIEEVD 639
>sp|P55063|HS70L_RAT Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein 1-like)
(Heat shock 70 kDa protein 3) (HSP70.3)
Length = 641
Score = 116 bits (291), Expect = 2e-26
Identities = 59/113 (52%), Positives = 74/113 (65%)
Frame = +1
Query: 1 DRIAAKNSLESYAYQMKATVGDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFD 180
++IAAKN+LESYA+ MK+ VGDE LKDKISESD+K I+DKC E + WL+ NQ A K+EFD
Sbjct: 536 EKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCSEVLSWLEANQLAEKEEFD 595
Query: 181 YHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 339
+ KELE +CNPI+TK+YQ GPT+EEVD
Sbjct: 596 HKRKELENMCNPIITKLYQ-------SGCTGPTCAPGYTPGRAATGPTIEEVD 641
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 116 bits (290), Expect = 2e-26
Identities = 58/116 (50%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Frame = +1
Query: 1 DRIAAKNSLESYAYQMKATVGDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFD 180
D+++AKN LESYA+ MK+TV DEKLK KIS+ D+ I+DKC E I WLDKNQ A KDE++
Sbjct: 534 DKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYE 593
Query: 181 YHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 339
+ K+LEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 594 HQQKDLEKVCNPIITKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,567,421
Number of Sequences: 369166
Number of extensions: 413631
Number of successful extensions: 1596
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 68,354,980
effective HSP length: 99
effective length of database: 50,066,215
effective search space used: 1952582385
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)