Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_L17
(831 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 309 7e-84
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 307 3e-83
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 306 5e-83
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 306 5e-83
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 306 5e-83
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 305 1e-82
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 305 1e-82
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 303 5e-82
sp|P17879|HS70B_MOUSE Heat shock 70 kDa protein 1B (HSP70.1) 301 2e-81
sp|Q61696|HS70A_MOUSE Heat shock 70 kDa protein 1A (Heat sh... 301 2e-81
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 309 bits (791), Expect = 7e-84
Identities = 160/237 (67%), Positives = 179/237 (75%)
Frame = +3
Query: 15 IPKIQKLLQDLFHGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXG 194
IPKIQKLLQD F+GKELNKSINPDE ILSGDKSE VQD G
Sbjct: 343 IPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLG 402
Query: 195 IETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGKFELS 374
IETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMT+DNNLLGKFEL+
Sbjct: 403 IETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELT 462
Query: 375 GIPPAPRGVPQVEVTFDIDANGILNVSAVEKSTGKENKITISNDKGRLSKDDIERMVSEA 554
GIPPAPRGVPQ+EVTFDIDANGI+NVSAV+KSTGKENKITI+NDKGRLSK+DIERMV EA
Sbjct: 463 GIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEA 522
Query: 555 EKYKQQDELQKDRVAAKNALESYAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIG 725
EKYK +D++Q+D+V+AKN LESYA+ MK+T+ I+DKC+EVIG
Sbjct: 523 EKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIG 579
Score = 68.2 bits (165), Expect = 3e-11
Identities = 28/37 (75%), Positives = 34/37 (91%)
Frame = +1
Query: 721 LGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQAS 831
+GWLD NQTAE+EE+EH QKELEKVCNPI+TK YQ++
Sbjct: 578 IGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSA 614
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 307 bits (786), Expect = 3e-83
Identities = 166/272 (61%), Positives = 187/272 (68%)
Frame = +3
Query: 15 IPKIQKLLQDLFHGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXG 194
IPK+QKLL DLF GKELNKSINPDE ILSGDKSEAVQD G
Sbjct: 344 IPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLG 403
Query: 195 IETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGKFELS 374
IETAGGVMTALIKRN YSDNQPGVLIQVYEGERAMT+DNNLLGKFELS
Sbjct: 404 IETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELS 463
Query: 375 GIPPAPRGVPQVEVTFDIDANGILNVSAVEKSTGKENKITISNDKGRLSKDDIERMVSEA 554
GIPPAPRGVPQ+EVTFDIDANGILNVSA +KSTGK+NKITI+NDKGRLSKDDIERMV+EA
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDDIERMVNEA 523
Query: 555 EKYKQQDELQKDRVAAKNALESYAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGLVG 734
EKYK DE QKDR+ AKN LESYA+ +K T+ I DKC E++ +
Sbjct: 524 EKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWL- 582
Query: 735 SQSDCREGGIRTSSEGTRKGLQSYND*ILSSI 830
D + + E +K L+ + I+S +
Sbjct: 583 ---DSNQTAEKEEFEHQQKDLEGLANPIISKL 611
Score = 57.0 bits (136), Expect = 6e-08
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = +1
Query: 721 LGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQAS 831
L WLD NQTAEKEE+EH QK+LE + NPI++K YQ++
Sbjct: 579 LKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQSA 615
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 306 bits (784), Expect = 5e-83
Identities = 159/236 (67%), Positives = 177/236 (75%)
Frame = +3
Query: 15 IPKIQKLLQDLFHGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXG 194
IPKIQKLLQD F+GKELNKSINPDE ILSGDKSE VQD G
Sbjct: 343 IPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLG 402
Query: 195 IETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGKFELS 374
IETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMT+DNNLLGKFEL+
Sbjct: 403 IETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELT 462
Query: 375 GIPPAPRGVPQVEVTFDIDANGILNVSAVEKSTGKENKITISNDKGRLSKDDIERMVSEA 554
GIPPAPRGVPQ+EVTFDIDANGILNVSAV+KSTGKENKITI+NDKGRLSK+DIERMV EA
Sbjct: 463 GIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEA 522
Query: 555 EKYKQQDELQKDRVAAKNALESYAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVI 722
EKYK +DE Q+D+V++KN+LESYA+ MK T+ I+DKC+E+I
Sbjct: 523 EKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEII 578
Score = 67.0 bits (162), Expect = 6e-11
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 721 LGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQAS 831
+ WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ++
Sbjct: 578 INWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 614
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 306 bits (784), Expect = 5e-83
Identities = 159/236 (67%), Positives = 177/236 (75%)
Frame = +3
Query: 15 IPKIQKLLQDLFHGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXG 194
IPKIQKLLQD F+GKELNKSINPDE ILSGDKSE VQD G
Sbjct: 343 IPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLG 402
Query: 195 IETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGKFELS 374
IETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMT+DNNLLGKFEL+
Sbjct: 403 IETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELT 462
Query: 375 GIPPAPRGVPQVEVTFDIDANGILNVSAVEKSTGKENKITISNDKGRLSKDDIERMVSEA 554
GIPPAPRGVPQ+EVTFDIDANGILNVSAV+KSTGKENKITI+NDKGRLSK+DIERMV EA
Sbjct: 463 GIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEA 522
Query: 555 EKYKQQDELQKDRVAAKNALESYAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVI 722
EKYK +DE Q+D+V++KN+LESYA+ MK T+ I+DKC+E+I
Sbjct: 523 EKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEII 578
Score = 67.0 bits (162), Expect = 6e-11
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 721 LGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQAS 831
+ WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ++
Sbjct: 578 ISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 614
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 306 bits (784), Expect = 5e-83
Identities = 159/236 (67%), Positives = 177/236 (75%)
Frame = +3
Query: 15 IPKIQKLLQDLFHGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXG 194
IPKIQKLLQD F+GKELNKSINPDE ILSGDKSE VQD G
Sbjct: 343 IPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLG 402
Query: 195 IETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGKFELS 374
IETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMT+DNNLLGKFEL+
Sbjct: 403 IETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELT 462
Query: 375 GIPPAPRGVPQVEVTFDIDANGILNVSAVEKSTGKENKITISNDKGRLSKDDIERMVSEA 554
GIPPAPRGVPQ+EVTFDIDANGILNVSAV+KSTGKENKITI+NDKGRLSK+DIERMV EA
Sbjct: 463 GIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEA 522
Query: 555 EKYKQQDELQKDRVAAKNALESYAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVI 722
EKYK +DE Q+D+V++KN+LESYA+ MK T+ I+DKC+E+I
Sbjct: 523 EKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEII 578
Score = 67.0 bits (162), Expect = 6e-11
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 721 LGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQAS 831
+ WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ++
Sbjct: 578 ISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 614
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 305 bits (780), Expect = 1e-82
Identities = 157/237 (66%), Positives = 179/237 (75%)
Frame = +3
Query: 15 IPKIQKLLQDLFHGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXG 194
IPKIQKLLQD F+GKELNKSINPDE ILSGDKSE VQD G
Sbjct: 343 IPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLG 402
Query: 195 IETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGKFELS 374
IETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMT+DNNLLGKFEL+
Sbjct: 403 IETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELT 462
Query: 375 GIPPAPRGVPQVEVTFDIDANGILNVSAVEKSTGKENKITISNDKGRLSKDDIERMVSEA 554
GIPPAPRGVPQ+EVTFDIDANGI+NVSA +KSTGKENKITI+NDKGRLSK+DIERMV EA
Sbjct: 463 GIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKGRLSKEDIERMVQEA 522
Query: 555 EKYKQQDELQKDRVAAKNALESYAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIG 725
EKYK +D++Q+D+V++KN+LESYA+ MK+T+ I++KC+EVIG
Sbjct: 523 EKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIG 579
Score = 73.6 bits (179), Expect = 6e-13
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +1
Query: 721 LGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQAS 831
+GWLD NQTAEKEEYEHHQKELEKVCNPI+TK YQ +
Sbjct: 578 IGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGA 614
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 305 bits (780), Expect = 1e-82
Identities = 158/236 (66%), Positives = 177/236 (75%)
Frame = +3
Query: 15 IPKIQKLLQDLFHGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXG 194
IPKIQKLLQD F+GKELNKSINPDE ILSGDKSE VQD G
Sbjct: 343 IPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLG 402
Query: 195 IETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGKFELS 374
IETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMT+DNNLLGKFEL+
Sbjct: 403 IETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELT 462
Query: 375 GIPPAPRGVPQVEVTFDIDANGILNVSAVEKSTGKENKITISNDKGRLSKDDIERMVSEA 554
GIPPAPRGVPQ+EVTFDIDANGILNVSAV+KSTGKENKITI+NDKGRLSK+DIERMV EA
Sbjct: 463 GIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEA 522
Query: 555 EKYKQQDELQKDRVAAKNALESYAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVI 722
EKYK +DE Q+D+V++KN+L+SYA+ MK T+ I+DKC+E+I
Sbjct: 523 EKYKAEDEKQRDKVSSKNSLKSYAFNMKATVEDEKLQGKINDEDKQKILDKCNEII 578
Score = 67.0 bits (162), Expect = 6e-11
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +1
Query: 721 LGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQAS 831
+ WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ++
Sbjct: 578 INWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA 614
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 303 bits (775), Expect = 5e-82
Identities = 159/236 (67%), Positives = 172/236 (72%)
Frame = +3
Query: 15 IPKIQKLLQDLFHGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXG 194
IPK+QKLL D F GKELNKSINPDE ILSGDKSEAVQD G
Sbjct: 342 IPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLG 401
Query: 195 IETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGKFELS 374
IETAGGVMTALIKRN YSDNQPGVLIQVYEGERA+T+DNNLLGKFELS
Sbjct: 402 IETAGGVMTALIKRNTTIPTKTSETFTTYSDNQPGVLIQVYEGERALTKDNNLLGKFELS 461
Query: 375 GIPPAPRGVPQVEVTFDIDANGILNVSAVEKSTGKENKITISNDKGRLSKDDIERMVSEA 554
GIPPAPRGVPQ+EVTFDIDANGILNVSA +KSTGK+NKITI+NDKGRLSKD+IERMV EA
Sbjct: 462 GIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEA 521
Query: 555 EKYKQQDELQKDRVAAKNALESYAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVI 722
EKYK DE QKDR+AAKNALESYA+ MK T+ I +KC E +
Sbjct: 522 EKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETV 577
Score = 62.8 bits (151), Expect = 1e-09
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +1
Query: 727 WLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQAS 831
WLD NQTAEK+E+EH QKELE VCNPI+TK YQ++
Sbjct: 579 WLDGNQTAEKDEFEHRQKELESVCNPIITKLYQSA 613
>sp|P17879|HS70B_MOUSE Heat shock 70 kDa protein 1B (HSP70.1)
Length = 642
Score = 301 bits (770), Expect = 2e-81
Identities = 155/243 (63%), Positives = 178/243 (73%)
Frame = +3
Query: 15 IPKIQKLLQDLFHGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXG 194
IPK+QKLLQD F+G++LNKSINPDE IL GDKSE VQD G
Sbjct: 343 IPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLG 402
Query: 195 IETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGKFELS 374
+ETAGGVMTALIKRN YSDNQPGVLIQVYEGERAMTRDNNLLG+FELS
Sbjct: 403 LETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELS 462
Query: 375 GIPPAPRGVPQVEVTFDIDANGILNVSAVEKSTGKENKITISNDKGRLSKDDIERMVSEA 554
GIPPAPRGVPQ+EVTFDIDANGILNV+A +KSTGK NKITI+NDKGRLSK++IERMV EA
Sbjct: 463 GIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEA 522
Query: 555 EKYKQQDELQKDRVAAKNALESYAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGLVG 734
E+YK +DE+Q+DRVAAKNALESYA+ MK+ + ++DKC EVI +
Sbjct: 523 ERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLD 582
Query: 735 SQS 743
S +
Sbjct: 583 SNT 585
Score = 48.9 bits (115), Expect = 2e-05
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +1
Query: 691 KRLLINAVK*LGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQAS 831
K++L + + WLD N A+KEE+ H ++ELE+VC+PI++ YQ +
Sbjct: 568 KKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQGA 614
>sp|Q61696|HS70A_MOUSE Heat shock 70 kDa protein 1A (Heat shock 70 kDa protein 3) (HSP70.3)
(Hsp68)
Length = 641
Score = 301 bits (770), Expect = 2e-81
Identities = 155/243 (63%), Positives = 178/243 (73%)
Frame = +3
Query: 15 IPKIQKLLQDLFHGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXG 194
IPK+QKLLQD F+G++LNKSINPDE IL GDKSE VQD G
Sbjct: 343 IPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLG 402
Query: 195 IETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTRDNNLLGKFELS 374
+ETAGGVMTALIKRN YSDNQPGVLIQVYEGERAMTRDNNLLG+FELS
Sbjct: 403 LETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELS 462
Query: 375 GIPPAPRGVPQVEVTFDIDANGILNVSAVEKSTGKENKITISNDKGRLSKDDIERMVSEA 554
GIPPAPRGVPQ+EVTFDIDANGILNV+A +KSTGK NKITI+NDKGRLSK++IERMV EA
Sbjct: 463 GIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEA 522
Query: 555 EKYKQQDELQKDRVAAKNALESYAYQMKTTMXXXXXXXXXXXXXXXAIIDKCSEVIGLVG 734
E+YK +DE+Q+DRVAAKNALESYA+ MK+ + ++DKC EVI +
Sbjct: 523 ERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLD 582
Query: 735 SQS 743
S +
Sbjct: 583 SNT 585
Score = 48.9 bits (115), Expect = 2e-05
Identities = 20/47 (42%), Positives = 33/47 (70%)
Frame = +1
Query: 691 KRLLINAVK*LGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQAS 831
K++L + + WLD N A+KEE+ H ++ELE+VC+PI++ YQ +
Sbjct: 568 KKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQGA 614
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,354,402
Number of Sequences: 369166
Number of extensions: 1709455
Number of successful extensions: 7301
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6862
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8052550455
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)