Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_K20
(849 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5RFM9|FTHFD_PONPY 10-formyltetrahydrofolate dehydrogena... 324 2e-88
sp|O75891|FTHFD_HUMAN 10-formyltetrahydrofolate dehydrogena... 320 2e-87
sp|Q8R0Y6|FTHFD_MOUSE 10-formyltetrahydrofolate dehydrogena... 317 2e-86
sp|P28037|FTHFD_RAT 10-formyltetrahydrofolate dehydrogenase... 317 2e-86
sp|P00352|AL1A1_HUMAN Retinal dehydrogenase 1 (RalDH1) (RAL... 174 2e-43
sp|Q8HYE4|AL1A1_MACFA Retinal dehydrogenase 1 (RalDH1) (RAL... 174 2e-43
sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 (RalDH1) (RAL... 172 8e-43
sp|Q8MI17|AL1A1_RABIT Retinal dehydrogenase 1 (RalDH1) (RAL... 171 3e-42
sp|P51647|AL1A1_RAT Retinal dehydrogenase 1 (RalDH1) (RALDH... 170 4e-42
sp|Q9JHW9|AL1A3_MOUSE Aldehyde dehydrogenase 1A3 (Aldehyde ... 170 4e-42
>sp|Q5RFM9|FTHFD_PONPY 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (Aldehyde
dehydrogenase 1 family member L1)
Length = 902
Score = 324 bits (830), Expect = 2e-88
Identities = 158/259 (61%), Positives = 196/259 (75%), Gaps = 1/259 (0%)
Frame = +2
Query: 5 RLVEEIKFAFD-VELKIDHIYLYNTFDSLFRWIVLKKRGGGVSKKLIYDAVIINANKITF 181
RLVEE+K D +EL+ + +Y+ +TF + +V K RG + D V + NK T
Sbjct: 359 RLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKLRGDDEEGECSIDYVEMAVNKRTI 418
Query: 182 PVPHQLFINNEFVDSESGKDYETKNPADESVICRVSFSSXXXXXXXXXXXXXXFEYGEWG 361
+PHQLFI EFVD+E K YET NP D SVIC+VS + FE G WG
Sbjct: 419 RIPHQLFIGGEFVDAEGAKTYETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWG 478
Query: 362 KMNARERGRIMYKLADLLEKHAEELATLESLDSGAVYTLALKTHVGMSIETFRYFAGWCD 541
K++AR+RGR++Y+LADL+E+H EELAT+E+LD+GAVYTLALKTHVGMSI+TFRYFAGWCD
Sbjct: 479 KISARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCD 538
Query: 542 KIQGSVIPISNARPNKNLSITKKEPIGVCGIITPWNYPLMMLAWKMAACLAAGNTVVMKP 721
KIQGS IPI+ ARPN+NL++T+KEP+GVCGII PWNYPLMML+WK AACLAAGNTVV+KP
Sbjct: 539 KIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKP 598
Query: 722 AQVTPLTSLKFCEFVVEAG 778
AQVTPLT+LKF E ++AG
Sbjct: 599 AQVTPLTALKFAELTLKAG 617
Score = 36.2 bits (82), Expect = 0.12
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 715 ETSPSNTFNFAKVL*IRGRSWFPPGVINVLPGSGAITGTAISEH 846
+ +P FA++ G P GV+NVLPGSG++ G +S+H
Sbjct: 600 QVTPLTALKFAELTLKAG---IPKGVVNVLPGSGSLVGQRLSDH 640
>sp|O75891|FTHFD_HUMAN 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (Aldehyde
dehydrogenase 1 family member L1)
Length = 902
Score = 320 bits (821), Expect = 2e-87
Identities = 158/259 (61%), Positives = 195/259 (75%), Gaps = 1/259 (0%)
Frame = +2
Query: 5 RLVEEIKFAFD-VELKIDHIYLYNTFDSLFRWIVLKKRGGGVSKKLIYDAVIINANKITF 181
RLVEE+K D +EL+ + +Y+ +TF + +V K RG + D V + NK T
Sbjct: 359 RLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRKLRGDDEEGECSIDYVEMAVNKRTV 418
Query: 182 PVPHQLFINNEFVDSESGKDYETKNPADESVICRVSFSSXXXXXXXXXXXXXXFEYGEWG 361
+PHQLFI EFVD+E K ET NP D SVIC+VS + FE G WG
Sbjct: 419 RMPHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKDAFENGRWG 478
Query: 362 KMNARERGRIMYKLADLLEKHAEELATLESLDSGAVYTLALKTHVGMSIETFRYFAGWCD 541
K++AR+RGR+MY+LADL+E+H EELAT+E+LD+GAVYTLALKTHVGMSI+TFRYFAGWCD
Sbjct: 479 KISARDRGRLMYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCD 538
Query: 542 KIQGSVIPISNARPNKNLSITKKEPIGVCGIITPWNYPLMMLAWKMAACLAAGNTVVMKP 721
KIQGS IPI+ ARPN+NL++T+KEP+GVCGII PWNYPLMML+WK AACLAAGNTVV+KP
Sbjct: 539 KIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAGNTVVIKP 598
Query: 722 AQVTPLTSLKFCEFVVEAG 778
AQVTPLT+LKF E ++AG
Sbjct: 599 AQVTPLTALKFAELTLKAG 617
Score = 36.2 bits (82), Expect = 0.12
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 715 ETSPSNTFNFAKVL*IRGRSWFPPGVINVLPGSGAITGTAISEH 846
+ +P FA++ G P GV+NVLPGSG++ G +S+H
Sbjct: 600 QVTPLTALKFAELTLKAG---IPKGVVNVLPGSGSLVGQRLSDH 640
>sp|Q8R0Y6|FTHFD_MOUSE 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (Aldehyde
dehydrogenase 1 family member L1)
Length = 902
Score = 317 bits (813), Expect = 2e-86
Identities = 154/259 (59%), Positives = 194/259 (74%), Gaps = 1/259 (0%)
Frame = +2
Query: 5 RLVEEIKFAFD-VELKIDHIYLYNTFDSLFRWIVLKKRGGGVSKKLIYDAVIINANKITF 181
RLVEE+K D +EL+ + +Y+ TF + +V K RG + + + V K+T
Sbjct: 359 RLVEEVKELCDGLELENEDVYMATTFGDFIQLLVRKLRGEDGESECVINYVEKAVKKLTL 418
Query: 182 PVPHQLFINNEFVDSESGKDYETKNPADESVICRVSFSSXXXXXXXXXXXXXXFEYGEWG 361
+P+QLFI EFVD+E K Y T NP D SVIC+VS + FE G WG
Sbjct: 419 QMPYQLFIGGEFVDAEGAKTYSTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWG 478
Query: 362 KMNARERGRIMYKLADLLEKHAEELATLESLDSGAVYTLALKTHVGMSIETFRYFAGWCD 541
K+NAR+RGR++Y+LADL+E+H EELAT+E+LD+GAVYTLALKTHVGMSI+TFRYFAGWCD
Sbjct: 479 KINARDRGRLLYRLADLMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCD 538
Query: 542 KIQGSVIPISNARPNKNLSITKKEPIGVCGIITPWNYPLMMLAWKMAACLAAGNTVVMKP 721
KIQG+ IPI+ ARPN+NL++TKKEP+GVCGI+ PWNYPLMML+WK AACLAAGNTVV+KP
Sbjct: 539 KIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKP 598
Query: 722 AQVTPLTSLKFCEFVVEAG 778
AQVTPLT+LKF E ++AG
Sbjct: 599 AQVTPLTALKFAELTLKAG 617
Score = 35.8 bits (81), Expect = 0.15
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 715 ETSPSNTFNFAKVL*IRGRSWFPPGVINVLPGSGAITGTAISEH 846
+ +P FA++ G P GV+N+LPGSG++ G +S+H
Sbjct: 600 QVTPLTALKFAELTLKAG---IPKGVVNILPGSGSLVGQRLSDH 640
>sp|P28037|FTHFD_RAT 10-formyltetrahydrofolate dehydrogenase (10-FTHFDH) (Aldehyde
dehydrogenase 1 family member L1) (FBP-CI)
Length = 902
Score = 317 bits (813), Expect = 2e-86
Identities = 154/259 (59%), Positives = 194/259 (74%), Gaps = 1/259 (0%)
Frame = +2
Query: 5 RLVEEIKFAFD-VELKIDHIYLYNTFDSLFRWIVLKKRGGGVSKKLIYDAVIINANKITF 181
RLVEE+K D +EL+ + +Y+ TF + +V K RG + + + V NK+T
Sbjct: 359 RLVEEVKELCDGLELENEDVYMATTFREFIQLLVRKLRGEDDESECVINYVERAVNKLTL 418
Query: 182 PVPHQLFINNEFVDSESGKDYETKNPADESVICRVSFSSXXXXXXXXXXXXXXFEYGEWG 361
+P+QLFI EFVD+E K Y T NP D SVIC+VS + FE G WG
Sbjct: 419 QMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWG 478
Query: 362 KMNARERGRIMYKLADLLEKHAEELATLESLDSGAVYTLALKTHVGMSIETFRYFAGWCD 541
K+NAR+RGR++Y+LAD++E+H EELAT+E+LD GAVYTLALKTHVGMSI+TFRYFAGWCD
Sbjct: 479 KINARDRGRLLYRLADVMEQHQEELATIEALDRGAVYTLALKTHVGMSIQTFRYFAGWCD 538
Query: 542 KIQGSVIPISNARPNKNLSITKKEPIGVCGIITPWNYPLMMLAWKMAACLAAGNTVVMKP 721
KIQG+ IPI+ ARPN+NL++TKKEP+GVCGI+ PWNYPLMML+WK AACLAAGNTVV+KP
Sbjct: 539 KIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKP 598
Query: 722 AQVTPLTSLKFCEFVVEAG 778
AQVTPLT+LKF E ++AG
Sbjct: 599 AQVTPLTALKFAELTLKAG 617
Score = 35.8 bits (81), Expect = 0.15
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 715 ETSPSNTFNFAKVL*IRGRSWFPPGVINVLPGSGAITGTAISEH 846
+ +P FA++ G P GV+N+LPGSG++ G +S+H
Sbjct: 600 QVTPLTALKFAELTLKAG---IPKGVVNILPGSGSLVGQRLSDH 640
>sp|P00352|AL1A1_HUMAN Retinal dehydrogenase 1 (RalDH1) (RALDH 1) (Aldehyde dehydrogenase
family 1 member A1) (Aldehyde dehydrogenase, cytosolic)
(ALHDII) (ALDH-E1)
Length = 501
Score = 174 bits (442), Expect = 2e-43
Identities = 91/197 (46%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Frame = +2
Query: 194 QLFINNEFVDSESGKDYETKNPADESVICRVSFSSXXXXXXXXXXXXXXFEYGE-WGKMN 370
++FINNE+ DS SGK + NPA E +C+V F+ G W M+
Sbjct: 22 KIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKEDVDKAVKAARQAFQIGSPWRTMD 81
Query: 371 ARERGRIMYKLADLLEKHAEELATLESLDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQ 550
A ERGR++YKLADL+E+ LAT+ES++ G +Y+ A + I+T RY AGW DKIQ
Sbjct: 82 ASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQ 141
Query: 551 GSVIPISNARPNKNLSITKKEPIGVCGIITPWNYPLMMLAWKMAACLAAGNTVVMKPAQV 730
G IPI + T+ EPIGVCG I PWN+PL+ML WK+ L+ GNTVV+KPA+
Sbjct: 142 GRTIPIDG----NFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQ 197
Query: 731 TPLTSLKFCEFVVEAGF 781
TPLT+L + EAGF
Sbjct: 198 TPLTALHVASLIKEAGF 214
Score = 37.4 bits (85), Expect = 0.053
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 715 ETSPSNTFNFAKVL*IRGRSWFPPGVINVLPGSGAITGTAISEH 846
E +P + A ++ G FPPGV+N++PG G G AIS H
Sbjct: 196 EQTPLTALHVASLIKEAG---FPPGVVNIVPGYGPTAGAAISSH 236
>sp|Q8HYE4|AL1A1_MACFA Retinal dehydrogenase 1 (RalDH1) (RALDH 1) (Aldehyde dehydrogenase
family 1 member A1) (Aldehyde dehydrogenase, cytosolic)
(ALHDII) (ALDH-E1)
Length = 501
Score = 174 bits (442), Expect = 2e-43
Identities = 91/197 (46%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Frame = +2
Query: 194 QLFINNEFVDSESGKDYETKNPADESVICRVSFSSXXXXXXXXXXXXXXFEYGE-WGKMN 370
++FINNE+ DS SGK + NPA E +C+V F+ G W M+
Sbjct: 22 KIFINNEWHDSVSGKKFPVFNPATEEELCQVEEGDKADVDKAVKAARQAFQIGSPWRTMD 81
Query: 371 ARERGRIMYKLADLLEKHAEELATLESLDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQ 550
A ERGR++YKLADL+E+ LAT+ES++ G +Y+ A + I+T RY AGW DKIQ
Sbjct: 82 ASERGRLLYKLADLIERDRLLLATMESMNGGKLYSNAYLNDLAGCIKTLRYCAGWADKIQ 141
Query: 551 GSVIPISNARPNKNLSITKKEPIGVCGIITPWNYPLMMLAWKMAACLAAGNTVVMKPAQV 730
G IPI + T+ EPIGVCG I PWN+PL+ML WK+ L+ GNTVV+KPA+
Sbjct: 142 GRTIPIDG----NFFTYTRHEPIGVCGQIIPWNFPLVMLIWKIGPALSCGNTVVVKPAEQ 197
Query: 731 TPLTSLKFCEFVVEAGF 781
TPLT+L + EAGF
Sbjct: 198 TPLTALHVASLIKEAGF 214
Score = 37.4 bits (85), Expect = 0.053
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 715 ETSPSNTFNFAKVL*IRGRSWFPPGVINVLPGSGAITGTAISEH 846
E +P + A ++ G FPPGV+N++PG G G AIS H
Sbjct: 196 EQTPLTALHVASLIKEAG---FPPGVVNIVPGYGPTAGAAISSH 236
>sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 (RalDH1) (RALDH 1) (Aldehyde dehydrogenase
family 1 member A1) (Aldehyde dehydrogenase, cytosolic)
(ALHDII) (ALDH-E1)
Length = 509
Score = 172 bits (437), Expect = 8e-43
Identities = 88/197 (44%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Frame = +2
Query: 194 QLFINNEFVDSESGKDYETKNPADESVICRVSFSSXXXXXXXXXXXXXXFEYGE-WGKMN 370
++FINNE+ DS SGK +E NPA+E IC V+ FE G W M+
Sbjct: 30 KIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSPWRTMD 89
Query: 371 ARERGRIMYKLADLLEKHAEELATLESLDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQ 550
A ERGR++ KLADL+E+ LAT+E++D G +++ A +G I+T RY AGW DKI
Sbjct: 90 ASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADKIH 149
Query: 551 GSVIPISNARPNKNLSITKKEPIGVCGIITPWNYPLMMLAWKMAACLAAGNTVVMKPAQV 730
G +P+ + T+ EP+GVCG I PWN+PL+M WK+A L GNTVV+KPA+
Sbjct: 150 GRTVPMDG----NFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQ 205
Query: 731 TPLTSLKFCEFVVEAGF 781
TPL++L + EAGF
Sbjct: 206 TPLSALYMGSLIKEAGF 222
Score = 37.0 bits (84), Expect = 0.069
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 778 FPPGVINVLPGSGAITGTAISEH 846
FPPGV+N++PG G G AIS H
Sbjct: 222 FPPGVVNIVPGFGPTAGAAISHH 244
>sp|Q8MI17|AL1A1_RABIT Retinal dehydrogenase 1 (RalDH1) (RALDH 1) (Aldehyde dehydrogenase
family 1 member A1) (Aldehyde dehydrogenase, cytosolic)
(ALHDII) (ALDH-E1)
Length = 496
Score = 171 bits (432), Expect = 3e-42
Identities = 88/197 (44%), Positives = 119/197 (60%), Gaps = 1/197 (0%)
Frame = +2
Query: 194 QLFINNEFVDSESGKDYETKNPADESVICRVSFSSXXXXXXXXXXXXXXFEYGE-WGKMN 370
++FINNE+ DS SGK + NPA E IC + F+ G W M+
Sbjct: 17 KIFINNEWHDSVSGKKFPVLNPATEEQICLIEEGDKADVDKAVKAARQAFQIGSPWRTMD 76
Query: 371 ARERGRIMYKLADLLEKHAEELATLESLDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQ 550
A ERGR++YKLADL+E+ LAT+ESL++G ++ A +G I+T RY AGW DKIQ
Sbjct: 77 ASERGRLLYKLADLIERDRLLLATMESLNAGKLFPNAYLMDLGGCIKTLRYCAGWADKIQ 136
Query: 551 GSVIPISNARPNKNLSITKKEPIGVCGIITPWNYPLMMLAWKMAACLAAGNTVVMKPAQV 730
G +P+ T+ EP+GVCG I PWN+PL+ML WK+ L+ GNTV++KPA+
Sbjct: 137 GRTMPMDG----DFFCYTRHEPVGVCGQIIPWNFPLVMLIWKIGPALSCGNTVIVKPAEQ 192
Query: 731 TPLTSLKFCEFVVEAGF 781
TPLT+L + EAGF
Sbjct: 193 TPLTALHVASLIKEAGF 209
Score = 37.4 bits (85), Expect = 0.053
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 715 ETSPSNTFNFAKVL*IRGRSWFPPGVINVLPGSGAITGTAISEH 846
E +P + A ++ G FPPGV+N++PG G G AIS H
Sbjct: 191 EQTPLTALHVASLIKEAG---FPPGVVNIVPGYGPTAGAAISSH 231
>sp|P51647|AL1A1_RAT Retinal dehydrogenase 1 (RalDH1) (RALDH 1) (Aldehyde dehydrogenase
family 1 member A1) (Aldehyde dehydrogenase, cytosolic)
(ALHDII) (ALDH-E1)
Length = 501
Score = 170 bits (431), Expect = 4e-42
Identities = 88/197 (44%), Positives = 118/197 (59%), Gaps = 1/197 (0%)
Frame = +2
Query: 194 QLFINNEFVDSESGKDYETKNPADESVICRVSFSSXXXXXXXXXXXXXXFEYGE-WGKMN 370
++FINNE+ DS SGK + NPA E VIC V F+ G W M+
Sbjct: 22 KIFINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMD 81
Query: 371 ARERGRIMYKLADLLEKHAEELATLESLDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQ 550
A ERGR++ KLADL+E+ LAT+E+++ G V+ A + +G SI+ +Y AGW DKI
Sbjct: 82 ASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKIH 141
Query: 551 GSVIPISNARPNKNLSITKKEPIGVCGIITPWNYPLMMLAWKMAACLAAGNTVVMKPAQV 730
G IP + T++EPIGVCG I PWN+PL+M WK+ L+ GNTVV+KPA+
Sbjct: 142 GQTIPSDG----DIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQ 197
Query: 731 TPLTSLKFCEFVVEAGF 781
TPLT+L + EAGF
Sbjct: 198 TPLTALHMASLIKEAGF 214
Score = 37.7 bits (86), Expect = 0.041
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 715 ETSPSNTFNFAKVL*IRGRSWFPPGVINVLPGSGAITGTAISEH 846
E +P + A ++ G FPPGV+N++PG G G AIS H
Sbjct: 196 EQTPLTALHMASLIKEAG---FPPGVVNIVPGYGPTAGAAISSH 236
>sp|Q9JHW9|AL1A3_MOUSE Aldehyde dehydrogenase 1A3 (Aldehyde dehydrogenase 6)
(Retinaldehyde dehydrogenase 3) (RALDH-3)
Length = 512
Score = 170 bits (431), Expect = 4e-42
Identities = 86/197 (43%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Frame = +2
Query: 194 QLFINNEFVDSESGKDYETKNPADESVICRVSFSSXXXXXXXXXXXXXXFEYGE-WGKMN 370
++FINN++ +S+SG+ + T NP+ IC V F+ G W +++
Sbjct: 33 KIFINNDWHESKSGRKFATYNPSTLEKICEVEEGDKPDVDKAVEAAQAAFQRGSPWRRLD 92
Query: 371 ARERGRIMYKLADLLEKHAEELATLESLDSGAVYTLALKTHVGMSIETFRYFAGWCDKIQ 550
A RG+++++LADL+E+ LATLE++D+G + A + I+TFRYFAGW DKIQ
Sbjct: 93 ALSRGQLLHQLADLVERDRAILATLETMDTGKPFLHAFFVDLEGCIKTFRYFAGWADKIQ 152
Query: 551 GSVIPISNARPNKNLSITKKEPIGVCGIITPWNYPLMMLAWKMAACLAAGNTVVMKPAQV 730
G IP + + T+ EPIGVCG ITPWN+PL+MLAWK+A L GNTVV+KPA+
Sbjct: 153 GRTIPTDD----NVVCFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQ 208
Query: 731 TPLTSLKFCEFVVEAGF 781
TPLT+L + E GF
Sbjct: 209 TPLTALYLASLIKEVGF 225
Score = 37.0 bits (84), Expect = 0.069
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 778 FPPGVINVLPGSGAITGTAISEH 846
FPPGV+N++PG G G AIS H
Sbjct: 225 FPPGVVNIVPGFGPTVGAAISSH 247
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,638,626
Number of Sequences: 369166
Number of extensions: 2216276
Number of successful extensions: 6334
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6163
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8341863645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)