Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_J05
(571 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P13868|CALM1_SOLTU Calmodulin-1 (CaM-1) 116 4e-26
sp|P27161|CALM_LYCES Calmodulin (CaM) 114 1e-25
sp|P84339|CALM_AGABI Calmodulin (CaM) 113 3e-25
sp|Q8X187|CALM_PAXIN Calmodulin (CaM) 113 4e-25
sp|Q7DMN9|CALM5_SOLTU Calmodulin-5/6/7/8 (CaM-5/6/7/8) 112 8e-25
sp|P93087|CALM_CAPAN Calmodulin (CaM) 112 8e-25
sp|P27163|CALM2_PETHY Calmodulin-2 (CaM-2) 112 8e-25
sp|Q7DMP0|CALM2_SOLTU Calmodulin-2/4 (CaM-2/4) 111 1e-24
sp|O94739|CALM_PLEOS Calmodulin (CaM) 111 1e-24
sp|P11120|CALM_PLECO Calmodulin (CaM) 111 1e-24
>sp|P13868|CALM1_SOLTU Calmodulin-1 (CaM-1)
Length = 149
Score = 116 bits (290), Expect = 4e-26
Identities = 61/127 (48%), Positives = 88/127 (69%)
Frame = +2
Query: 2 NGYIDKQELLRMCHSLGEYPSDSQLDIMISKADTLNRDGQIEFDEFVNFMKSNAVKHRSR 181
+G I +EL + SLG+ P++++L MIS+AD +++G I+F EF+N M + +K
Sbjct: 25 DGCITTKELGTVMRSLGQNPTEAELQDMISEADA-DQNGTIDFPEFLNLM-ARKMKDTDS 82
Query: 182 SEDMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
E++K AFKVFDKD NG I ELR M NLGE LT+ E+D MI+EAD DGDG ++++EF
Sbjct: 83 EEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 362 SKMFLAE 382
+M LA+
Sbjct: 143 VRMMLAK 149
Score = 62.0 bits (149), Expect = 1e-09
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = +2
Query: 188 DMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
+ K AF +FDKDG+G I +EL M +LG+ TEAEL MI EAD D +G I F EF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEADADQNGTIDFPEF 69
>sp|P27161|CALM_LYCES Calmodulin (CaM)
Length = 149
Score = 114 bits (286), Expect = 1e-25
Identities = 60/127 (47%), Positives = 87/127 (68%)
Frame = +2
Query: 2 NGYIDKQELLRMCHSLGEYPSDSQLDIMISKADTLNRDGQIEFDEFVNFMKSNAVKHRSR 181
+G I +EL + SLG+ P++++L MIS+ D +++G I+F EF+N M + +K
Sbjct: 25 DGCITTKELGTVMRSLGQNPTEAELQDMISEVDA-DQNGTIDFPEFLNLM-ARKMKDTDS 82
Query: 182 SEDMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
E++K AFKVFDKD NG I ELR M NLGE LT+ E+D MI+EAD DGDG ++++EF
Sbjct: 83 EEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
Query: 362 SKMFLAE 382
+M LA+
Sbjct: 143 VRMMLAK 149
Score = 60.5 bits (145), Expect = 3e-09
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = +2
Query: 188 DMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
+ K AF +FDKDG+G I +EL M +LG+ TEAEL MI E D D +G I F EF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQNGTIDFPEF 69
>sp|P84339|CALM_AGABI Calmodulin (CaM)
Length = 148
Score = 113 bits (283), Expect = 3e-25
Identities = 60/127 (47%), Positives = 87/127 (68%)
Frame = +2
Query: 2 NGYIDKQELLRMCHSLGEYPSDSQLDIMISKADTLNRDGQIEFDEFVNFMKSNAVKHRSR 181
+G I +EL + SLG+ PS ++L+ MI++ D + +G I+F EF+ M + ++
Sbjct: 24 DGTITTKELGTVMRSLGQNPSQAELEDMINEVDA-DGNGTIDFPEFLTMM-ARKMRDTDS 81
Query: 182 SEDMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
E++K AFKVFDKDGNG I ELR M NLGE LT++E+D MI+EAD DGDG I+++EF
Sbjct: 82 EEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQINYEEF 141
Query: 362 SKMFLAE 382
KM L++
Sbjct: 142 VKMMLSK 148
Score = 62.4 bits (150), Expect = 8e-10
Identities = 30/61 (49%), Positives = 40/61 (65%)
Frame = +2
Query: 188 DMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEFSK 367
+ K AF +FDKDG+G I +EL M +LG+ ++AEL+ MI E D DG+G I F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADGNGTIDFPEFLT 70
Query: 368 M 370
M
Sbjct: 71 M 71
>sp|Q8X187|CALM_PAXIN Calmodulin (CaM)
Length = 149
Score = 113 bits (282), Expect = 4e-25
Identities = 60/127 (47%), Positives = 85/127 (66%)
Frame = +2
Query: 2 NGYIDKQELLRMCHSLGEYPSDSQLDIMISKADTLNRDGQIEFDEFVNFMKSNAVKHRSR 181
+G I +EL + SLG+ P++ +L MI++ D + +G I+F EF+ M + ++
Sbjct: 25 DGTITTKELGTVMRSLGQNPTEGELQDMINEVDA-DGNGTIDFPEFLTMM-ARKMRDTDS 82
Query: 182 SEDMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
E++K AFKVFDKDGNG I ELR M NLGE LT+ E+D MI+EAD DGDG I++DEF
Sbjct: 83 EEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDEF 142
Query: 362 SKMFLAE 382
KM L++
Sbjct: 143 VKMMLSK 149
Score = 62.8 bits (151), Expect = 6e-10
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = +2
Query: 188 DMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEFSK 367
+ K AF +FDKDG+G I +EL M +LG+ TE EL MI E D DG+G I F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLT 71
Query: 368 M 370
M
Sbjct: 72 M 72
>sp|Q7DMN9|CALM5_SOLTU Calmodulin-5/6/7/8 (CaM-5/6/7/8)
Length = 149
Score = 112 bits (279), Expect = 8e-25
Identities = 59/127 (46%), Positives = 86/127 (67%)
Frame = +2
Query: 2 NGYIDKQELLRMCHSLGEYPSDSQLDIMISKADTLNRDGQIEFDEFVNFMKSNAVKHRSR 181
+G I +EL + SLG+ P++++L MI++ D + +G I+F EF+N M + +K
Sbjct: 25 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDA-DGNGTIDFPEFLNLM-ARKMKDTDS 82
Query: 182 SEDMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
E++K AF+VFDKD NG I ELR M NLGE LT+ E+D MI+EAD DGDG I++DEF
Sbjct: 83 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEF 142
Query: 362 SKMFLAE 382
K+ +A+
Sbjct: 143 VKVMMAK 149
Score = 63.5 bits (153), Expect = 3e-10
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = +2
Query: 188 DMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
+ K AF +FDKDG+G I +EL M +LG+ TEAEL MI E D DG+G I F EF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>sp|P93087|CALM_CAPAN Calmodulin (CaM)
Length = 149
Score = 112 bits (279), Expect = 8e-25
Identities = 59/127 (46%), Positives = 86/127 (67%)
Frame = +2
Query: 2 NGYIDKQELLRMCHSLGEYPSDSQLDIMISKADTLNRDGQIEFDEFVNFMKSNAVKHRSR 181
+G I +EL + SLG+ P++++L MI++ D + +G I+F EF+N M + +K
Sbjct: 25 DGCITTKELGTVMRSLGQNPTEAELQDMINEVDA-DGNGTIDFPEFLNLM-ARKMKDTDS 82
Query: 182 SEDMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
E++K AF+VFDKD NG I ELR M NLGE LT+ E+D MI+EAD DGDG I++DEF
Sbjct: 83 EEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEF 142
Query: 362 SKMFLAE 382
K+ +A+
Sbjct: 143 VKVMMAK 149
Score = 63.5 bits (153), Expect = 3e-10
Identities = 31/58 (53%), Positives = 38/58 (65%)
Frame = +2
Query: 188 DMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
+ K AF +FDKDG+G I +EL M +LG+ TEAEL MI E D DG+G I F EF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>sp|P27163|CALM2_PETHY Calmodulin-2 (CaM-2)
Length = 149
Score = 112 bits (279), Expect = 8e-25
Identities = 58/127 (45%), Positives = 87/127 (68%)
Frame = +2
Query: 2 NGYIDKQELLRMCHSLGEYPSDSQLDIMISKADTLNRDGQIEFDEFVNFMKSNAVKHRSR 181
+G I +EL + SLG+ P++++L MIS+ D +++G I+F EF+N M + +K
Sbjct: 25 DGCITTKELGTVMRSLGQNPTEAELQDMISEVDA-DQNGTIDFPEFLNLM-ARKMKDTDS 82
Query: 182 SEDMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
E++K AFKVFDKD NG I ++R M NLGE LT+ E+D MI+EAD DGDG ++++EF
Sbjct: 83 EEELKEAFKVFDKDQNGYISAADVRHVMTNLGEKLTDEEVDEMIREADMDGDGQVNYEEF 142
Query: 362 SKMFLAE 382
+M LA+
Sbjct: 143 VRMMLAK 149
Score = 60.5 bits (145), Expect = 3e-09
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = +2
Query: 188 DMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
+ K AF +FDKDG+G I +EL M +LG+ TEAEL MI E D D +G I F EF
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMISEVDADQNGTIDFPEF 69
>sp|Q7DMP0|CALM2_SOLTU Calmodulin-2/4 (CaM-2/4)
Length = 124
Score = 111 bits (278), Expect = 1e-24
Identities = 59/126 (46%), Positives = 85/126 (67%)
Frame = +2
Query: 5 GYIDKQELLRMCHSLGEYPSDSQLDIMISKADTLNRDGQIEFDEFVNFMKSNAVKHRSRS 184
G I +EL + SLG+ P++++L MI++ D + +G I+F EF+N M + +K
Sbjct: 1 GCITTKELGTVMRSLGQNPTEAELQDMINEVDA-DGNGTIDFPEFLNLM-ARKMKDTDSE 58
Query: 185 EDMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEFS 364
E++K AF+VFDKD NG I ELR M NLGE LT+ E+D MI+EAD DGDG I++DEF
Sbjct: 59 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFV 118
Query: 365 KMFLAE 382
K+ +A+
Sbjct: 119 KVMMAK 124
Score = 43.9 bits (102), Expect = 3e-04
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +2
Query: 2 NGYIDKQELLRMCHSLGEYPSDSQLDIMISKADTLNRDGQIEFDEFVNFM 151
NG+I EL + +LGE +D ++D MI +AD ++ DGQI +DEFV M
Sbjct: 73 NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD-VDGDGQINYDEFVKVM 121
>sp|O94739|CALM_PLEOS Calmodulin (CaM)
Length = 149
Score = 111 bits (277), Expect = 1e-24
Identities = 59/127 (46%), Positives = 86/127 (67%)
Frame = +2
Query: 2 NGYIDKQELLRMCHSLGEYPSDSQLDIMISKADTLNRDGQIEFDEFVNFMKSNAVKHRSR 181
+G I +EL + SLG+ P++++L MI++ D + +G I+F EF+ M + ++
Sbjct: 25 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDA-DGNGTIDFPEFLTMM-ARKMRDTDS 82
Query: 182 SEDMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
E++K AFKVFDKDGNG I ELR M NLGE LT+ E+D MI+EAD DGDG I+++EF
Sbjct: 83 EEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADVDGDGQINYEEF 142
Query: 362 SKMFLAE 382
KM L++
Sbjct: 143 VKMMLSK 149
Score = 64.3 bits (155), Expect = 2e-10
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +2
Query: 188 DMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEFSK 367
+ K AF +FDKDG+G I +EL M +LG+ TEAEL MI E D DG+G I F EF
Sbjct: 12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 368 M 370
M
Sbjct: 72 M 72
>sp|P11120|CALM_PLECO Calmodulin (CaM)
Length = 148
Score = 111 bits (277), Expect = 1e-24
Identities = 59/127 (46%), Positives = 86/127 (67%)
Frame = +2
Query: 2 NGYIDKQELLRMCHSLGEYPSDSQLDIMISKADTLNRDGQIEFDEFVNFMKSNAVKHRSR 181
+G I +EL + SLG+ P++++L MI++ D + +G I+F EF+ M + ++
Sbjct: 24 DGTITTKELGTVMRSLGQNPTEAELQDMINEVDA-DGNGTIDFPEFLTMM-ARKMRDTDS 81
Query: 182 SEDMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEF 361
E++K AFKVFDKDGNG I ELR M NLGE LT+ E+D MI+EAD DGDG I+++EF
Sbjct: 82 EEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDNEVDEMIREADIDGDGQINYEEF 141
Query: 362 SKMFLAE 382
KM L++
Sbjct: 142 VKMMLSK 148
Score = 64.3 bits (155), Expect = 2e-10
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +2
Query: 188 DMKAAFKVFDKDGNGIIDREELRFAMENLGEVLTEAELDSMIQEADCDGDGLISFDEFSK 367
+ K AF +FDKDG+G I +EL M +LG+ TEAEL MI E D DG+G I F EF
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 368 M 370
M
Sbjct: 71 M 71
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,889,550
Number of Sequences: 369166
Number of extensions: 1060565
Number of successful extensions: 4430
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3982
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4177115900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)