Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_H18
(733 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P17343|GBB1_CAEEL Guanine nucleotide-binding protein bet... 271 1e-72
sp|P26308|GBB1_DROME Guanine nucleotide-binding protein bet... 270 2e-72
sp|P23232|GBB_LOLFO Guanine nucleotide-binding protein beta... 270 3e-72
sp|O45040|GBB1_HOMAM Guanine nucleotide-binding protein G(I... 268 8e-72
sp|Q08706|GBB_LYMST Guanine nucleotide-binding protein beta... 266 5e-71
sp|P79959|GBB1_XENLA Guanine nucleotide-binding protein G(I... 263 4e-70
sp|Q6PH57|GBB1_BRARE Guanine nucleotide-binding protein G(I... 261 1e-69
sp|Q9HAV0|GBB4_HUMAN Guanine nucleotide-binding protein bet... 260 2e-69
sp|P54311|GBB1_RAT Guanine nucleotide-binding protein G(I)/... 259 5e-69
sp|Q6TMK6|GBB1_CRIGR Guanine nucleotide-binding protein G(I... 259 5e-69
>sp|P17343|GBB1_CAEEL Guanine nucleotide-binding protein beta subunit 1
sp|Q61ZF6|GBB1_CAEBR Guanine nucleotide-binding protein beta subunit 1
Length = 340
Score = 271 bits (693), Expect = 1e-72
Identities = 121/138 (87%), Positives = 132/138 (95%)
Frame = +2
Query: 2 ACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIG 181
ACDASAKLWD+RDG CKQTFPGHESDINA+ FFP+G AFATGSDDATCRLFDIRADQE+
Sbjct: 203 ACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRLFDIRADQELA 262
Query: 182 MFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSE 361
M+SHDNIICGITSVAFSKSGRLL GYDDFNCNVWD+++Q+RAGVLAGHDNRVSCLGV+E
Sbjct: 263 MYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTE 322
Query: 362 DGMAVCTGSWDSFLRIWN 415
DGMAVCTGSWDSFL+IWN
Sbjct: 323 DGMAVCTGSWDSFLKIWN 340
Score = 38.1 bits (87), Expect = 0.024
Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 1/137 (0%)
Frame = +2
Query: 8 DASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIGMF 187
D +WD P S + + P+G A G D C ++ ++ +
Sbjct: 76 DGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSFVACGGLDNICSIYSLKTREGNVRV 135
Query: 188 SHD-NIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSED 364
S + G S ++ D C +WD + GH V L +S D
Sbjct: 136 SRELPGHTGYLSCCRFLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPD 195
Query: 365 GMAVCTGSWDSFLRIWN 415
+G+ D+ ++W+
Sbjct: 196 FRTFISGACDASAKLWD 212
>sp|P26308|GBB1_DROME Guanine nucleotide-binding protein beta subunit 1
Length = 340
Score = 270 bits (691), Expect = 2e-72
Identities = 121/138 (87%), Positives = 133/138 (96%)
Frame = +2
Query: 2 ACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIG 181
ACDASAKLWD+R+G CKQTFPGHESDINA+TFFPNGQAFATGSDDATCRLFDIRADQE+
Sbjct: 203 ACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQELA 262
Query: 182 MFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSE 361
M+SHDNIICGITSVAFSKSGRLLL GYDDFNCNVWDT+K +R+G+LAGHDNRVSCLGV+E
Sbjct: 263 MYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTE 322
Query: 362 DGMAVCTGSWDSFLRIWN 415
+GMAV TGSWDSFLR+WN
Sbjct: 323 NGMAVATGSWDSFLRVWN 340
Score = 34.7 bits (78), Expect = 0.27
Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 2/138 (1%)
Frame = +2
Query: 8 DASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIGMF 187
D +WD P S + + P+G A G D C +++++ +
Sbjct: 76 DGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTREGNVRV 135
Query: 188 SHDNIICG--ITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSE 361
S + G ++ F +++ D +C +WD + GH V L ++
Sbjct: 136 SRELPGHGGYLSCCRFLDDNQIVTSS-GDMSCGLWDIETGLQVTSFLGHTGDVMALSLAP 194
Query: 362 DGMAVCTGSWDSFLRIWN 415
+G+ D+ ++W+
Sbjct: 195 QCKTFVSGACDASAKLWD 212
>sp|P23232|GBB_LOLFO Guanine nucleotide-binding protein beta subunit
Length = 341
Score = 270 bits (690), Expect = 3e-72
Identities = 126/138 (91%), Positives = 133/138 (96%)
Frame = +2
Query: 2 ACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIG 181
ACDASAKL+D+RDG CKQTF GHESDINAIT+FPNG AFATGSDDATCRLFDIRADQEIG
Sbjct: 204 ACDASAKLFDIRDGICKQTFTGHESDINAITYFPNGFAFATGSDDATCRLFDIRADQEIG 263
Query: 182 MFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSE 361
M+SHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWD LKQ+RAGVLAGHDNRVSCLGV+E
Sbjct: 264 MYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDVLKQERAGVLAGHDNRVSCLGVTE 323
Query: 362 DGMAVCTGSWDSFLRIWN 415
DGMAV TGSWDSFL+IWN
Sbjct: 324 DGMAVATGSWDSFLKIWN 341
>sp|O45040|GBB1_HOMAM Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 268 bits (686), Expect = 8e-72
Identities = 120/138 (86%), Positives = 132/138 (95%)
Frame = +2
Query: 2 ACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIG 181
ACDASAKLWD+RDG C+QTFPGHESDINA+TFFPNG AFATGSDDATCRLFDIRADQE+
Sbjct: 203 ACDASAKLWDIRDGMCRQTFPGHESDINAVTFFPNGHAFATGSDDATCRLFDIRADQELA 262
Query: 182 MFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSE 361
M+SHDNIICGITSVAFSKSG+LLL GYDDFNCNVWD+++ +RAGVLAGHDNRVSCLGV+E
Sbjct: 263 MYSHDNIICGITSVAFSKSGKLLLAGYDDFNCNVWDSMRTERAGVLAGHDNRVSCLGVTE 322
Query: 362 DGMAVCTGSWDSFLRIWN 415
DGMAV TGSWDSFL+IWN
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 35.4 bits (80), Expect = 0.16
Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 1/137 (0%)
Frame = +2
Query: 8 DASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIGMF 187
D +WD P S + + P+G A G D C ++ ++ +
Sbjct: 76 DGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNICSIYSLKTREGNVRV 135
Query: 188 SHD-NIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSED 364
S + G S ++ D C +WD + GH V L +S +
Sbjct: 136 SRELPGHTGYLSCCRFVDDNQIVTSSGDMTCALWDIETGQQCTQFTGHTGDVMSLSLSPN 195
Query: 365 GMAVCTGSWDSFLRIWN 415
+G+ D+ ++W+
Sbjct: 196 MRTFTSGACDASAKLWD 212
>sp|Q08706|GBB_LYMST Guanine nucleotide-binding protein beta subunit
Length = 341
Score = 266 bits (679), Expect = 5e-71
Identities = 123/138 (89%), Positives = 129/138 (93%)
Frame = +2
Query: 2 ACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIG 181
ACDASAKLWD+RDG CKQTF GHESDINAIT+FPNG AFATGSDDATCRLFDIRADQEIG
Sbjct: 204 ACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDATCRLFDIRADQEIG 263
Query: 182 MFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSE 361
M+SHDNIICGITSVAFSKSGRLLLG YDDFNCNVWD LKQ+ GVLAGHDNRVSCLGV+E
Sbjct: 264 MYSHDNIICGITSVAFSKSGRLLLGRYDDFNCNVWDVLKQETHGVLAGHDNRVSCLGVTE 323
Query: 362 DGMAVCTGSWDSFLRIWN 415
DG AV TGSWDSFL+IWN
Sbjct: 324 DGSAVATGSWDSFLKIWN 341
Score = 36.2 bits (82), Expect = 0.092
Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 1/137 (0%)
Frame = +2
Query: 8 DASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIGMF 187
D +WD P S + + P+G A G D C ++ ++ +
Sbjct: 77 DGKLIVWDGYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRV 136
Query: 188 SHD-NIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSED 364
S + G S ++ D +C +WD + GH V L S D
Sbjct: 137 SRELPGHTGYLSCCRFIDDNSIVTSSGDMSCALWDIETGQQTTSFTGHTGDVMSLSTSPD 196
Query: 365 GMAVCTGSWDSFLRIWN 415
+G+ D+ ++W+
Sbjct: 197 FRTFVSGACDASAKLWD 213
>sp|P79959|GBB1_XENLA Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1) (XGbeta1)
Length = 340
Score = 263 bits (672), Expect = 4e-70
Identities = 120/138 (86%), Positives = 130/138 (94%)
Frame = +2
Query: 2 ACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIG 181
ACDASAKLWD+R+G C+QTF GHESDINAI FFPNG AFATGSDDATCRLFD+RADQE+
Sbjct: 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 182 MFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSE 361
++SHDNIICGITSVAFSKSGRLLL GYDDFNCNVWDTLK DRAGVLAGHDNRVSCLGV++
Sbjct: 263 VYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTD 322
Query: 362 DGMAVCTGSWDSFLRIWN 415
DGMAV TGSWDSFL+IWN
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 38.9 bits (89), Expect = 0.014
Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 1/137 (0%)
Frame = +2
Query: 8 DASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIGMF 187
D +WD P S + + P+G A G D C +++++ +
Sbjct: 76 DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICPIYNLKTREGNVRV 135
Query: 188 SHDNI-ICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSED 364
S + G S ++ D C +WD + GH V L ++ D
Sbjct: 136 SRELAGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 365 GMAVCTGSWDSFLRIWN 415
+G+ D+ ++W+
Sbjct: 196 SRCFVSGACDASAKLWD 212
>sp|Q6PH57|GBB1_BRARE Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 261 bits (667), Expect = 1e-69
Identities = 119/138 (86%), Positives = 129/138 (93%)
Frame = +2
Query: 2 ACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIG 181
ACDASAKLWD+R+G C+QTF GHESDINAI FFPNG AFATGSDDATCRLFD+RADQE+
Sbjct: 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 182 MFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSE 361
++SHDNIICGITSVAFSKSGRLLL GYDDFNCNVWD LK DRAGVLAGHDNRVSCLGV++
Sbjct: 263 VYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD 322
Query: 362 DGMAVCTGSWDSFLRIWN 415
DGMAV TGSWDSFL+IWN
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 39.3 bits (90), Expect = 0.011
Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 1/137 (0%)
Frame = +2
Query: 8 DASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIGMF 187
D +WD P S + + P+G A G D C +++++ +
Sbjct: 76 DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV 135
Query: 188 SHDNI-ICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSED 364
S + G S ++ D C +WD + AGH V L ++ D
Sbjct: 136 SRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD 195
Query: 365 GMAVCTGSWDSFLRIWN 415
+G+ D+ ++W+
Sbjct: 196 TRLFVSGACDASAKLWD 212
>sp|Q9HAV0|GBB4_HUMAN Guanine nucleotide-binding protein beta subunit 4 (Transducin beta
chain 4)
Length = 340
Score = 260 bits (665), Expect = 2e-69
Identities = 118/138 (85%), Positives = 130/138 (94%)
Frame = +2
Query: 2 ACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIG 181
ACDAS+KLWD+RDG C+Q+F GH SDINA++FFPNG AFATGSDDATCRLFD+RADQE+
Sbjct: 203 ACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELL 262
Query: 182 MFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSE 361
++SHDNIICGITSVAFSKSGRLLL GYDDFNCNVWDTLK DRAGVLAGHDNRVSCLGV++
Sbjct: 263 LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTD 322
Query: 362 DGMAVCTGSWDSFLRIWN 415
DGMAV TGSWDSFLRIWN
Sbjct: 323 DGMAVATGSWDSFLRIWN 340
Score = 38.5 bits (88), Expect = 0.019
Identities = 27/137 (19%), Positives = 49/137 (35%), Gaps = 1/137 (0%)
Frame = +2
Query: 8 DASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIGMF 187
D +WD P S + + P+G A G D C +++++ +
Sbjct: 76 DGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV 135
Query: 188 SHD-NIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSED 364
S + G S ++ D C +WD + GH V L +S D
Sbjct: 136 SRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPD 195
Query: 365 GMAVCTGSWDSFLRIWN 415
+G+ D+ ++W+
Sbjct: 196 MRTFVSGACDASSKLWD 212
>sp|P54311|GBB1_RAT Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62874|GBB1_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62873|GBB1_HUMAN Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62872|GBB1_CANFA Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62871|GBB1_BOVIN Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 259 bits (662), Expect = 5e-69
Identities = 118/138 (85%), Positives = 128/138 (92%)
Frame = +2
Query: 2 ACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIG 181
ACDASAKLWD+R+G C+QTF GHESDINAI FFPNG AFATGSDDATCRLFD+RADQE+
Sbjct: 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 182 MFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSE 361
+SHDNIICGITSV+FSKSGRLLL GYDDFNCNVWD LK DRAGVLAGHDNRVSCLGV++
Sbjct: 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD 322
Query: 362 DGMAVCTGSWDSFLRIWN 415
DGMAV TGSWDSFL+IWN
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 37.7 bits (86), Expect = 0.032
Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 1/137 (0%)
Frame = +2
Query: 8 DASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIGMF 187
D +WD P S + + P+G A G D C +++++ +
Sbjct: 76 DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV 135
Query: 188 SHDNI-ICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSED 364
S + G S ++ D C +WD + GH V L ++ D
Sbjct: 136 SRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 365 GMAVCTGSWDSFLRIWN 415
+G+ D+ ++W+
Sbjct: 196 TRLFVSGACDASAKLWD 212
>sp|Q6TMK6|GBB1_CRIGR Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 259 bits (662), Expect = 5e-69
Identities = 118/138 (85%), Positives = 128/138 (92%)
Frame = +2
Query: 2 ACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIG 181
ACDASAKLWD+R+G C+QTF GHESDINAI FFPNG AFATGSDDATCRLFD+RADQE+
Sbjct: 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262
Query: 182 MFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSE 361
+SHDNIICGITSV+FSKSGRLLL GYDDFNCNVWD LK DRAGVLAGHDNRVSCLGV++
Sbjct: 263 TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD 322
Query: 362 DGMAVCTGSWDSFLRIWN 415
DGMAV TGSWDSFL+IWN
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
Score = 39.3 bits (90), Expect = 0.011
Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 1/137 (0%)
Frame = +2
Query: 8 DASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRLFDIRADQEIGMF 187
D +WD P S + + P+G A G D C +++++ +
Sbjct: 76 DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV 135
Query: 188 SHDNI-ICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHDNRVSCLGVSED 364
S + G S + ++ +D C +WD + GH V L ++ D
Sbjct: 136 SRELAGHTGYLSCCRFLNDNQIVTSSEDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 365 GMAVCTGSWDSFLRIWN 415
+G+ D+ ++W+
Sbjct: 196 TRLFVSGACDASAKLWD 212
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,788,053
Number of Sequences: 369166
Number of extensions: 1474188
Number of successful extensions: 5984
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5005
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6534486000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)