Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_H14
(973 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 227 4e-59
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 221 3e-57
sp|Q9R014|CATJ_MOUSE Cathepsin J precursor (Cathepsin P) (C... 213 7e-55
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 211 3e-54
sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine protei... 211 3e-54
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 209 7e-54
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 209 9e-54
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 208 2e-53
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 207 5e-53
sp|O35186|CATK_RAT Cathepsin K precursor 206 1e-52
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor
Length = 326
Score = 227 bits (578), Expect = 4e-59
Identities = 113/295 (38%), Positives = 166/295 (56%), Gaps = 6/295 (2%)
Frame = +2
Query: 65 WEDYKTIFNKKYSDETDLIRRNIWEENMEFIKQHNLQFDLGKTKFSVGLNEFSDMNQIEF 244
W +K ++NK+Y+ D RRNIWE+N++ I++HNL+ DLG +++GLN+F+DM EF
Sbjct: 21 WHQWKRMYNKEYNGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEF 80
Query: 245 QSNILSVXXXXXXXXXXXXXXXXXXLSRNDFITT------PNNIKLPDSWDWREKGAVSP 406
++ L+ +SR I + NN +PD DWRE G V+
Sbjct: 81 KAKYLT------------------EMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTE 122
Query: 407 VGNQRNNSCGYAFAAAGALEGQNFNLTKTLEILSKQQIIDCSVYYGNSGCYGGILSKAYA 586
V +Q N +AF+ G +EGQ +T S+QQ++DCS +GN+GC GG++ AY
Sbjct: 123 VKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQ 182
Query: 587 YLADYGSELDEDYPFVKCNSNCKYDKSLATVKPYGFKYVSRGKEADLMNAVYNIGPISAA 766
YL +G E + YP+ C+Y+K L K G+ V G E +L N V P + A
Sbjct: 183 YLKQFGLETESSYPYTAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVA 242
Query: 767 IDASPTSFKQYKTGIYDDTSCSSNNVNHAVLVIGYGEESGQSFWIIKNSWGSKWG 931
+D + F Y++GIY +CS VNHAVL +GYG + G +WI+KNSWG+ WG
Sbjct: 243 VDVE-SDFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWG 296
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 221 bits (562), Expect = 3e-57
Identities = 119/315 (37%), Positives = 172/315 (54%), Gaps = 5/315 (1%)
Frame = +2
Query: 2 SFVLNNASRIDSNVNSQLNKDWEDYKTIFNKKYSDETDLIRRNIWEENMEFIKQHNLQFD 181
+F L AS + + L+ W +K + Y + RR +WE+NM+ I+ HN ++
Sbjct: 9 AFCLGIASAVPK-FDQNLDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYS 67
Query: 182 LGKTKFSVGLNEFSDMNQIEFQSNILSVXXXXXXXXXXXXXXXXXXLSRNDFITTPNNIK 361
GK F++ +N F DM EF+ + + P +
Sbjct: 68 QGKHGFTMAMNAFGDMTNEEFRQMM--------------GCFRNQKFRKGKVFREPLFLD 113
Query: 362 LPDSWDWREKGAVSPVGNQRNNSCGYAFAAAGALEGQNFNLTKTLEILSKQQIIDCSVYY 541
LP S DWR+KG V+PV NQ+ +AF+A GALEGQ F T L LS+Q ++DCS
Sbjct: 114 LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQ 173
Query: 542 GNSGCYGGILSKAYAYLADYGS-ELDEDYPFVKCNSNCKYDKSLATVKPYGFKYVSRGKE 718
GN GC GG +++A+ Y+ + G + +E YP+V + CKY + GF V+ GKE
Sbjct: 174 GNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKE 233
Query: 719 ADLMNAVYNIGPISAAIDASPTSFKQYKTGIYDDTSCSSNNVNHAVLVIGYGEESGQS-- 892
LM AV +GPIS A+DA +SF+ YK+GIY + CSS N++H VLV+GYG E S
Sbjct: 234 KALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNN 293
Query: 893 --FWIIKNSWGSKWG 931
+W++KNSWG +WG
Sbjct: 294 SKYWLVKNSWGPEWG 308
>sp|Q9R014|CATJ_MOUSE Cathepsin J precursor (Cathepsin P) (Catlrp-p)
Length = 333
Score = 213 bits (542), Expect = 7e-55
Identities = 125/305 (40%), Positives = 172/305 (56%), Gaps = 10/305 (3%)
Frame = +2
Query: 50 QLNKDWEDYKTIFNKKYSDETDLIRRNIWEENMEFIKQHNLQFDLGKTKFSVGLNEFSDM 229
+L+ +W+D+KT + K YS E + +RR +WEENM IK HN + LGK F++ +N+F D
Sbjct: 24 KLDAEWKDWKTKYAKSYSPE-EALRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQ 82
Query: 230 NQIEFQSNILSVXXXXXXXXXXXXXXXXXXLSRNDFITTPN-----NIKLPDSWDWREKG 394
EF+ +I ++ +T P+ +I LPD DWRE+G
Sbjct: 83 TSEEFRKSIDNIPIPAA-------------------MTDPHAQNHVSIGLPDYKDWREEG 123
Query: 395 AVSPVGNQRNNSCGYAFAAAGALEGQNFNLTKTLEILSKQQIIDCSVYYGNSGCYGGILS 574
V+PV NQ +AFAAAGA+EGQ F T L LS Q ++DCS GN GC G
Sbjct: 124 YVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAH 183
Query: 575 KAYAY-LADYGSELDEDYPFVKCNSNCKYDKSLATVKPYGFKYVSRGKEADLMNAVYNIG 751
+A+ Y L + G E + YP+ + C+Y A+ + + E L AV +IG
Sbjct: 184 QAFEYVLKNKGLEAEATYPYEGKDGPCRYRSENASANITDYVNLP-PNELYLWVAVASIG 242
Query: 752 PISAAIDASPTSFKQYKTGIYDDTSCSSNNVNHAVLVIGYGEE----SGQSFWIIKNSWG 919
P+SAAIDAS SF+ Y GIY + +CSS VNHAVLV+GYG E G ++W+IKNSWG
Sbjct: 243 PVSAAIDASHDSFRFYNGGIYYEPNCSSYFVNHAVLVVGYGSEGDVKDGNNYWLIKNSWG 302
Query: 920 SKWGM 934
+WGM
Sbjct: 303 EEWGM 307
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 211 bits (536), Expect = 3e-54
Identities = 115/299 (38%), Positives = 163/299 (54%), Gaps = 5/299 (1%)
Frame = +2
Query: 53 LNKDWEDYKTIFNKKYSDETDLIRRNIWEENMEFIKQHNLQFDLGKTKFSVGLNEFSDMN 232
L W +K + N+ Y + RR +WE+NM+ I+ HN ++ GK F++ +N F DM
Sbjct: 25 LEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMT 84
Query: 233 QIEFQSNILSVXXXXXXXXXXXXXXXXXXLSRNDFITTPNNIKLPDSWDWREKGAVSPVG 412
EF+ + + P + P S DWREKG V+PV
Sbjct: 85 SEEFRQVMNGFQNRKPR--------------KGKVFQEPLFYEAPRSVDWREKGYVTPVK 130
Query: 413 NQRNNSCGYAFAAAGALEGQNFNLTKTLEILSKQQIIDCSVYYGNSGCYGGILSKAYAYL 592
NQ +AF+A GALEGQ F T L LS+Q ++DCS GN GC GG++ A+ Y+
Sbjct: 131 NQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYV 190
Query: 593 ADYGS-ELDEDYPFVKCNSNCKYDKSLATVKPYGFKYVSRGKEADLMNAVYNIGPISAAI 769
D G + +E YP+ +CKY+ + GF + + ++A LM AV +GPIS AI
Sbjct: 191 QDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKA-LMKAVATVGPISVAI 249
Query: 770 DASPTSFKQYKTGIYDDTSCSSNNVNHAVLVIGYGEESGQS----FWIIKNSWGSKWGM 934
DA SF YK GIY + CSS +++H VLV+GYG ES +S +W++KNSWG +WGM
Sbjct: 250 DAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGM 308
>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
L heavy chain; Cathepsin L light chain]
Length = 341
Score = 211 bits (536), Expect = 3e-54
Identities = 107/296 (36%), Positives = 169/296 (57%), Gaps = 3/296 (1%)
Frame = +2
Query: 59 KDWEDYKTIFNKKYSDETD-LIRRNIWEENMEFIKQHNLQFDLGKTKFSVGLNEFSDMNQ 235
++W +K K Y DET+ R I+ EN I +HN +F GK F + +N+++D+
Sbjct: 27 EEWHTFKLEHRKNYQDETEERFRLKIFNENKHKIAKHNQRFAEGKVSFKLAVNKYADLLH 86
Query: 236 IEFQSNILSVXXXXXXXXXXXXXXXXXXLSRNDFITTPNNIKLPDSWDWREKGAVSPVGN 415
EF+ + FI+ P ++ LP S DWR KGAV+ V +
Sbjct: 87 HEFRQ----LMNGFNYTLHKQLRAADESFKGVTFIS-PAHVTLPKSVDWRTKGAVTAVKD 141
Query: 416 QRNNSCGYAFAAAGALEGQNFNLTKTLEILSKQQIIDCSVYYGNSGCYGGILSKAYAYLA 595
Q + +AF++ GALEGQ+F + L LS+Q ++DCS YGN+GC GG++ A+ Y+
Sbjct: 142 QGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIK 201
Query: 596 DYGS-ELDEDYPFVKCNSNCKYDKSLATVKPYGFKYVSRGKEADLMNAVYNIGPISAAID 772
D G + ++ YP+ + +C ++K GF + +G E + AV +GP+S AID
Sbjct: 202 DNGGIDTEKSYPYEAIDDSCHFNKGTVGATDRGFTDIPQGDEKKMAEAVATVGPVSVAID 261
Query: 773 ASPTSFKQYKTGIYDDTSCSSNNVNHAVLVIGYG-EESGQSFWIIKNSWGSKWGMK 937
AS SF+ Y G+Y++ C + N++H VLV+G+G +ESG+ +W++KNSWG+ WG K
Sbjct: 262 ASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWGTTWGDK 317
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 209 bits (533), Expect = 7e-54
Identities = 112/297 (37%), Positives = 165/297 (55%), Gaps = 5/297 (1%)
Frame = +2
Query: 62 DWEDYKTIFNKKYSDETDLIRRNIWEENMEFIKQHNLQFDLGKTKFSVGLNEFSDMNQIE 241
+W +K+ + Y + RR IWE+NM I+ HN ++ G+ FS+ +N F DM E
Sbjct: 28 EWHQWKSTHRRLYGTNEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEE 87
Query: 242 FQSNILSVXXXXXXXXXXXXXXXXXXLSRNDFITTPNNIKLPDSWDWREKGAVSPVGNQR 421
F+ + + P +K+P S DWREKG V+PV NQ
Sbjct: 88 FRQVVNGYRHQKH--------------KKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQG 133
Query: 422 NNSCGYAFAAAGALEGQNFNLTKTLEILSKQQIIDCSVYYGNSGCYGGILSKAYAYLADY 601
+AF+A+G LEGQ F T L LS+Q ++DCS GN GC GG++ A+ Y+ +
Sbjct: 134 QCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKEN 193
Query: 602 GS-ELDEDYPFVKCNSNCKYDKSLATVKPYGFKYVSRGKEADLMNAVYNIGPISAAIDAS 778
G + +E YP+ + +CKY A GF + + ++A LM AV +GPIS A+DAS
Sbjct: 194 GGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVDIPQQEKA-LMKAVATVGPISVAMDAS 252
Query: 779 PTSFKQYKTGIYDDTSCSSNNVNHAVLVIGYGEESGQS----FWIIKNSWGSKWGMK 937
S + Y +GIY + +CSS N++H VL++GYG E S +W++KNSWGS+WGM+
Sbjct: 253 HPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGME 309
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 209 bits (532), Expect = 9e-54
Identities = 117/313 (37%), Positives = 168/313 (53%), Gaps = 5/313 (1%)
Frame = +2
Query: 8 VLNNASRIDSNVNSQLNKDWEDYKTIFNKKYSDETDLIRRNIWEENMEFIKQHNLQFDLG 187
+ + A + D ++N+Q W +K + Y + RR +WE+NM+ I+ HN ++ G
Sbjct: 14 IASAAPKFDQSLNAQ----WYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQG 69
Query: 188 KTKFSVGLNEFSDMNQIEFQSNILSVXXXXXXXXXXXXXXXXXXLSRNDFITTPNNIKLP 367
K F++ +N F DM EF+ + + P ++P
Sbjct: 70 KHGFTMAMNAFGDMTNEEFRQVMNGFQNQKH--------------KKGKMFQEPLFAEIP 115
Query: 368 DSWDWREKGAVSPVGNQRNNSCGYAFAAAGALEGQNFNLTKTLEILSKQQIIDCSVYYGN 547
S DWREKG V+PV NQ +AF+A GALEGQ F T L LS+Q ++DCS GN
Sbjct: 116 KSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGN 175
Query: 548 SGCYGGILSKAYAYLADYGS-ELDEDYPFV-KCNSNCKYDKSLATVKPYGFKYVSRGKEA 721
GC GG++ A+ Y+ D G + +E YP++ + C Y + GF + + +E
Sbjct: 176 EGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQ-REK 234
Query: 722 DLMNAVYNIGPISAAIDASPTSFKQYKTGIYDDTSCSSNNVNHAVLVIGYGEE---SGQS 892
LM AV +GPIS AIDA SF+ YK+GIY D CSS +++H VLV+GYG E S
Sbjct: 235 ALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNK 294
Query: 893 FWIIKNSWGSKWG 931
FWI+KNSWG +WG
Sbjct: 295 FWIVKNSWGPEWG 307
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 208 bits (530), Expect = 2e-53
Identities = 107/296 (36%), Positives = 166/296 (56%), Gaps = 3/296 (1%)
Frame = +2
Query: 53 LNKDWEDYKTIFNKKYSDETD-LIRRNIWEENMEFIKQHNLQFDLGKTKFSVGLNEFSDM 229
+ ++W YK K Y++E + R I+ EN I +HN F GK + +GLN+++DM
Sbjct: 24 IKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADM 83
Query: 230 NQIEFQSNILSVXXXXXXXXXXXXXXXXXXLSRNDFITTPNNIKLPDSWDWREKGAVSPV 409
EF+ + L +I P ++ +P S DWRE GAV+ V
Sbjct: 84 LHHEFKETM-----NGYNHTLRQLMRERTGLVGATYI-PPAHVTVPKSVDWREHGAVTGV 137
Query: 410 GNQRNNSCGYAFAAAGALEGQNFNLTKTLEILSKQQIIDCSVYYGNSGCYGGILSKAYAY 589
+Q + +AF++ GALEGQ+F L LS+Q ++DCS YGN+GC GG++ A+ Y
Sbjct: 138 KDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAFRY 197
Query: 590 LADYGS-ELDEDYPFVKCNSNCKYDKSLATVKPYGFKYVSRGKEADLMNAVYNIGPISAA 766
+ D G + ++ YP+ + +C ++K+ GF + G E + AV +GP+S A
Sbjct: 198 IKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVA 257
Query: 767 IDASPTSFKQYKTGIYDDTSCSSNNVNHAVLVIGYG-EESGQSFWIIKNSWGSKWG 931
IDAS SF+ Y G+Y++ C N++H VLV+GYG +ESG +W++KNSWG+ WG
Sbjct: 258 IDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTTWG 313
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 207 bits (526), Expect = 5e-53
Identities = 118/314 (37%), Positives = 169/314 (53%), Gaps = 6/314 (1%)
Frame = +2
Query: 8 VLNNASRIDSNVNSQLNKDWEDYKTIFNKKYSDETDLIRRNIWEENMEFIKQHNLQFDLG 187
+ + A ++D N L+ DW +K + Y + RR +WE+NM+ I+ HN ++ G
Sbjct: 14 IASAAPKLDQN----LDADWYKWKATHGRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQG 69
Query: 188 KTKFSVGLNEFSDMNQIEFQSNILSVXXXXXXXXXXXXXXXXXXLSRNDFITTPNNIKLP 367
K FS+ +N F DM EF+ + + +++P
Sbjct: 70 KHGFSMAMNAFGDMTNEEFRQVMNGFQNQKH--------------KKGKVFHESLVLEVP 115
Query: 368 DSWDWREKGAVSPVGNQRNNSCGYAFAAAGALEGQNFNLTKTLEILSKQQIIDCSVYYGN 547
S DWREKG V+ V NQ +AF+A GALEGQ F T L LS+Q ++DCS GN
Sbjct: 116 KSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGN 175
Query: 548 SGCYGGILSKAYAYLADYGS-ELDEDYPFVKCNSN-CKYDKSLATVKPYGFKYVSRGKEA 721
GC GG++ A+ Y+ D G + +E YP++ +N C Y + GF + + +E
Sbjct: 176 QGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQ-REK 234
Query: 722 DLMNAVYNIGPISAAIDASPTSFKQYKTGIYDDTSCSSNNVNHAVLVIGYGEESGQS--- 892
LM AV +GPIS AIDA +SF+ YK+GIY D CSS +++H VLV+GYG E S
Sbjct: 235 ALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSS 294
Query: 893 -FWIIKNSWGSKWG 931
FWI+KNSWG +WG
Sbjct: 295 KFWIVKNSWGPEWG 308
>sp|O35186|CATK_RAT Cathepsin K precursor
Length = 329
Score = 206 bits (523), Expect = 1e-52
Identities = 116/298 (38%), Positives = 163/298 (54%), Gaps = 3/298 (1%)
Frame = +2
Query: 53 LNKDWEDYKTIFNKKYSDETDLI-RRNIWEENMEFIKQHNLQFDLGKTKFSVGLNEFSDM 229
L+ WE +K K+Y+ + D I RR IWE+N++ I HNL+ LG + + +N DM
Sbjct: 22 LDTQWELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEASLGAHTYELAMNHLGDM 81
Query: 230 NQIEFQSNILSVXXXXXXXXXXXXXXXXXXLSRNDFITTPN-NIKLPDSWDWREKGAVSP 406
E + + ND + TP ++PDS D+R+KG V+P
Sbjct: 82 TSEEVVQKMTGLRVPPSRSFS------------NDTLYTPEWEGRVPDSIDYRKKGYVTP 129
Query: 407 VGNQRNNSCGYAFAAAGALEGQNFNLTKTLEILSKQQIIDCSVYYGNSGCYGGILSKAYA 586
V NQ +AF++AGALEGQ T L LS Q ++DC N GC GG ++ A+
Sbjct: 130 VKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDC--VSENYGCGGGYMTTAFQ 187
Query: 587 YLADYGSELDED-YPFVKCNSNCKYDKSLATVKPYGFKYVSRGKEADLMNAVYNIGPISA 763
Y+ G ED YP+V + +C Y+ + K G++ + G E L AV +GP+S
Sbjct: 188 YVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSV 247
Query: 764 AIDASPTSFKQYKTGIYDDTSCSSNNVNHAVLVIGYGEESGQSFWIIKNSWGSKWGMK 937
+IDAS TSF+ Y G+Y D +C +NVNHAVLV+GYG + G +WIIKNSWG WG K
Sbjct: 248 SIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNK 305
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,499,128
Number of Sequences: 369166
Number of extensions: 1815596
Number of successful extensions: 5729
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5278
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10144071740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)