Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_G15
(816 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 505 e-143
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 505 e-143
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 505 e-143
sp|P02554|TBB_PIG Tubulin beta chain 502 e-142
sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin cla... 501 e-142
sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin) 501 e-141
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 500 e-141
sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin) 500 e-141
sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin) 499 e-141
sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15) 499 e-141
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 505 bits (1301), Expect = e-143
Identities = 246/271 (90%), Positives = 251/271 (92%)
Frame = +2
Query: 2 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGA 181
GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGA
Sbjct: 38 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 97
Query: 182 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 361
GNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 362 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 541
EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL 217
Query: 542 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 721
TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 722 CQQYRALTVPELTQQMFDAKNMMAACDPRHG 814
QQYRALTVPELTQQMFDAKNMMAACDPRHG
Sbjct: 278 SQQYRALTVPELTQQMFDAKNMMAACDPRHG 308
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 505 bits (1301), Expect = e-143
Identities = 246/271 (90%), Positives = 251/271 (92%)
Frame = +2
Query: 2 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGA 181
GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGA
Sbjct: 38 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 97
Query: 182 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 361
GNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 362 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 541
EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL 217
Query: 542 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 721
TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 722 CQQYRALTVPELTQQMFDAKNMMAACDPRHG 814
QQYRALTVPELTQQMFDAKNMMAACDPRHG
Sbjct: 278 SQQYRALTVPELTQQMFDAKNMMAACDPRHG 308
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 505 bits (1301), Expect = e-143
Identities = 246/271 (90%), Positives = 251/271 (92%)
Frame = +2
Query: 2 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGA 181
GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGA
Sbjct: 38 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 97
Query: 182 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 361
GNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 362 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 541
EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL 217
Query: 542 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 721
TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 722 CQQYRALTVPELTQQMFDAKNMMAACDPRHG 814
QQYRALTVPELTQQMFDAKNMMAACDPRHG
Sbjct: 278 SQQYRALTVPELTQQMFDAKNMMAACDPRHG 308
>sp|P02554|TBB_PIG Tubulin beta chain
Length = 445
Score = 502 bits (1292), Expect = e-142
Identities = 244/271 (90%), Positives = 249/271 (91%)
Frame = +2
Query: 2 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGA 181
GDSDLQLERINVYYNEA G KYVPRA+LVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGA
Sbjct: 38 GDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 97
Query: 182 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 361
GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 362 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 541
EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL 217
Query: 542 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 721
TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 722 CQQYRALTVPELTQQMFDAKNMMAACDPRHG 814
QQYRALTVPELTQQMFDAKNMMAACDPRHG
Sbjct: 278 SQQYRALTVPELTQQMFDAKNMMAACDPRHG 308
>sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin class-II)
Length = 445
Score = 501 bits (1291), Expect = e-142
Identities = 243/271 (89%), Positives = 250/271 (92%)
Frame = +2
Query: 2 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGA 181
GDSDLQLERINVYYNEATG KYVPRA+LVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGA
Sbjct: 38 GDSDLQLERINVYYNEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 97
Query: 182 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 361
GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 362 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 541
EYPDRIMNTFSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL
Sbjct: 158 EYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL 217
Query: 542 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 721
TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 722 CQQYRALTVPELTQQMFDAKNMMAACDPRHG 814
QQYRALTVPELTQQMFD+KNMMAACDPRHG
Sbjct: 278 SQQYRALTVPELTQQMFDSKNMMAACDPRHG 308
>sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin)
Length = 447
Score = 501 bits (1289), Expect = e-141
Identities = 243/271 (89%), Positives = 250/271 (92%)
Frame = +2
Query: 2 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGA 181
GDSDLQLERINVYYNEA+GGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGA
Sbjct: 38 GDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 97
Query: 182 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 361
GNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 362 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 541
EYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL
Sbjct: 158 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL 217
Query: 542 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 721
TTPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 722 CQQYRALTVPELTQQMFDAKNMMAACDPRHG 814
QQYRALTVPELTQQMFDAKNMMAACDPRHG
Sbjct: 278 SQQYRALTVPELTQQMFDAKNMMAACDPRHG 308
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 500 bits (1288), Expect = e-141
Identities = 242/271 (89%), Positives = 251/271 (92%)
Frame = +2
Query: 2 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGA 181
GDSDLQL+RI+VYYNEATGGKYVPRA+LVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGA
Sbjct: 38 GDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 97
Query: 182 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 361
GNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 362 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 541
EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL 217
Query: 542 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 721
TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 722 CQQYRALTVPELTQQMFDAKNMMAACDPRHG 814
QQYRALTVPELTQQ+FDAKNMMAACDPRHG
Sbjct: 278 SQQYRALTVPELTQQVFDAKNMMAACDPRHG 308
>sp|P13602|TBB2_XENLA Tubulin beta-2 chain (Beta-2 tubulin)
Length = 443
Score = 500 bits (1287), Expect = e-141
Identities = 242/271 (89%), Positives = 250/271 (92%)
Frame = +2
Query: 2 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGA 181
GDSDLQLERINVYYNEATG K+VPRA+LVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGA
Sbjct: 38 GDSDLQLERINVYYNEATGNKFVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 97
Query: 182 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 361
GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 362 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 541
EYPDRIMNTFSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL
Sbjct: 158 EYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL 217
Query: 542 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 721
TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 722 CQQYRALTVPELTQQMFDAKNMMAACDPRHG 814
QQYRALTVPELTQQMFD+KNMMAACDPRHG
Sbjct: 278 SQQYRALTVPELTQQMFDSKNMMAACDPRHG 308
>sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin)
Length = 445
Score = 499 bits (1286), Expect = e-141
Identities = 243/271 (89%), Positives = 250/271 (92%)
Frame = +2
Query: 2 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGA 181
GD++LQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVR+G FGQ+FRPDNF+FGQSGA
Sbjct: 38 GDNELQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGAFGQIFRPDNFVFGQSGA 97
Query: 182 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 361
GNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 362 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 541
EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL
Sbjct: 158 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL 217
Query: 542 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 721
TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 722 CQQYRALTVPELTQQMFDAKNMMAACDPRHG 814
QQYRALTVPELTQQMFDAKNMMAACDPRHG
Sbjct: 278 SQQYRALTVPELTQQMFDAKNMMAACDPRHG 308
>sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15)
Length = 445
Score = 499 bits (1286), Expect = e-141
Identities = 242/271 (89%), Positives = 249/271 (91%)
Frame = +2
Query: 2 GDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFGQSGA 181
GDSDLQLERINVYYNEA G KYVPRA+LVDLEPGTMDSVR+GPFGQ+FRPDNF+FGQSGA
Sbjct: 38 GDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 97
Query: 182 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIRE 361
GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ KIRE
Sbjct: 98 GNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIRE 157
Query: 362 EYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKL 541
EYPDRIMNTFSV+PSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL
Sbjct: 158 EYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKL 217
Query: 542 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 721
TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG
Sbjct: 218 TTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRG 277
Query: 722 CQQYRALTVPELTQQMFDAKNMMAACDPRHG 814
QQYRALTVPELTQQMFD+KNMMAACDPRHG
Sbjct: 278 SQQYRALTVPELTQQMFDSKNMMAACDPRHG 308
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,137,295
Number of Sequences: 369166
Number of extensions: 1746015
Number of successful extensions: 4948
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4521
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7811456130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)