Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_G11
(892 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P02993|EF1A_ARTSA Elongation factor 1-alpha (EF-1-alpha) 496 e-140
sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alph... 495 e-140
sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alp... 494 e-139
sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alp... 494 e-139
sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic fo... 493 e-139
sp|Q92005|EF1A_BRARE Elongation factor 1-alpha (EF-1-alpha) 493 e-139
sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alp... 492 e-139
sp|P05303|EF12_DROME Elongation factor 1-alpha (EF-1-alpha) 491 e-139
sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha) 489 e-138
sp|Q26487|EF1A_SPOFR Elongation factor 1-alpha (EF-1-alpha) 489 e-138
>sp|P02993|EF1A_ARTSA Elongation factor 1-alpha (EF-1-alpha)
Length = 462
Score = 496 bits (1276), Expect = e-140
Identities = 236/297 (79%), Positives = 266/297 (89%)
Frame = +1
Query: 1 ALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGTGEFEAGISKNGQTRE 180
ALWKFET K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG GEFEAGISKNGQTRE
Sbjct: 76 ALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTRE 135
Query: 181 HALLAYTLGVKQMIVGVNKMDSTEPPFSESRFNEIRKEVSSYLKKVGYQPDGVAFVPISG 360
HALLAYTLGVKQ+IVGVNKMDSTEPPFSE+RF EI+KEVS+Y+KK+GY P VAFVPISG
Sbjct: 136 HALLAYTLGVKQLIVGVNKMDSTEPPFSEARFEEIKKEVSAYIKKIGYNPAAVAFVPISG 195
Query: 361 WNGDNMIEESSNMSWYKGWDITRKNAKKEETKITGKTLLDALDSLEPPSRPTNKPLRLPL 540
W+GDNM+E S + WYKGW+I RK E K GKTLLDALD++ PPSRPT KPLRLPL
Sbjct: 196 WHGDNMLEASDRLPWYKGWNIERK-----EGKADGKTLLDALDAILPPSRPTEKPLRLPL 250
Query: 541 QDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGF 720
QDVYKIGGIGTVPVGRVETGI+KPGM+VTFAP +TTEVKSVEMHHE+L +A PGDNVGF
Sbjct: 251 QDVYKIGGIGTVPVGRVETGIIKPGMIVTFAPANITTEVKSVEMHHESLEQASPGDNVGF 310
Query: 721 NIKNVSVKEIRRGNVCSDSKSDPARQATDFIAQVIIMNHPGEIHSGYSPVLDCHTAH 891
N+KNVSVKE+RRG V SDSK++PAR + DF AQVI++NHPG+I +GY+PVLDCHTAH
Sbjct: 311 NVKNVSVKELRRGYVASDSKNNPARGSQDFFAQVIVLNHPGQISNGYTPVLDCHTAH 367
>sp|Q90835|EF1A_CHICK Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor Tu)
(EF-Tu)
Length = 462
Score = 495 bits (1274), Expect = e-140
Identities = 234/297 (78%), Positives = 267/297 (89%)
Frame = +1
Query: 1 ALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGTGEFEAGISKNGQTRE 180
+LWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG GEFEAGISKNGQTRE
Sbjct: 76 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTRE 135
Query: 181 HALLAYTLGVKQMIVGVNKMDSTEPPFSESRFNEIRKEVSSYLKKVGYQPDGVAFVPISG 360
HALLAYTLGVKQ+IVGVNKMDSTEPP+S+ R+ EI KEVS+Y+KK+GY PD VAFVPISG
Sbjct: 136 HALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISG 195
Query: 361 WNGDNMIEESSNMSWYKGWDITRKNAKKEETKITGKTLLDALDSLEPPSRPTNKPLRLPL 540
WNGDNM+E SSNM W+KGW +TRK+ +G TLL+ALD + PP+RPT+KPLRLPL
Sbjct: 196 WNGDNMLEPSSNMPWFKGWKVTRKDG-----NASGTTLLEALDCILPPTRPTDKPLRLPL 250
Query: 541 QDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGF 720
QDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGF
Sbjct: 251 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGF 310
Query: 721 NIKNVSVKEIRRGNVCSDSKSDPARQATDFIAQVIIMNHPGEIHSGYSPVLDCHTAH 891
N+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I +GY+PVLDCHTAH
Sbjct: 311 NVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAH 367
>sp|P10126|EF1A1_MOUSE Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62630|EF1A1_RAT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P62629|EF1A1_CRIGR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 494 bits (1271), Expect = e-139
Identities = 233/297 (78%), Positives = 267/297 (89%)
Frame = +1
Query: 1 ALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGTGEFEAGISKNGQTRE 180
+LWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG GEFEAGISKNGQTRE
Sbjct: 76 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTRE 135
Query: 181 HALLAYTLGVKQMIVGVNKMDSTEPPFSESRFNEIRKEVSSYLKKVGYQPDGVAFVPISG 360
HALLAYTLGVKQ+IVGVNKMDSTEPP+S+ R+ EI KEVS+Y+KK+GY PD VAFVPISG
Sbjct: 136 HALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISG 195
Query: 361 WNGDNMIEESSNMSWYKGWDITRKNAKKEETKITGKTLLDALDSLEPPSRPTNKPLRLPL 540
WNGDNM+E S+NM W+KGW +TRK+ +G TLL+ALD + PP+RPT+KPLRLPL
Sbjct: 196 WNGDNMLEPSANMPWFKGWKVTRKDG-----SASGTTLLEALDCILPPTRPTDKPLRLPL 250
Query: 541 QDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGF 720
QDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGF
Sbjct: 251 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGF 310
Query: 721 NIKNVSVKEIRRGNVCSDSKSDPARQATDFIAQVIIMNHPGEIHSGYSPVLDCHTAH 891
N+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I +GY+PVLDCHTAH
Sbjct: 311 NVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAH 367
>sp|P68105|EF1A1_RABIT Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q5R1X2|EF1A1_PANTR Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68103|EF1A1_BOVIN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|P68104|EF1A1_HUMAN Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
sp|Q66RN5|EF1A1_FELCA Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 494 bits (1271), Expect = e-139
Identities = 233/297 (78%), Positives = 267/297 (89%)
Frame = +1
Query: 1 ALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGTGEFEAGISKNGQTRE 180
+LWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG GEFEAGISKNGQTRE
Sbjct: 76 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTRE 135
Query: 181 HALLAYTLGVKQMIVGVNKMDSTEPPFSESRFNEIRKEVSSYLKKVGYQPDGVAFVPISG 360
HALLAYTLGVKQ+IVGVNKMDSTEPP+S+ R+ EI KEVS+Y+KK+GY PD VAFVPISG
Sbjct: 136 HALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISG 195
Query: 361 WNGDNMIEESSNMSWYKGWDITRKNAKKEETKITGKTLLDALDSLEPPSRPTNKPLRLPL 540
WNGDNM+E S+NM W+KGW +TRK+ +G TLL+ALD + PP+RPT+KPLRLPL
Sbjct: 196 WNGDNMLEPSANMPWFKGWKVTRKDG-----NASGTTLLEALDCILPPTRPTDKPLRLPL 250
Query: 541 QDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGF 720
QDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHHEAL+EALPGDNVGF
Sbjct: 251 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGF 310
Query: 721 NIKNVSVKEIRRGNVCSDSKSDPARQATDFIAQVIIMNHPGEIHSGYSPVLDCHTAH 891
N+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I +GY+PVLDCHTAH
Sbjct: 311 NVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAH 367
>sp|P13549|EF1A0_XENLA Elongation factor 1-alpha, somatic form (EF-1-alpha-S)
Length = 462
Score = 493 bits (1268), Expect = e-139
Identities = 234/297 (78%), Positives = 266/297 (89%)
Frame = +1
Query: 1 ALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGTGEFEAGISKNGQTRE 180
+LWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG GEFEAGISKNGQTRE
Sbjct: 76 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTRE 135
Query: 181 HALLAYTLGVKQMIVGVNKMDSTEPPFSESRFNEIRKEVSSYLKKVGYQPDGVAFVPISG 360
HALLAYTLGVKQ+IVG+NKMDSTEPP+S+ R+ EI KEVS+Y+KK+GY PD VAFVPISG
Sbjct: 136 HALLAYTLGVKQLIVGINKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISG 195
Query: 361 WNGDNMIEESSNMSWYKGWDITRKNAKKEETKITGKTLLDALDSLEPPSRPTNKPLRLPL 540
WNGDNM+E S NM W+KGW ITRK E +G TLL+ALD + PPSRPT+KPLRLPL
Sbjct: 196 WNGDNMLEPSPNMPWFKGWKITRK-----EGSGSGTTLLEALDCILPPSRPTDKPLRLPL 250
Query: 541 QDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGF 720
QDVYKIGGIGTVPVGRVETG++KPGMVVTFAP +TTEVKSVEMHHEALTEA+PGDNVGF
Sbjct: 251 QDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGF 310
Query: 721 NIKNVSVKEIRRGNVCSDSKSDPARQATDFIAQVIIMNHPGEIHSGYSPVLDCHTAH 891
N+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I +GY+PVLDCHTAH
Sbjct: 311 NVKNVSVKDVRRGNVAGDSKNDPPMEAGSFTAQVIILNHPGQIGAGYAPVLDCHTAH 367
>sp|Q92005|EF1A_BRARE Elongation factor 1-alpha (EF-1-alpha)
Length = 462
Score = 493 bits (1268), Expect = e-139
Identities = 235/297 (79%), Positives = 265/297 (89%)
Frame = +1
Query: 1 ALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGTGEFEAGISKNGQTRE 180
ALWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VA G GEFEAGISKNGQTRE
Sbjct: 76 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGVGEFEAGISKNGQTRE 135
Query: 181 HALLAYTLGVKQMIVGVNKMDSTEPPFSESRFNEIRKEVSSYLKKVGYQPDGVAFVPISG 360
HALLA+TLGVKQ+IVGVNKMDSTEPP+S++RF EI KEVS+Y+KK+GY P VAFVPISG
Sbjct: 136 HALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVSAYIKKIGYNPASVAFVPISG 195
Query: 361 WNGDNMIEESSNMSWYKGWDITRKNAKKEETKITGKTLLDALDSLEPPSRPTNKPLRLPL 540
W+GDNM+E SSNM W+KGW I RK E +G TLLDALD++ PPSRPT+KPLRLPL
Sbjct: 196 WHGDNMLEASSNMGWFKGWKIERK-----EGNASGTTLLDALDAILPPSRPTDKPLRLPL 250
Query: 541 QDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGF 720
QDVYKIGGIGTVPVGRVETG+LKPGMVVTFAP +TTEVKSVEMHHE+LTEA PGDNVGF
Sbjct: 251 QDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPANVTTEVKSVEMHHESLTEATPGDNVGF 310
Query: 721 NIKNVSVKEIRRGNVCSDSKSDPARQATDFIAQVIIMNHPGEIHSGYSPVLDCHTAH 891
N+KNVSVK+IRRGNV DSK+DP +A +F AQVII+NHPG+I GY+PVLDCHTAH
Sbjct: 311 NVKNVSVKDIRRGNVAGDSKNDPPMEAANFNAQVIILNHPGQISQGYAPVLDCHTAH 367
>sp|Q5R4R8|EF1A1_PONPY Elongation factor 1-alpha 1 (EF-1-alpha-1) (Elongation factor 1
A-1) (eEF1A-1) (Elongation factor Tu) (EF-Tu)
Length = 462
Score = 492 bits (1267), Expect = e-139
Identities = 232/297 (78%), Positives = 267/297 (89%)
Frame = +1
Query: 1 ALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGTGEFEAGISKNGQTRE 180
+LWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAG GEFEAGISKNGQTRE
Sbjct: 76 SLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEFEAGISKNGQTRE 135
Query: 181 HALLAYTLGVKQMIVGVNKMDSTEPPFSESRFNEIRKEVSSYLKKVGYQPDGVAFVPISG 360
HALLAYTLGVKQ+IVGVNKMDSTEPP+S+ R+ EI KEVS+Y+KK+GY PD VAFVPISG
Sbjct: 136 HALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGYNPDTVAFVPISG 195
Query: 361 WNGDNMIEESSNMSWYKGWDITRKNAKKEETKITGKTLLDALDSLEPPSRPTNKPLRLPL 540
WNGDNM+E S+NM W+KGW +TRK+ +G TLL+ALD + PP+RPT+KPLRLPL
Sbjct: 196 WNGDNMLEPSANMPWFKGWKVTRKDG-----NASGTTLLEALDCILPPTRPTDKPLRLPL 250
Query: 541 QDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGF 720
QDVYKIGGIGTVPVGRVETG+LKPG+VVTFAP +TTEVKSVEMHHEAL+EALPGDNVGF
Sbjct: 251 QDVYKIGGIGTVPVGRVETGVLKPGVVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGF 310
Query: 721 NIKNVSVKEIRRGNVCSDSKSDPARQATDFIAQVIIMNHPGEIHSGYSPVLDCHTAH 891
N+KNVSVK++RRGNV DSK+DP +A F AQVII+NHPG+I +GY+PVLDCHTAH
Sbjct: 311 NVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAH 367
>sp|P05303|EF12_DROME Elongation factor 1-alpha (EF-1-alpha)
Length = 462
Score = 491 bits (1265), Expect = e-139
Identities = 233/297 (78%), Positives = 264/297 (88%)
Frame = +1
Query: 1 ALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGTGEFEAGISKNGQTRE 180
ALWKFET+K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAGTGEFEAGISKNGQTRE
Sbjct: 76 ALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 135
Query: 181 HALLAYTLGVKQMIVGVNKMDSTEPPFSESRFNEIRKEVSSYLKKVGYQPDGVAFVPISG 360
HALLA+TLGVKQ+IVGVNKMDSTEPP+SE+R+ EI+KEVSSY+KK+GY P VAFVPISG
Sbjct: 136 HALLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPASVAFVPISG 195
Query: 361 WNGDNMIEESSNMSWYKGWDITRKNAKKEETKITGKTLLDALDSLEPPSRPTNKPLRLPL 540
W+GDNM+E S M W+KGW + RK K E GK L+DALD++ PP RPT+KPLRLPL
Sbjct: 196 WHGDNMLEPSEKMPWFKGWSVERKEGKAE-----GKCLIDALDAILPPQRPTDKPLRLPL 250
Query: 541 QDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGF 720
QDVYKIGGIGTVPVGRVETG+LKPGMVV FAP L TEVKSVEMHHEALTEA+PGDNVGF
Sbjct: 251 QDVYKIGGIGTVPVGRVETGLLKPGMVVNFAPVNLVTEVKSVEMHHEALTEAMPGDNVGF 310
Query: 721 NIKNVSVKEIRRGNVCSDSKSDPARQATDFIAQVIIMNHPGEIHSGYSPVLDCHTAH 891
N+KNVSVKE+RRG V DSK++P R A DF AQVI++NHPG+I +GY+PVLDCHTAH
Sbjct: 311 NVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIANGYTPVLDCHTAH 367
>sp|P27592|EF1A_ONCVO Elongation factor 1-alpha (EF-1-alpha)
Length = 464
Score = 489 bits (1260), Expect = e-138
Identities = 233/297 (78%), Positives = 264/297 (88%)
Frame = +1
Query: 1 ALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGTGEFEAGISKNGQTRE 180
ALWKFET K+Y+T+IDAPGHRDFIKNMITGTSQADCAVLVVA GTGEFEAGISKNGQTRE
Sbjct: 76 ALWKFETPKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTRE 135
Query: 181 HALLAYTLGVKQMIVGVNKMDSTEPPFSESRFNEIRKEVSSYLKKVGYQPDGVAFVPISG 360
HALLA TLGVKQMIV NKMDST+PPFSE+RF E+ EVS+Y+KK+GY P + FVPISG
Sbjct: 136 HALLAQTLGVKQMIVACNKMDSTDPPFSEARFGEVTTEVSNYIKKIGYNPKSIPFVPISG 195
Query: 361 WNGDNMIEESSNMSWYKGWDITRKNAKKEETKITGKTLLDALDSLEPPSRPTNKPLRLPL 540
+NGDNM+E S+NM W+KGW + RK E +TGKTLL+ALDS+ PP RPT+KPLRLPL
Sbjct: 196 FNGDNMLEPSANMPWFKGWSVERK-----EGTMTGKTLLEALDSVVPPQRPTDKPLRLPL 250
Query: 541 QDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGF 720
QDVYKIGGIGTVPVGRVETGILKPGM+VTFAPQ LTTEVKSVEMHHEAL EALPGDNVGF
Sbjct: 251 QDVYKIGGIGTVPVGRVETGILKPGMIVTFAPQNLTTEVKSVEMHHEALQEALPGDNVGF 310
Query: 721 NIKNVSVKEIRRGNVCSDSKSDPARQATDFIAQVIIMNHPGEIHSGYSPVLDCHTAH 891
N+KN+S+K+IRRG+V SDSK+DPA++ F AQVIIMNHPG+I +GY+PVLDCHTAH
Sbjct: 311 NVKNISIKDIRRGSVASDSKNDPAKETKMFTAQVIIMNHPGQISAGYTPVLDCHTAH 367
>sp|Q26487|EF1A_SPOFR Elongation factor 1-alpha (EF-1-alpha)
Length = 413
Score = 489 bits (1259), Expect = e-138
Identities = 231/297 (77%), Positives = 265/297 (89%)
Frame = +1
Query: 1 ALWKFETTKFYVTVIDAPGHRDFIKNMITGTSQADCAVLVVAAGTGEFEAGISKNGQTRE 180
ALWKFET K+YVT+IDAPGHRDFIKNMITGTSQADCAVL+VAAGTGEFEAGISKNGQTRE
Sbjct: 62 ALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 121
Query: 181 HALLAYTLGVKQMIVGVNKMDSTEPPFSESRFNEIRKEVSSYLKKVGYQPDGVAFVPISG 360
HALLA+TLGVKQ+IVGVNKMDSTEPP+SESRF EI+KEVSSY+KK+GY P VAFVPISG
Sbjct: 122 HALLAFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 181
Query: 361 WNGDNMIEESSNMSWYKGWDITRKNAKKEETKITGKTLLDALDSLEPPSRPTNKPLRLPL 540
W+GDNM+E S+ M W+KGW++ RK K E GK L++ALD++ PP+RPT+KPLRLPL
Sbjct: 182 WHGDNMLEASTKMPWFKGWNVERKEGKAE-----GKCLIEALDAILPPARPTDKPLRLPL 236
Query: 541 QDVYKIGGIGTVPVGRVETGILKPGMVVTFAPQGLTTEVKSVEMHHEALTEALPGDNVGF 720
QDVYKIGGIGTVPVGRVETGILKPG +V FAP +TTEVKSVEMHHEAL EA+PGDNVGF
Sbjct: 237 QDVYKIGGIGTVPVGRVETGILKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGF 296
Query: 721 NIKNVSVKEIRRGNVCSDSKSDPARQATDFIAQVIIMNHPGEIHSGYSPVLDCHTAH 891
N+KNVSVKE+RRG V DSK++P + A DF AQVI++NHPG+I +GY+PVLDCHTAH
Sbjct: 297 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAH 353
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.315 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,422,902
Number of Sequences: 369166
Number of extensions: 2283257
Number of successful extensions: 6949
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6089
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8934348180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)