Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_G02
(864 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P67962|KC1A_CHICK Casein kinase I, alpha isoform (CKI-al... 149 8e-36
sp|P48729|KC1A_HUMAN Casein kinase I, alpha isoform (CKI-al... 149 8e-36
sp|P67829|KC1A_SHEEP Casein kinase I, alpha isoform (CKI-al... 149 8e-36
sp|P97633|KC1A_RAT Casein kinase I, alpha isoform (CKI-alph... 148 2e-35
sp|P42168|YKL1_CAEEL Putative casein kinase I C03C10.1 in c... 147 3e-35
sp|P42158|KC1D_ARATH Casein kinase I, delta isoform-like (C... 146 6e-35
sp|P40236|HHP2_SCHPO Casein kinase I homolog hhp2 145 1e-34
sp|P40234|CKI2_SCHPO Casein kinase I homolog cki2 144 2e-34
sp|Q6QNM1|KC1_TOXGO Casein kinase I 144 3e-34
sp|P49674|KC1E_HUMAN Casein kinase I, epsilon isoform (CKI-... 144 4e-34
>sp|P67962|KC1A_CHICK Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67963|KC1A_XENLA Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 337
Score = 149 bits (377), Expect = 8e-36
Identities = 74/161 (45%), Positives = 110/161 (68%)
Frame = +1
Query: 46 EFIINKEWRITKKIGAGSFGEIYSCVNVKTNNLAAVKMEKYEPDNWSQLNFEYKILQKLK 225
EFI+ ++++ +KIG+GSFG+IY +N+ AVK+E + + QL +E K+ + L+
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARH-PQLLYESKLYKILQ 68
Query: 226 GNTGFCQIFWYGRDGMQNFYRALVMEQLGPSLDDLHIYCDYKFSVKTVGMLADQMIKRLQ 405
G G I WYG++ Y LVM+ LGPSL+DL +C +F++KTV MLADQMI R++
Sbjct: 69 GGVGIPHIRWYGQE---KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIE 125
Query: 406 NLHQNSLVHRDIKPENFLMGNKENFNTVYLIDFGLSKQYVD 528
+H + +HRDIKP+NFLMG + N ++LIDFGL+K+Y D
Sbjct: 126 YVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRD 166
Score = 131 bits (329), Expect = 3e-30
Identities = 62/105 (59%), Positives = 72/105 (68%)
Frame = +2
Query: 539 KEHIPFRTDKNLTGTARYCSINTHEGYEQSRRDDMESLGHVFVYLIIGRLPWQGLQVENN 718
++HIP+R DKNLTGTARY SIN H G EQSRRDDMESLG+V +Y LPWQGL+
Sbjct: 170 RQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATK 229
Query: 719 EDKFAKIHETKKSISLSELCKSIPKEFQDYLEYCRNLDFKENPDY 853
+ K+ KI E K S + LCK P EF YL YCR L F+E PDY
Sbjct: 230 KQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDY 274
>sp|P48729|KC1A_HUMAN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|Q8BK63|KC1A_MOUSE Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 337
Score = 149 bits (377), Expect = 8e-36
Identities = 74/161 (45%), Positives = 110/161 (68%)
Frame = +1
Query: 46 EFIINKEWRITKKIGAGSFGEIYSCVNVKTNNLAAVKMEKYEPDNWSQLNFEYKILQKLK 225
EFI+ ++++ +KIG+GSFG+IY +N+ AVK+E + + QL +E K+ + L+
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARH-PQLLYESKLYKILQ 68
Query: 226 GNTGFCQIFWYGRDGMQNFYRALVMEQLGPSLDDLHIYCDYKFSVKTVGMLADQMIKRLQ 405
G G I WYG++ Y LVM+ LGPSL+DL +C +F++KTV MLADQMI R++
Sbjct: 69 GGVGIPHIRWYGQE---KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIE 125
Query: 406 NLHQNSLVHRDIKPENFLMGNKENFNTVYLIDFGLSKQYVD 528
+H + +HRDIKP+NFLMG + N ++LIDFGL+K+Y D
Sbjct: 126 YVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRD 166
Score = 131 bits (329), Expect = 3e-30
Identities = 62/105 (59%), Positives = 72/105 (68%)
Frame = +2
Query: 539 KEHIPFRTDKNLTGTARYCSINTHEGYEQSRRDDMESLGHVFVYLIIGRLPWQGLQVENN 718
++HIP+R DKNLTGTARY SIN H G EQSRRDDMESLG+V +Y LPWQGL+
Sbjct: 170 RQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATK 229
Query: 719 EDKFAKIHETKKSISLSELCKSIPKEFQDYLEYCRNLDFKENPDY 853
+ K+ KI E K S + LCK P EF YL YCR L F+E PDY
Sbjct: 230 KQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDY 274
>sp|P67829|KC1A_SHEEP Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67828|KC1A_RABIT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
sp|P67827|KC1A_BOVIN Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 325
Score = 149 bits (377), Expect = 8e-36
Identities = 74/161 (45%), Positives = 110/161 (68%)
Frame = +1
Query: 46 EFIINKEWRITKKIGAGSFGEIYSCVNVKTNNLAAVKMEKYEPDNWSQLNFEYKILQKLK 225
EFI+ ++++ +KIG+GSFG+IY +N+ AVK+E + + QL +E K+ + L+
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARH-PQLLYESKLYKILQ 68
Query: 226 GNTGFCQIFWYGRDGMQNFYRALVMEQLGPSLDDLHIYCDYKFSVKTVGMLADQMIKRLQ 405
G G I WYG++ Y LVM+ LGPSL+DL +C +F++KTV MLADQMI R++
Sbjct: 69 GGVGIPHIRWYGQE---KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIE 125
Query: 406 NLHQNSLVHRDIKPENFLMGNKENFNTVYLIDFGLSKQYVD 528
+H + +HRDIKP+NFLMG + N ++LIDFGL+K+Y D
Sbjct: 126 YVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRD 166
Score = 131 bits (329), Expect = 3e-30
Identities = 62/105 (59%), Positives = 72/105 (68%)
Frame = +2
Query: 539 KEHIPFRTDKNLTGTARYCSINTHEGYEQSRRDDMESLGHVFVYLIIGRLPWQGLQVENN 718
++HIP+R DKNLTGTARY SIN H G EQSRRDDMESLG+V +Y LPWQGL+
Sbjct: 170 RQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATK 229
Query: 719 EDKFAKIHETKKSISLSELCKSIPKEFQDYLEYCRNLDFKENPDY 853
+ K+ KI E K S + LCK P EF YL YCR L F+E PDY
Sbjct: 230 KQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDY 274
>sp|P97633|KC1A_RAT Casein kinase I, alpha isoform (CKI-alpha) (CK1)
Length = 325
Score = 148 bits (374), Expect = 2e-35
Identities = 74/161 (45%), Positives = 109/161 (67%)
Frame = +1
Query: 46 EFIINKEWRITKKIGAGSFGEIYSCVNVKTNNLAAVKMEKYEPDNWSQLNFEYKILQKLK 225
EFI+ ++++ +KIG+GSFG+IY +N+ AVK+E + + QL +E K+ + L+
Sbjct: 10 EFIVGGKYKLVRKIGSGSFGDIYLAINITNGEEVAVKLESQKARH-PQLLYESKLYKILQ 68
Query: 226 GNTGFCQIFWYGRDGMQNFYRALVMEQLGPSLDDLHIYCDYKFSVKTVGMLADQMIKRLQ 405
G G I WYG+ Y LVM+ LGPSL+DL +C +F++KTV MLADQMI R++
Sbjct: 69 GGVGIPHIRWYGQG---KDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMISRIE 125
Query: 406 NLHQNSLVHRDIKPENFLMGNKENFNTVYLIDFGLSKQYVD 528
+H + +HRDIKP+NFLMG + N ++LIDFGL+K+Y D
Sbjct: 126 YVHTKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRD 166
Score = 131 bits (329), Expect = 3e-30
Identities = 62/105 (59%), Positives = 72/105 (68%)
Frame = +2
Query: 539 KEHIPFRTDKNLTGTARYCSINTHEGYEQSRRDDMESLGHVFVYLIIGRLPWQGLQVENN 718
++HIP+R DKNLTGTARY SIN H G EQSRRDDMESLG+V +Y LPWQGL+
Sbjct: 170 RQHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRTSLPWQGLKAATK 229
Query: 719 EDKFAKIHETKKSISLSELCKSIPKEFQDYLEYCRNLDFKENPDY 853
+ K+ KI E K S + LCK P EF YL YCR L F+E PDY
Sbjct: 230 KQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDY 274
>sp|P42168|YKL1_CAEEL Putative casein kinase I C03C10.1 in chromosome III
Length = 341
Score = 147 bits (372), Expect = 3e-35
Identities = 74/164 (45%), Positives = 111/164 (67%)
Frame = +1
Query: 37 NVREFIINKEWRITKKIGAGSFGEIYSCVNVKTNNLAAVKMEKYEPDNWSQLNFEYKILQ 216
+V++FI+ ++++ +KIG+GSFG+IY +NV A+K+E + QL +E K+ +
Sbjct: 6 SVKDFIVATKYKLIRKIGSGSFGDIYVSINVTNGEEVAIKLESNRARH-PQLLYESKVYR 64
Query: 217 KLKGNTGFCQIFWYGRDGMQNFYRALVMEQLGPSLDDLHIYCDYKFSVKTVGMLADQMIK 396
L+G G I WYG + Y LVM+ LGPSL+DL +C +F++KTV MLADQMI
Sbjct: 65 ILQGGVGIPHIRWYGTE---REYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMIG 121
Query: 397 RLQNLHQNSLVHRDIKPENFLMGNKENFNTVYLIDFGLSKQYVD 528
R++ +H + +HRDIKP+NFLMG + N ++LIDFGL+K+Y D
Sbjct: 122 RIEYVHVKNFIHRDIKPDNFLMGIGRHCNKLFLIDFGLAKKYRD 165
Score = 131 bits (329), Expect = 3e-30
Identities = 62/105 (59%), Positives = 72/105 (68%)
Frame = +2
Query: 539 KEHIPFRTDKNLTGTARYCSINTHEGYEQSRRDDMESLGHVFVYLIIGRLPWQGLQVENN 718
+ HIP+R DKNLTGTARY SIN H G EQSRRDDMESLG+V +Y G LPWQGL+
Sbjct: 169 RTHIPYREDKNLTGTARYASINAHLGIEQSRRDDMESLGYVLMYFNRGTLPWQGLKAATK 228
Query: 719 EDKFAKIHETKKSISLSELCKSIPKEFQDYLEYCRNLDFKENPDY 853
+ K+ KI E K + S+ LCK P EF YL Y R L F E+PDY
Sbjct: 229 KQKYEKISEKKMTTSVEHLCKGFPAEFPMYLSYTRGLRFDESPDY 273
>sp|P42158|KC1D_ARATH Casein kinase I, delta isoform-like (CKI-delta)
Length = 450
Score = 146 bits (369), Expect = 6e-35
Identities = 75/158 (47%), Positives = 106/158 (67%)
Frame = +1
Query: 55 INKEWRITKKIGAGSFGEIYSCVNVKTNNLAAVKMEKYEPDNWSQLNFEYKILQKLKGNT 234
+ ++R+ +KIG+GSFGEIY N+ TN A+K+E + + QL +E K+ + L+G T
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIHTNEELAIKLENVKTKH-PQLLYESKLYRILQGGT 63
Query: 235 GFCQIFWYGRDGMQNFYRALVMEQLGPSLDDLHIYCDYKFSVKTVGMLADQMIKRLQNLH 414
G + W+G +G Y LVM+ LGPSL+DL +C K S+K+V MLADQMI R++ H
Sbjct: 64 GVPNVKWFGVEGD---YNVLVMDLLGPSLEDLFNFCSRKLSLKSVLMLADQMINRVEFFH 120
Query: 415 QNSLVHRDIKPENFLMGNKENFNTVYLIDFGLSKQYVD 528
S +HRD+KP+NFLMG N VY+IDFGL+K+Y D
Sbjct: 121 SKSFLHRDLKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158
Score = 131 bits (329), Expect = 3e-30
Identities = 57/104 (54%), Positives = 74/104 (71%)
Frame = +2
Query: 542 EHIPFRTDKNLTGTARYCSINTHEGYEQSRRDDMESLGHVFVYLIIGRLPWQGLQVENNE 721
+HIP+R +KNLTGTARY S+NTH G EQSRRDD+ESLG++ +Y + G LPWQGL+ +
Sbjct: 163 QHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYILMYFLKGSLPWQGLKAGTKK 222
Query: 722 DKFAKIHETKKSISLSELCKSIPKEFQDYLEYCRNLDFKENPDY 853
K+ +I E K S S+ LC+ P EF Y YCR+L F + PDY
Sbjct: 223 QKYERISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDY 266
>sp|P40236|HHP2_SCHPO Casein kinase I homolog hhp2
Length = 400
Score = 145 bits (367), Expect = 1e-34
Identities = 76/158 (48%), Positives = 108/158 (68%)
Frame = +1
Query: 55 INKEWRITKKIGAGSFGEIYSCVNVKTNNLAAVKMEKYEPDNWSQLNFEYKILQKLKGNT 234
I ++RI +KIG+GSFG+IY +N AVK+E + + QL +E+++ LKGN
Sbjct: 8 IGNKYRIGRKIGSGSFGQIYLGLNTVNGEQVAVKLEPLKARH-HQLEYEFRVYNILKGNI 66
Query: 235 GFCQIFWYGRDGMQNFYRALVMEQLGPSLDDLHIYCDYKFSVKTVGMLADQMIKRLQNLH 414
G I W+G + N Y A+VM+ LGPSL+DL YC KF++KTV +LADQ+I R++ +H
Sbjct: 67 GIPTIRWFG---VTNSYNAMVMDLLGPSLEDLFCYCGRKFTLKTVLLLADQLISRIEYVH 123
Query: 415 QNSLVHRDIKPENFLMGNKENFNTVYLIDFGLSKQYVD 528
S +HRDIKP+NFLM K++ N V +IDFGL+K+Y D
Sbjct: 124 SKSFLHRDIKPDNFLM--KKHSNVVTMIDFGLAKKYRD 159
Score = 130 bits (326), Expect = 6e-30
Identities = 60/103 (58%), Positives = 73/103 (70%)
Frame = +2
Query: 545 HIPFRTDKNLTGTARYCSINTHEGYEQSRRDDMESLGHVFVYLIIGRLPWQGLQVENNED 724
HIP+R +KNLTGTARY SINTH G EQSRRDD+ESLG+V +Y G LPWQGLQ + E
Sbjct: 165 HIPYRDNKNLTGTARYASINTHIGIEQSRRDDLESLGYVLLYFCRGSLPWQGLQADTKEQ 224
Query: 725 KFAKIHETKKSISLSELCKSIPKEFQDYLEYCRNLDFKENPDY 853
K+ +I +TK L LCK +P+EF Y+ Y R L F E P+Y
Sbjct: 225 KYQRIRDTKIGTPLEVLCKGLPEEFITYMCYTRQLSFTEKPNY 267
>sp|P40234|CKI2_SCHPO Casein kinase I homolog cki2
Length = 435
Score = 144 bits (364), Expect = 2e-34
Identities = 72/167 (43%), Positives = 111/167 (66%), Gaps = 2/167 (1%)
Frame = +1
Query: 37 NVREFIINKEWRITKKIGAGSFGEIYSCVNVKTNNLAAVKMEKYEPDNWSQLNFEYKILQ 216
N + ++ +R+ +KIG GSFG I+ +N+ N L A+K E + + QL EY+ +
Sbjct: 2 NSQTSVVGVHYRVGRKIGEGSFGVIFDGMNLLNNQLIAIKFEPKKSEA-PQLRDEYRTYK 60
Query: 217 KLKGNTGFCQIFWYGRDGMQNFYRALVMEQLGPSLDDLHIYCDYKFSVKTVGMLADQMIK 396
L GN G ++++G++G+ N LV++ LGPSL+DL +C +FSVKTV M A QM+
Sbjct: 61 LLVGNAGIPNVYYFGQEGLHNI---LVIDLLGPSLEDLFEWCGRRFSVKTVAMTAKQMLS 117
Query: 397 RLQNLHQNSLVHRDIKPENFLMG--NKENFNTVYLIDFGLSKQYVDP 531
R+Q +H+ +LV+RDIKP+NFL+G + N N VY++DFG++K Y DP
Sbjct: 118 RVQTIHEKNLVYRDIKPDNFLIGRPSSRNANMVYMVDFGMAKYYRDP 164
Score = 140 bits (354), Expect = 3e-33
Identities = 64/105 (60%), Positives = 79/105 (75%)
Frame = +2
Query: 539 KEHIPFRTDKNLTGTARYCSINTHEGYEQSRRDDMESLGHVFVYLIIGRLPWQGLQVENN 718
K+HIP+ K+L+GTARY SINTH G EQSRRDD+ESLGHVF+Y + G LPWQGL+ NN
Sbjct: 167 KQHIPYSERKSLSGTARYMSINTHLGREQSRRDDLESLGHVFMYFLRGSLPWQGLKAANN 226
Query: 719 EDKFAKIHETKKSISLSELCKSIPKEFQDYLEYCRNLDFKENPDY 853
+ K+ KI E K+S S+SELC P EF Y+ Y R+L+F E PDY
Sbjct: 227 KHKYEKISEKKQSTSISELCAGFPNEFSKYMTYVRSLEFDEEPDY 271
>sp|Q6QNM1|KC1_TOXGO Casein kinase I
Length = 324
Score = 144 bits (363), Expect = 3e-34
Identities = 71/162 (43%), Positives = 108/162 (66%)
Frame = +1
Query: 46 EFIINKEWRITKKIGAGSFGEIYSCVNVKTNNLAAVKMEKYEPDNWSQLNFEYKILQKLK 225
E + ++R+ +KIG+GSFG+IY N+ T + A+K+E + + QL +E K+ + L
Sbjct: 2 EVRVGGKYRLGRKIGSGSFGDIYIGANILTGDEVAIKLESIKSKH-PQLLYESKLYKLLA 60
Query: 226 GNTGFCQIFWYGRDGMQNFYRALVMEQLGPSLDDLHIYCDYKFSVKTVGMLADQMIKRLQ 405
G G + WYG +G Y +V++ LGPSL+DL C+ K S+KTV MLADQM+ R++
Sbjct: 61 GGIGIPMVHWYGIEGD---YNVMVIDLLGPSLEDLFSICNRKLSLKTVLMLADQMLNRIE 117
Query: 406 NLHQNSLVHRDIKPENFLMGNKENFNTVYLIDFGLSKQYVDP 531
+H + +HRDIKP+NFL+G + + VY+IDFGL+K+Y DP
Sbjct: 118 FVHSKNFIHRDIKPDNFLIGRGKKMSVVYIIDFGLAKKYRDP 159
Score = 131 bits (329), Expect = 3e-30
Identities = 61/105 (58%), Positives = 75/105 (71%)
Frame = +2
Query: 539 KEHIPFRTDKNLTGTARYCSINTHEGYEQSRRDDMESLGHVFVYLIIGRLPWQGLQVENN 718
++HIP+R KNLTGTARY SINTH G EQSRRDD+E+LG+V +Y G LPWQGL+
Sbjct: 162 QQHIPYREGKNLTGTARYASINTHLGIEQSRRDDLEALGYVLMYFNRGSLPWQGLKATTK 221
Query: 719 EDKFAKIHETKKSISLSELCKSIPKEFQDYLEYCRNLDFKENPDY 853
+DK+ KI E K S + LCK P EF YL YCR+L F++ PDY
Sbjct: 222 KDKYDKIMEKKMSTPIEILCKHFPFEFITYLNYCRSLRFEDRPDY 266
>sp|P49674|KC1E_HUMAN Casein kinase I, epsilon isoform (CKI-epsilon) (CKIe)
Length = 416
Score = 144 bits (362), Expect = 4e-34
Identities = 72/161 (44%), Positives = 106/161 (65%)
Frame = +1
Query: 46 EFIINKEWRITKKIGAGSFGEIYSCVNVKTNNLAAVKMEKYEPDNWSQLNFEYKILQKLK 225
E + ++R+ +KIG+GSFG+IY N+ + A+K+E + + QL+ E K + ++
Sbjct: 2 ELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKH-PQLHIESKFYKMMQ 60
Query: 226 GNTGFCQIFWYGRDGMQNFYRALVMEQLGPSLDDLHIYCDYKFSVKTVGMLADQMIKRLQ 405
G G I W G +G Y +VME LGPSL+DL +C KFS+KTV +LADQMI R++
Sbjct: 61 GGVGIPSIKWCGAEGD---YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIE 117
Query: 406 NLHQNSLVHRDIKPENFLMGNKENFNTVYLIDFGLSKQYVD 528
+H + +HRD+KP+NFLMG + N VY+IDFGL+K+Y D
Sbjct: 118 YIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158
Score = 132 bits (331), Expect = 2e-30
Identities = 59/104 (56%), Positives = 73/104 (70%)
Frame = +2
Query: 542 EHIPFRTDKNLTGTARYCSINTHEGYEQSRRDDMESLGHVFVYLIIGRLPWQGLQVENNE 721
+HIP+R +KNLTGTARY SINTH G EQSRRDD+ESLG+V +Y +G LPWQGL+
Sbjct: 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR 222
Query: 722 DKFAKIHETKKSISLSELCKSIPKEFQDYLEYCRNLDFKENPDY 853
K+ +I E K S + LCK P EF YL +CR+L F + PDY
Sbjct: 223 QKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDY 266
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,348,655
Number of Sequences: 369166
Number of extensions: 2156696
Number of successful extensions: 8848
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8171
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)