Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_F22
(938 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5IS68|DCE1_PANTR Glutamate decarboxylase 1 (Glutamate d... 385 e-106
sp|Q99259|DCE1_HUMAN Glutamate decarboxylase 1 (Glutamate d... 384 e-106
sp|P48319|DCE1_PIG Glutamate decarboxylase 1 (Glutamate dec... 383 e-106
sp|P18088|DCE1_RAT Glutamate decarboxylase 1 (Glutamate dec... 382 e-105
sp|P48318|DCE1_MOUSE Glutamate decarboxylase 1 (Glutamate d... 381 e-105
sp|P14748|DCE1_FELCA Glutamate decarboxylase 1 (Glutamate d... 381 e-105
sp|P48320|DCE2_MOUSE Glutamate decarboxylase 2 (Glutamate d... 345 1e-94
sp|Q05683|DCE2_RAT Glutamate decarboxylase 2 (Glutamate dec... 345 1e-94
sp|Q05329|DCE2_HUMAN Glutamate decarboxylase 2 (Glutamate d... 343 3e-94
sp|P48321|DCE2_PIG Glutamate decarboxylase 2 (Glutamate dec... 343 5e-94
>sp|Q5IS68|DCE1_PANTR Glutamate decarboxylase 1 (Glutamate decarboxylase, 67 kDa isoform)
(GAD-67) (67 kDa glutamic acid decarboxylase)
Length = 594
Score = 385 bits (988), Expect = e-106
Identities = 181/307 (58%), Positives = 233/307 (75%), Gaps = 3/307 (0%)
Frame = +3
Query: 3 KTSKVLDFHHPHQLKQAM-AHCMEIPETPKDLEQLLSDCKETLKYCVKTGHSRYFNQISC 179
+++KVLDFHHPHQL + M +E+ + P+ LEQ+L DC++TLKY V+TGH R+FNQ+S
Sbjct: 134 RSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLST 193
Query: 180 GLDAIAVAGEFLTAMANTNMFTYEIAPVFTLMEEVTLQKLRDLIGWSS--GDGIFSPGGT 353
GLD I +AGE+LT+ ANTNMFTYEIAPVF LME++TL+K+R++IGWSS GDGIFSPGG
Sbjct: 194 GLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIIGWSSKDGDGIFSPGGA 253
Query: 354 IANLYAVLAARYAYFPDVKTRGLFDAPRLIIFTSEQAHYSIKRAAIISGFGLNQVKLVKC 533
I+N+Y+++AARY YFP+VKT+G+ P+L++FTSEQ+HYSIK+A GFG + V L+KC
Sbjct: 254 ISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC 313
Query: 534 NERGKMDTXXXXXXXXXXXXXXXXPCMVCSTGGTTVLGAFDPIDEISKICKQFGLWLHVD 713
NERGK+ P V +T GTTV GAFDPI EI+ IC+++ LWLHVD
Sbjct: 314 NERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 373
Query: 714 CAWGSGALLSKSHRYLLKGIENADSVTWNPHKAMAVTLQCSVILFKKESILENCNGLCAD 893
AWG G L+S+ HR+ L GIE A+SVTWNPHK M V LQCS IL K++ IL+ CN +CA
Sbjct: 374 AAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILIKEKGILQGCNQMCAG 433
Query: 894 YLFQKDK 914
YLFQ DK
Sbjct: 434 YLFQPDK 440
>sp|Q99259|DCE1_HUMAN Glutamate decarboxylase 1 (Glutamate decarboxylase, 67 kDa isoform)
(GAD-67) (67 kDa glutamic acid decarboxylase)
Length = 594
Score = 384 bits (986), Expect = e-106
Identities = 180/307 (58%), Positives = 233/307 (75%), Gaps = 3/307 (0%)
Frame = +3
Query: 3 KTSKVLDFHHPHQLKQAM-AHCMEIPETPKDLEQLLSDCKETLKYCVKTGHSRYFNQISC 179
+++KVLDFHHPHQL + M +E+ + P+ LEQ+L DC++TLKY V+TGH R+FNQ+S
Sbjct: 134 RSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLST 193
Query: 180 GLDAIAVAGEFLTAMANTNMFTYEIAPVFTLMEEVTLQKLRDLIGWSS--GDGIFSPGGT 353
GLD I +AGE+LT+ ANTNMFTYEIAPVF LME++TL+K+R+++GWSS GDGIFSPGG
Sbjct: 194 GLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGA 253
Query: 354 IANLYAVLAARYAYFPDVKTRGLFDAPRLIIFTSEQAHYSIKRAAIISGFGLNQVKLVKC 533
I+N+Y+++AARY YFP+VKT+G+ P+L++FTSEQ+HYSIK+A GFG + V L+KC
Sbjct: 254 ISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC 313
Query: 534 NERGKMDTXXXXXXXXXXXXXXXXPCMVCSTGGTTVLGAFDPIDEISKICKQFGLWLHVD 713
NERGK+ P V +T GTTV GAFDPI EI+ IC+++ LWLHVD
Sbjct: 314 NERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 373
Query: 714 CAWGSGALLSKSHRYLLKGIENADSVTWNPHKAMAVTLQCSVILFKKESILENCNGLCAD 893
AWG G L+S+ HR+ L GIE A+SVTWNPHK M V LQCS IL K++ IL+ CN +CA
Sbjct: 374 AAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAG 433
Query: 894 YLFQKDK 914
YLFQ DK
Sbjct: 434 YLFQPDK 440
>sp|P48319|DCE1_PIG Glutamate decarboxylase 1 (Glutamate decarboxylase, 67 kDa isoform)
(GAD-67) (67 kDa glutamic acid decarboxylase)
Length = 594
Score = 383 bits (984), Expect = e-106
Identities = 179/307 (58%), Positives = 232/307 (75%), Gaps = 3/307 (0%)
Frame = +3
Query: 3 KTSKVLDFHHPHQLKQAM-AHCMEIPETPKDLEQLLSDCKETLKYCVKTGHSRYFNQISC 179
+++KVLDFHHPHQL + M +E+ + P+ LEQ+L DC++TLKY V+TGH R+FNQ+S
Sbjct: 134 RSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLST 193
Query: 180 GLDAIAVAGEFLTAMANTNMFTYEIAPVFTLMEEVTLQKLRDLIGWSS--GDGIFSPGGT 353
GLD I +AGE+LT+ ANTNMFTYEIAPVF LME++TL+K+R+++GWS+ GDGIFSPGG
Sbjct: 194 GLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSNKDGDGIFSPGGA 253
Query: 354 IANLYAVLAARYAYFPDVKTRGLFDAPRLIIFTSEQAHYSIKRAAIISGFGLNQVKLVKC 533
I+N+Y+++AARY YFP+VKT+G+ P+L++FTSE +HYSIK+A GFG + V L+KC
Sbjct: 254 ISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKC 313
Query: 534 NERGKMDTXXXXXXXXXXXXXXXXPCMVCSTGGTTVLGAFDPIDEISKICKQFGLWLHVD 713
NERGK+ P V +T GTTV GAFDPI EI+ IC+++ LWLHVD
Sbjct: 314 NERGKIIPADLEAKILEAKQKGYIPLYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 373
Query: 714 CAWGSGALLSKSHRYLLKGIENADSVTWNPHKAMAVTLQCSVILFKKESILENCNGLCAD 893
AWG G L+S+ HR+ L GIE ADSVTWNPHK M V LQCS IL K++ IL+ CN +CA
Sbjct: 374 AAWGGGLLMSRKHRHKLSGIERADSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAG 433
Query: 894 YLFQKDK 914
YLFQ DK
Sbjct: 434 YLFQPDK 440
>sp|P18088|DCE1_RAT Glutamate decarboxylase 1 (Glutamate decarboxylase, 67 kDa isoform)
(GAD-67) (67 kDa glutamic acid decarboxylase)
Length = 593
Score = 382 bits (980), Expect = e-105
Identities = 179/307 (58%), Positives = 232/307 (75%), Gaps = 3/307 (0%)
Frame = +3
Query: 3 KTSKVLDFHHPHQLKQAM-AHCMEIPETPKDLEQLLSDCKETLKYCVKTGHSRYFNQISC 179
+++KVLDFHHPHQL + M +E+ + P+ LEQ+L DC++TLKY V+TGH R+FNQ+S
Sbjct: 133 RSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLST 192
Query: 180 GLDAIAVAGEFLTAMANTNMFTYEIAPVFTLMEEVTLQKLRDLIGWSS--GDGIFSPGGT 353
GLD I +AGE+LT+ ANTNMFTYEIAPVF LME++TL+K+R++IGWS+ GDGIFSPGG
Sbjct: 193 GLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIIGWSNKDGDGIFSPGGA 252
Query: 354 IANLYAVLAARYAYFPDVKTRGLFDAPRLIIFTSEQAHYSIKRAAIISGFGLNQVKLVKC 533
I+N+Y+++AARY YFP+VKT+G+ P+L++FTSE +HYSIK+A GFG + V L+KC
Sbjct: 253 ISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKC 312
Query: 534 NERGKMDTXXXXXXXXXXXXXXXXPCMVCSTGGTTVLGAFDPIDEISKICKQFGLWLHVD 713
NERGK+ P V +T GTTV GAFDPI EI+ IC+++ LWLHVD
Sbjct: 313 NERGKIIPADLEAKILDAKQKGFVPLYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 372
Query: 714 CAWGSGALLSKSHRYLLKGIENADSVTWNPHKAMAVTLQCSVILFKKESILENCNGLCAD 893
AWG G L+S+ HR+ L GIE A+SVTWNPHK M V LQCS IL K++ IL+ CN +CA
Sbjct: 373 AAWGGGLLMSRKHRHKLSGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAG 432
Query: 894 YLFQKDK 914
YLFQ DK
Sbjct: 433 YLFQPDK 439
>sp|P48318|DCE1_MOUSE Glutamate decarboxylase 1 (Glutamate decarboxylase, 67 kDa isoform)
(GAD-67) (67 kDa glutamic acid decarboxylase)
Length = 593
Score = 381 bits (979), Expect = e-105
Identities = 178/307 (57%), Positives = 232/307 (75%), Gaps = 3/307 (0%)
Frame = +3
Query: 3 KTSKVLDFHHPHQLKQAM-AHCMEIPETPKDLEQLLSDCKETLKYCVKTGHSRYFNQISC 179
+++KVLDFHHPHQL + M +E+ + P+ LEQ+L DC++TLKY V+TGH R+FNQ+S
Sbjct: 133 RSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLST 192
Query: 180 GLDAIAVAGEFLTAMANTNMFTYEIAPVFTLMEEVTLQKLRDLIGWSS--GDGIFSPGGT 353
GLD I +AGE+LT+ ANTNMFTYEIAPVF LME++TL+K+R+++GWS+ GDGIFSPGG
Sbjct: 193 GLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSNKDGDGIFSPGGA 252
Query: 354 IANLYAVLAARYAYFPDVKTRGLFDAPRLIIFTSEQAHYSIKRAAIISGFGLNQVKLVKC 533
I+N+Y+++AARY YFP+VKT+G+ P+L++FTSE +HYSIK+A GFG + V L+KC
Sbjct: 253 ISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKC 312
Query: 534 NERGKMDTXXXXXXXXXXXXXXXXPCMVCSTGGTTVLGAFDPIDEISKICKQFGLWLHVD 713
NERGK+ P V +T GTTV GAFDPI EI+ IC+++ LWLHVD
Sbjct: 313 NERGKIIPADLEAKILDAKQKGYVPLYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 372
Query: 714 CAWGSGALLSKSHRYLLKGIENADSVTWNPHKAMAVTLQCSVILFKKESILENCNGLCAD 893
AWG G L+S+ HR+ L GIE A+SVTWNPHK M V LQCS IL K++ IL+ CN +CA
Sbjct: 373 AAWGGGLLMSRKHRHKLSGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAG 432
Query: 894 YLFQKDK 914
YLFQ DK
Sbjct: 433 YLFQPDK 439
>sp|P14748|DCE1_FELCA Glutamate decarboxylase 1 (Glutamate decarboxylase, 67 kDa isoform)
(GAD-67) (67 kDa glutamic acid decarboxylase)
Length = 594
Score = 381 bits (978), Expect = e-105
Identities = 178/307 (57%), Positives = 232/307 (75%), Gaps = 3/307 (0%)
Frame = +3
Query: 3 KTSKVLDFHHPHQLKQAM-AHCMEIPETPKDLEQLLSDCKETLKYCVKTGHSRYFNQISC 179
+++KVLDFHHPHQL + M +E+ + P+ LEQ+L DC++TLKY V+TGH R+FNQ+S
Sbjct: 134 RSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVRTGHPRFFNQLST 193
Query: 180 GLDAIAVAGEFLTAMANTNMFTYEIAPVFTLMEEVTLQKLRDLIGWSS--GDGIFSPGGT 353
GLD I +AGE+LT+ ANTNMFTYEIAPVF LME++TL+K+R+++GWSS GDGIFSPGG
Sbjct: 194 GLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGA 253
Query: 354 IANLYAVLAARYAYFPDVKTRGLFDAPRLIIFTSEQAHYSIKRAAIISGFGLNQVKLVKC 533
I+N+Y+++AARY +FP+VKT+G+ P+L++FTSE +HYSIK+A GFG + V L+KC
Sbjct: 254 ISNMYSIMAARYKFFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKC 313
Query: 534 NERGKMDTXXXXXXXXXXXXXXXXPCMVCSTGGTTVLGAFDPIDEISKICKQFGLWLHVD 713
NERGK+ P V +T GTTV GAFDPI EI+ IC+++ LWLHVD
Sbjct: 314 NERGKIIPADLEAKILEAKQKGYVPLYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVD 373
Query: 714 CAWGSGALLSKSHRYLLKGIENADSVTWNPHKAMAVTLQCSVILFKKESILENCNGLCAD 893
AWG G L+S+ HR+ L GIE A+SVTWNPHK M V LQCS IL K++ IL+ CN +CA
Sbjct: 374 AAWGGGLLMSRKHRHKLSGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAG 433
Query: 894 YLFQKDK 914
YLFQ DK
Sbjct: 434 YLFQPDK 440
>sp|P48320|DCE2_MOUSE Glutamate decarboxylase 2 (Glutamate decarboxylase, 65 kDa isoform)
(GAD-65) (65 kDa glutamic acid decarboxylase)
Length = 585
Score = 345 bits (885), Expect = 1e-94
Identities = 159/306 (51%), Positives = 224/306 (73%), Gaps = 2/306 (0%)
Frame = +3
Query: 3 KTSKVLDFHHPHQLKQAMAHCMEIPETPKDLEQLLSDCKETLKYCVKTGHSRYFNQISCG 182
+++KV+DFH+P++L Q + E+ + P++LE++L+ C+ TLKY +KTGH RYFNQ+S G
Sbjct: 128 RSTKVIDFHYPNELLQE--YNWELADQPQNLEEILTHCQTTLKYAIKTGHPRYFNQLSTG 185
Query: 183 LDAIAVAGEFLTAMANTNMFTYEIAPVFTLMEEVTLQKLRDLIGW--SSGDGIFSPGGTI 356
LD + +A ++LT+ ANTNMFTYEIAPVF L+E VTL+K+R++IGW SGDGIFSPGG I
Sbjct: 186 LDMVGLAADWLTSTANTNMFTYEIAPVFVLLEYVTLKKMREIIGWPGGSGDGIFSPGGAI 245
Query: 357 ANLYAVLAARYAYFPDVKTRGLFDAPRLIIFTSEQAHYSIKRAAIISGFGLNQVKLVKCN 536
+N+YA+L ARY FP+VK +G+ PRLI FTSE +H+S+K+ A G G + V L+KC+
Sbjct: 246 SNMYAMLIARYKMFPEVKEKGMAAVPRLIAFTSEHSHFSLKKGAAALGIGTDSVILIKCD 305
Query: 537 ERGKMDTXXXXXXXXXXXXXXXXPCMVCSTGGTTVLGAFDPIDEISKICKQFGLWLHVDC 716
ERGKM P +V +T GTTV GAFDP+ ++ ICK++ +W+HVD
Sbjct: 306 ERGKMIPSDLERRILEVKQKGFVPFLVSATAGTTVYGAFDPLLAVADICKKYKIWMHVDA 365
Query: 717 AWGSGALLSKSHRYLLKGIENADSVTWNPHKAMAVTLQCSVILFKKESILENCNGLCADY 896
AWG G L+S+ H++ L G+E A+SVTWNPHK M V LQCS +L ++E ++++CN + A Y
Sbjct: 366 AWGGGLLMSRKHKWKLSGVERANSVTWNPHKMMGVPLQCSALLVREEGLMQSCNQMHASY 425
Query: 897 LFQKDK 914
LFQ+DK
Sbjct: 426 LFQQDK 431
>sp|Q05683|DCE2_RAT Glutamate decarboxylase 2 (Glutamate decarboxylase, 65 kDa isoform)
(GAD-65) (65 kDa glutamic acid decarboxylase)
Length = 585
Score = 345 bits (885), Expect = 1e-94
Identities = 159/306 (51%), Positives = 224/306 (73%), Gaps = 2/306 (0%)
Frame = +3
Query: 3 KTSKVLDFHHPHQLKQAMAHCMEIPETPKDLEQLLSDCKETLKYCVKTGHSRYFNQISCG 182
+++KV+DFH+P++L Q + E+ + P++LE++L+ C+ TLKY +KTGH RYFNQ+S G
Sbjct: 128 RSTKVIDFHYPNELLQE--YNWELADQPQNLEEILTHCQTTLKYAIKTGHPRYFNQLSTG 185
Query: 183 LDAIAVAGEFLTAMANTNMFTYEIAPVFTLMEEVTLQKLRDLIGW--SSGDGIFSPGGTI 356
LD + +A ++LT+ ANTNMFTYEIAPVF L+E VTL+K+R++IGW SGDGIFSPGG I
Sbjct: 186 LDMVGLAADWLTSTANTNMFTYEIAPVFVLLEYVTLKKMREIIGWPGGSGDGIFSPGGAI 245
Query: 357 ANLYAVLAARYAYFPDVKTRGLFDAPRLIIFTSEQAHYSIKRAAIISGFGLNQVKLVKCN 536
+N+YA+L ARY FP+VK +G+ PRLI FTSE +H+S+K+ A G G + V L+KC+
Sbjct: 246 SNMYAMLIARYKMFPEVKEKGMAAVPRLIAFTSEHSHFSLKKGAAALGIGTDSVILIKCD 305
Query: 537 ERGKMDTXXXXXXXXXXXXXXXXPCMVCSTGGTTVLGAFDPIDEISKICKQFGLWLHVDC 716
ERGKM P +V +T GTTV GAFDP+ ++ ICK++ +W+HVD
Sbjct: 306 ERGKMIPSDLERRILEVKQKGFVPFLVSATAGTTVYGAFDPLLAVADICKKYKIWMHVDA 365
Query: 717 AWGSGALLSKSHRYLLKGIENADSVTWNPHKAMAVTLQCSVILFKKESILENCNGLCADY 896
AWG G L+S+ H++ L G+E A+SVTWNPHK M V LQCS +L ++E ++++CN + A Y
Sbjct: 366 AWGGGLLMSRKHKWKLNGVERANSVTWNPHKMMGVPLQCSALLVREEGLMQSCNQMHASY 425
Query: 897 LFQKDK 914
LFQ+DK
Sbjct: 426 LFQQDK 431
>sp|Q05329|DCE2_HUMAN Glutamate decarboxylase 2 (Glutamate decarboxylase, 65 kDa isoform)
(GAD-65) (65 kDa glutamic acid decarboxylase)
Length = 585
Score = 343 bits (881), Expect = 3e-94
Identities = 158/306 (51%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
Frame = +3
Query: 3 KTSKVLDFHHPHQLKQAMAHCMEIPETPKDLEQLLSDCKETLKYCVKTGHSRYFNQISCG 182
+++KV+DFH+P++L Q + E+ + P++LE++L C+ TLKY +KTGH RYFNQ+S G
Sbjct: 128 RSTKVIDFHYPNELLQE--YNWELADQPQNLEEILMHCQTTLKYAIKTGHPRYFNQLSTG 185
Query: 183 LDAIAVAGEFLTAMANTNMFTYEIAPVFTLMEEVTLQKLRDLIGW--SSGDGIFSPGGTI 356
LD + +A ++LT+ ANTNMFTYEIAPVF L+E VTL+K+R++IGW SGDGIFSPGG I
Sbjct: 186 LDMVGLAADWLTSTANTNMFTYEIAPVFVLLEYVTLKKMREIIGWPGGSGDGIFSPGGAI 245
Query: 357 ANLYAVLAARYAYFPDVKTRGLFDAPRLIIFTSEQAHYSIKRAAIISGFGLNQVKLVKCN 536
+N+YA++ AR+ FP+VK +G+ PRLI FTSE +H+S+K+ A G G + V L+KC+
Sbjct: 246 SNMYAMMIARFKMFPEVKEKGMAALPRLIAFTSEHSHFSLKKGAAALGIGTDSVILIKCD 305
Query: 537 ERGKMDTXXXXXXXXXXXXXXXXPCMVCSTGGTTVLGAFDPIDEISKICKQFGLWLHVDC 716
ERGKM P +V +T GTTV GAFDP+ ++ ICK++ +W+HVD
Sbjct: 306 ERGKMIPSDLERRILEAKQKGFVPFLVSATAGTTVYGAFDPLLAVADICKKYKIWMHVDA 365
Query: 717 AWGSGALLSKSHRYLLKGIENADSVTWNPHKAMAVTLQCSVILFKKESILENCNGLCADY 896
AWG G L+S+ H++ L G+E A+SVTWNPHK M V LQCS +L ++E +++NCN + A Y
Sbjct: 366 AWGGGLLMSRKHKWKLSGVERANSVTWNPHKMMGVPLQCSALLVREEGLMQNCNQMHASY 425
Query: 897 LFQKDK 914
LFQ+DK
Sbjct: 426 LFQQDK 431
>sp|P48321|DCE2_PIG Glutamate decarboxylase 2 (Glutamate decarboxylase, 65 kDa isoform)
(GAD-65) (65 kDa glutamic acid decarboxylase)
Length = 585
Score = 343 bits (879), Expect = 5e-94
Identities = 158/306 (51%), Positives = 223/306 (72%), Gaps = 2/306 (0%)
Frame = +3
Query: 3 KTSKVLDFHHPHQLKQAMAHCMEIPETPKDLEQLLSDCKETLKYCVKTGHSRYFNQISCG 182
+++KV+DFH+P++L Q + E+ + P++LE++L C+ TLKY +KTGH RYFNQ+S G
Sbjct: 128 RSTKVIDFHYPNELLQE--YNWELADQPQNLEEILMHCQTTLKYAIKTGHPRYFNQLSTG 185
Query: 183 LDAIAVAGEFLTAMANTNMFTYEIAPVFTLMEEVTLQKLRDLIGW--SSGDGIFSPGGTI 356
LD + +A ++LT+ ANTNMFTYEIAPVF L+E VTL+K+R++IGW SGDGIFSPGG I
Sbjct: 186 LDMVGLAADWLTSTANTNMFTYEIAPVFVLLEYVTLKKMREIIGWPGGSGDGIFSPGGAI 245
Query: 357 ANLYAVLAARYAYFPDVKTRGLFDAPRLIIFTSEQAHYSIKRAAIISGFGLNQVKLVKCN 536
+N+YA+L AR+ FP+VK +G+ PRLI FTSE +H+S+K+ A G G + V L+KC+
Sbjct: 246 SNMYAMLIARFKMFPEVKEKGMAAVPRLIAFTSEHSHFSLKKGAAALGIGTDSVILIKCD 305
Query: 537 ERGKMDTXXXXXXXXXXXXXXXXPCMVCSTGGTTVLGAFDPIDEISKICKQFGLWLHVDC 716
ERGKM P +V +T GTTV GAFDP+ ++ ICK++ +W+HVD
Sbjct: 306 ERGKMIPSDLERRILEAKQKGFVPFLVSATAGTTVYGAFDPLLAVADICKKYKIWMHVDA 365
Query: 717 AWGSGALLSKSHRYLLKGIENADSVTWNPHKAMAVTLQCSVILFKKESILENCNGLCADY 896
AWG G L+S+ H++ L G+E A+SVTWNPHK M V LQCS +L ++E ++++CN + A Y
Sbjct: 366 AWGGGLLMSRKHKWKLSGVERANSVTWNPHKMMGVPLQCSALLVREEGLMQSCNQMHASY 425
Query: 897 LFQKDK 914
LFQ+DK
Sbjct: 426 LFQQDK 431
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,986,841
Number of Sequences: 369166
Number of extensions: 1759334
Number of successful extensions: 4692
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4614
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9702894260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)