Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_F03
(932 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P12107|CA1B_HUMAN Collagen alpha 1(XI) chain precursor 99 2e-20
sp|Q61245|COBA1_MOUSE Collagen alpha 1(XI) chain precursor 98 4e-20
sp|P35247|SFTPD_HUMAN Pulmonary surfactant-associated prote... 96 2e-19
sp|Q07092|COGA1_HUMAN Collagen alpha 1(XVI) chain precursor 93 1e-18
sp|P35248|SFTPD_RAT Pulmonary surfactant-associated protein... 92 2e-18
sp|Q8MHZ9|CL46_BOVIN Collectin-46 precursor (CL-46) (46 kDa... 92 2e-18
sp|P35246|SFTPD_BOVIN Pulmonary surfactant-associated prote... 92 2e-18
sp|P50404|PSPD_MOUSE Pulmonary surfactant-associated protei... 91 4e-18
sp|Q9XSJ7|CO1A1_CANFA Collagen alpha 1(I) chain precursor 91 6e-18
sp|P02452|CO1A1_HUMAN Collagen alpha 1(I) chain precursor 91 6e-18
>sp|P12107|CA1B_HUMAN Collagen alpha 1(XI) chain precursor
Length = 1806
Score = 98.6 bits (244), Expect = 2e-20
Identities = 69/232 (29%), Positives = 93/232 (40%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G+DGPPGP +G PG PG IG GE G+ G G G
Sbjct: 1422 PGAAGQDGPPGP---MGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGT 1478
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVAXXXXXXXXXXXXXXXXXXXX 595
G PG G G GP G GPPGP G GP+G +G KG
Sbjct: 1479 QGSPGAKGDGGIPGPAGPLGPPGPPGLPGPQGPKGNKGSTGPAGQKGDSGLPGPPGPPGP 1538
Query: 596 XXXXXXXXXXXXXXXXXXXXXXNTDFQNIFKRQRTTDEEEQFQRDEPQAEQKSSIDPNDE 775
I ++T E Q D + +D +D
Sbjct: 1539 PGEVIQPLP-------------------ILSSKKTRRHTEGMQAD----ADDNILDYSDG 1575
Query: 776 DEDIFEALLRLSTIVDNLFKPPGSKTYPARSCADIQRDYNNKSNGMYYIDPN 931
E+IF +L L ++++ P G++T PAR+C D+Q + + +G Y+IDPN
Sbjct: 1576 MEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPN 1627
Score = 87.4 bits (215), Expect = 5e-17
Identities = 45/102 (44%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLG---DPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAG 403
+PG G DGPPGP G +G +PG PG+ G+ G G PG+AG
Sbjct: 665 QPGMAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGPPGEKGPQGKPGLAG 724
Query: 404 NAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G GPPG G G G KG+ GPPGP G IG G RG KG
Sbjct: 725 LPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKG 766
Score = 81.6 bits (200), Expect = 3e-15
Identities = 44/100 (44%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGE---PGDPGVAGNA 409
G G++GPPGP G G G PG A GD G PG PG G
Sbjct: 1141 GGKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQ 1200
Query: 410 GLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GL GPPG+ G G+ GP G GPPGP G GP G GP+G
Sbjct: 1201 GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQG 1240
Score = 80.1 bits (196), Expect = 8e-15
Identities = 43/103 (41%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLG------DPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVA 400
G G DGP GP G +G + G PG A G+ GE G PG A
Sbjct: 1231 GPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAA 1290
Query: 401 GNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G GPPGD G GN GP G G PGP G +GP G+ G G
Sbjct: 1291 GPPGAKGPPGDDGPKGNPGPVGFPGDPGPPGELGPAGQDGVGG 1333
Score = 78.2 bits (191), Expect = 3e-14
Identities = 43/103 (41%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
E G G+ GPPGPSG+ G PG PG+ + G+AG G PG G G
Sbjct: 1337 EDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVG 1396
Query: 413 LIGP---PGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
GP PG G G GP G QG PG G GP G GP G+
Sbjct: 1397 PQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPMGPPGL 1439
Score = 77.4 bits (189), Expect = 5e-14
Identities = 46/110 (41%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPG------- 394
PG G +GP GP G +G PG G A G AGE G PG
Sbjct: 1041 PGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLRGRPGPQGPPGPAGEKGAPGEKGPQGP 1100
Query: 395 -----VAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
V G GL GP G AGS G DG KG G PG G+ G KGE GP G
Sbjct: 1101 AGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGGKGENGPPG 1150
Score = 77.0 bits (188), Expect = 7e-14
Identities = 41/99 (41%), Positives = 48/99 (48%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
+ G G+ GP GP G GD G G G+ G G PG AG G
Sbjct: 611 DKGHRGERGPQGPPGPPGDDGMRGED------------------GEIGPRGLPGEAGPRG 652
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
L+GP G G+ G G G GPPGP GN+GP+GE GP G
Sbjct: 653 LLGPRGTPGAPGQPGMAGVDGPPGPKGNMGPQGEPGPPG 691
Score = 77.0 bits (188), Expect = 7e-14
Identities = 42/98 (42%), Positives = 47/98 (47%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G DG G G++G G PG A G AG G PG GN G
Sbjct: 624 PGPPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPRGTPGAPGQPGMAGVDGPPGPKGNMGP 683
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG G GN GP+G GP GP IGP GE+GP+G
Sbjct: 684 QGEPGPPGQQGNPGPQGLPGPQGP---IGPPGEKGPQG 718
Score = 75.5 bits (184), Expect = 2e-13
Identities = 44/100 (44%), Positives = 48/100 (48%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G G PGP G GDPG PG GD GE GDPG G
Sbjct: 1299 PGDDGPKGNPGPVGFPGDPGPPGELGPAGQDGVG---------GDKGEDGDPGQPG---- 1345
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
PPG +G AG GP G +GPPG G G +GE+G KG A
Sbjct: 1346 --PPGPSGEAGPPGPPGKRGPPGAAGAEGRQGEKGAKGEA 1383
Score = 74.7 bits (182), Expect = 3e-13
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G DGP G G +G PG PG GD G+PG PG +G AG
Sbjct: 1297 GPPGDDGPKGNPGPVGFPGDPGPPGELGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPP 1356
Query: 419 GPPGD------AGSAGNDGPKGS------QGPPGPTGNIGPKGERGPKG 529
GPPG AG+ G G KG+ +GPPG TG +GP+G G G
Sbjct: 1357 GPPGKRGPPGAAGAEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPG 1405
Score = 73.6 bits (179), Expect = 8e-13
Identities = 39/100 (39%), Positives = 44/100 (44%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG GK+G G G LG PG G G GE G+ G G G
Sbjct: 732 PGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGD 791
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
+G GD G G GP+G GP GP G GP G+ GP G A
Sbjct: 792 MGLKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQA 831
Score = 73.2 bits (178), Expect = 1e-12
Identities = 40/97 (41%), Positives = 48/97 (49%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G GPPGP+GK G G PG + G G PG+PG G+ G
Sbjct: 562 GPRGVQGPPGPTGKPGKRGRPG------------------ADGGRGMPGEPGAKGDRGFD 603
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG G G+ G +G QGPPGP G+ G +GE G G
Sbjct: 604 GLPGLPGDKGHRGERGPQGPPGPPGDDGMRGEDGEIG 640
Score = 72.8 bits (177), Expect = 1e-12
Identities = 43/106 (40%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGD---------PGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDP 391
GR G G PGPSG+ G+ PG+PGR S G G PG
Sbjct: 817 GRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKG------------STGFPGFPGAN 864
Query: 392 GVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G G+ G PG G G GP+GS+G GPTG GPKG G G
Sbjct: 865 GEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDG 910
Score = 71.6 bits (174), Expect = 3e-12
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
+ G G GPPGP G +G PG G S G+ GE G PG G+ G
Sbjct: 740 QSGEKGALGPPGPQGPIGYPGPRG------VKGADGVRGLKGSKGEKGEDGFPGFKGDMG 793
Query: 413 LIGPPGDAGSAG---NDGPKGSQGPPGPTGNIGPKGERGPKG 529
L G G+ G G DGP+G +G GPTG+ GP G+ G KG
Sbjct: 794 LKGDRGEVGQIGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKG 835
Score = 71.2 bits (173), Expect = 4e-12
Identities = 47/125 (37%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDA------GEPGDPG 394
E G +G+ G PGP G G+ G PG A G A GE G PG
Sbjct: 977 ETGPIGERGYPGPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPG 1036
Query: 395 VAGNAGL------------IGPPGDAGSAGNDGP------KGSQGPPGPTGNIGPKGERG 520
G GL +G PG+ GSAG GP G QGPPGP G G GE+G
Sbjct: 1037 AQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLRGRPGPQGPPGPAGEKGAPGEKG 1096
Query: 521 PKGVA 535
P+G A
Sbjct: 1097 PQGPA 1101
Score = 71.2 bits (173), Expect = 4e-12
Identities = 40/98 (40%), Positives = 48/98 (48%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG+ G GP GP+GK G G G +G+ G PG G G G
Sbjct: 1389 PGKTGPVGPQGPAGKPGPEGLRG---------------IPGPVGEQGLPGAAGQDGPPGP 1433
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
+GPPG G G+ G KG +G PG G IGP GE+G KG
Sbjct: 1434 MGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKG 1471
Score = 70.1 bits (170), Expect = 8e-12
Identities = 41/107 (38%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGE------PGDPG 394
+ G G GPPGP G G PG PG G G G PG
Sbjct: 1184 DEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPG 1243
Query: 395 VAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G+ G +G G+ G AGN GP G G GP G G KGE GP G A
Sbjct: 1244 SVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAA 1290
Score = 70.1 bits (170), Expect = 8e-12
Identities = 44/118 (37%), Positives = 49/118 (41%), Gaps = 18/118 (15%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G GP G G+ G+ G PG A G G PGD G GN G
Sbjct: 1266 PGEAGVGGPKGERGEKGEAGPPGAAGPP---------------GAKGPPGDDGPKGNPGP 1310
Query: 416 IGPPGD---------------AGSAGNDGPKGSQGPPGPTGNI---GPKGERGPKGVA 535
+G PGD G G DG G GPPGP+G GP G+RGP G A
Sbjct: 1311 VGFPGDPGPPGELGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAA 1368
Score = 69.7 bits (169), Expect = 1e-11
Identities = 40/101 (39%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXS---IGDAGEPGDPGVAGN 406
PG GKDG PG G+ G+ GF G+ IG+ G PG PG G
Sbjct: 936 PGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGYPGPPGPPGE 995
Query: 407 AGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GL G G G+ G+ GP+G G GP G G GERG G
Sbjct: 996 QGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPG 1036
Score = 69.7 bits (169), Expect = 1e-11
Identities = 44/122 (36%), Positives = 48/122 (39%), Gaps = 21/122 (17%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
E G GK GPPGP G +G G G G GE G PG AG G
Sbjct: 953 ETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGYPGPP------GPPGEQGLPGAAGKEG 1006
Query: 413 LIGPPGDAGSAGNDGP---------------------KGSQGPPGPTGNIGPKGERGPKG 529
G PG G +G DGP KG +GP GP G +G GERG G
Sbjct: 1007 AKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAG 1066
Query: 530 VA 535
A
Sbjct: 1067 TA 1068
Score = 69.3 bits (168), Expect = 1e-11
Identities = 40/103 (38%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G GPPGP GK G PG PG+ +G G G+ G G G
Sbjct: 928 GFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGYP 987
Query: 419 GPPGD------AGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G+AG +G KG GP G +G GP G RG G
Sbjct: 988 GPPGPPGEQGLPGAAGKEGAKGDPGPQGISGKDGPAGLRGFPG 1030
Score = 69.3 bits (168), Expect = 1e-11
Identities = 43/105 (40%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G GKDGP G G G+ G PG +G GE G G AG GL
Sbjct: 1015 GISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLR 1074
Query: 419 G------PPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G PPG AG G G KG QGP G G GP G GP G A
Sbjct: 1075 GRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPA 1119
Score = 68.9 bits (167), Expect = 2e-11
Identities = 41/103 (39%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
GR G GPPGP+G+ G PG G G AG G PG G+ G I
Sbjct: 1075 GRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLP---GPAGPAGSPGEDGDKGEI 1131
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGP------KGERGPKG 529
G PG GS G G G GPPG G +G GE GP+G
Sbjct: 1132 GEPGQKGSKGGKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRG 1174
Score = 67.8 bits (164), Expect = 4e-11
Identities = 38/102 (37%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G+DGP GP G+ G G PG + G G G G G G
Sbjct: 805 GPRGEDGPEGPKGRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGAN 864
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIG---PKGERGPKGVA 535
G G G AG GP+G +GP GP G+ G P G+ GPKG +
Sbjct: 865 GEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTS 906
Score = 67.0 bits (162), Expect = 7e-11
Identities = 38/97 (39%), Positives = 40/97 (41%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G G PGP G G G PG G G PG G+ G+ G
Sbjct: 892 GARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQR 951
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G G G GP G GP GPTG GP GERG G
Sbjct: 952 GETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGYPG 988
Score = 66.6 bits (161), Expect = 9e-11
Identities = 41/107 (38%), Positives = 44/107 (41%), Gaps = 9/107 (8%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGR---------AXXXXXXXXXXXXXXXXSIGDAGEPGD 388
PG G G GP G G PGFPG A S G G G
Sbjct: 840 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRGARGPTGK 899
Query: 389 PGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
PG G +G GPPG G G GP+G G PGP G GP G+ G G
Sbjct: 900 PGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPG 946
Score = 66.6 bits (161), Expect = 9e-11
Identities = 38/103 (36%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Frame = +2
Query: 236 PGRMGKDGPPGP---SGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGN 406
PG G GP GP G G PG PG+ G G G G G
Sbjct: 915 PGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGP 974
Query: 407 AGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G GP G+ G G GP G QG PG G G KG+ GP+G++
Sbjct: 975 TGETGPIGERGYPGPPGPPGEQGLPGAAGKEGAKGDPGPQGIS 1017
Score = 63.5 bits (153), Expect = 8e-10
Identities = 38/100 (38%), Positives = 44/100 (44%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
+ R+ GPPGP G G PG G S G GE GDPG G G
Sbjct: 521 QQARIALRGPPGPMGLTGRPGPVG---------------GPGSSGAKGESGDPGPQGPRG 565
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
+ GPPG G G G G+ G G G G KG+RG G+
Sbjct: 566 VQGPPGPTGKPGKRGRPGADGGRGMPGEPGAKGDRGFDGL 605
Score = 63.5 bits (153), Expect = 8e-10
Identities = 40/100 (40%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Frame = +2
Query: 239 GRMGKDGP---PGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNA 409
GR G GP PGP+G G PG G S G GE G PG G
Sbjct: 1102 GRDGVQGPVGLPGPAGPAGSPGEDG------DKGEIGEPGQKGSKGGKGENGPPGPPGLQ 1155
Query: 410 GLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G +G PG AG G GP+G QG G G+ G +G GP G
Sbjct: 1156 GPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGPPG 1195
Score = 62.4 bits (150), Expect = 2e-09
Identities = 37/105 (35%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGK------LGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPG 394
+PG G+ GP GP G G PG G + G G PG G
Sbjct: 875 KPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKG 934
Query: 395 VAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G G PG G G G +G GPPGP G +GP+G G G
Sbjct: 935 PPGPPGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG 979
Score = 61.6 bits (148), Expect = 3e-09
Identities = 35/99 (35%), Positives = 43/99 (43%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
E G G+ GP GP+G+ G G G IG+ G+ G G G G
Sbjct: 1088 EKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGGKGENG 1147
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G G G G G PGP G G G++G +G
Sbjct: 1148 PPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEG 1186
Score = 61.2 bits (147), Expect = 4e-09
Identities = 38/110 (34%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKL--------GD----PGFPGRAXXXXXXXXXXXXXXXXSIGDAGE 379
PG G DG PGP G + GD P + G G
Sbjct: 477 PGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGL 536
Query: 380 PGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG G G G G++G G GP+G QGPPGPTG G +G G G
Sbjct: 537 TGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADG 586
Score = 58.9 bits (141), Expect = 2e-08
Identities = 40/100 (40%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNA--- 409
G G+DG PG G +G G G G AG GDPG +G A
Sbjct: 778 GEKGEDGFPGFKGDMGLKGDRGEVGQIGPRGEDGPEGPK---GRAGPTGDPGPSGQAGEK 834
Query: 410 GLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G +G PG G G GPKGS G PG G G KG RG G
Sbjct: 835 GKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAG 874
Score = 58.5 bits (140), Expect = 3e-08
Identities = 37/97 (38%), Positives = 40/97 (41%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G G G G+ G+ GFPG IG GE G G G AG
Sbjct: 766 GADGVRGLKGSKGEKGEDGFPG---FKGDMGLKGDRGEVGQIGPRGEDGPEGPKGRAGPT 822
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG +G AG G G G PG G GPKG G G
Sbjct: 823 GDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPG 859
Score = 56.2 bits (134), Expect = 1e-07
Identities = 44/128 (34%), Positives = 50/128 (39%), Gaps = 29/128 (22%)
Frame = +2
Query: 233 EPGRM--GKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGN 406
EPG + G GP GP+G +G PG G GD G PG PG+ G
Sbjct: 435 EPGMLVEGPPGPAGPAGIMGPPGLQGPTGPPGDP------------GDRGPPGRPGLPGA 482
Query: 407 AGLIGPPGDA-------GSAGNDGPKGS-----------------QGPPGP---TGNIGP 505
GL GPPG G G+ GP S +GPPGP TG GP
Sbjct: 483 DGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGP 542
Query: 506 KGERGPKG 529
G G G
Sbjct: 543 VGGPGSSG 550
Score = 55.1 bits (131), Expect = 3e-07
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Frame = +2
Query: 251 KDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI-GPP 427
+D P P + PG P + G+ G+ G+P V L+ GPP
Sbjct: 390 EDKPTSPPNEEFGPGVPAETDITETSINGHG-----AYGEKGQKGEPAVVEPGMLVEGPP 444
Query: 428 GDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
G AG AG GP G QGP GP G+ G +G G G+
Sbjct: 445 GPAGPAGIMGPPGLQGPTGPPGDPGDRGPPGRPGL 479
>sp|Q61245|COBA1_MOUSE Collagen alpha 1(XI) chain precursor
Length = 1804
Score = 97.8 bits (242), Expect = 4e-20
Identities = 70/232 (30%), Positives = 93/232 (40%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G+DGPPGP LG PG PG IG GE G+ G G G
Sbjct: 1420 PGAAGQDGPPGP---LGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGS 1476
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVAXXXXXXXXXXXXXXXXXXXX 595
G PG G G GP G GPPGP G GP G +G KG +
Sbjct: 1477 QGSPGAKGDGGIPGPAGPIGPPGPPGLPGPAGPKGNKGSSGPTGQKGDSGMPGPPGPPGP 1536
Query: 596 XXXXXXXXXXXXXXXXXXXXXXNTDFQNIFKRQRTTDEEEQFQRDEPQAEQKSSIDPNDE 775
I ++T E Q D + +D +D
Sbjct: 1537 PGEVIQPLP-------------------ILSPKKTRRHTESIQGDAGD----NILDYSDG 1573
Query: 776 DEDIFEALLRLSTIVDNLFKPPGSKTYPARSCADIQRDYNNKSNGMYYIDPN 931
E+IF +L L ++++ P G++T PAR+C D+Q + + +G Y+IDPN
Sbjct: 1574 MEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPN 1625
Score = 83.2 bits (204), Expect = 1e-15
Identities = 45/103 (43%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLG------DPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVA 400
G G DGP GP G +G D G PG A G+ GE G PG A
Sbjct: 1229 GPNGADGPQGPPGSIGSVGVVGDKGEPGEAGNPGPPGEAGSGGLKGERGEKGEAGPPGAA 1288
Query: 401 GNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G AG+ GPPGD G GN GP G G PGP G GP G+ G G
Sbjct: 1289 GPAGIKGPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGG 1331
Score = 82.4 bits (202), Expect = 2e-15
Identities = 44/102 (43%), Positives = 51/102 (50%), Gaps = 3/102 (2%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLG---DPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAG 403
+PG G DGP GP G +G +PG PG+ G+ G G PG+AG
Sbjct: 663 QPGIGGIDGPQGPKGNMGPQGEPGPPGQQGNPGSQGLPGPQGPIGPPGEKGPQGKPGLAG 722
Query: 404 NAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G GPPG G G G KG+ GPPGP G IG G RG KG
Sbjct: 723 LPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKG 764
Score = 80.5 bits (197), Expect = 6e-15
Identities = 44/100 (44%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGE---PGDPGVAGNA 409
G G++GPPGP G G G PG A GD G PG PG G
Sbjct: 1139 GDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGFPGLPGPIGLQ 1198
Query: 410 GLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GL GPPG+ G G+ GP G GPPGP G GP G GP+G
Sbjct: 1199 GLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQG 1238
Score = 78.2 bits (191), Expect = 3e-14
Identities = 46/110 (41%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPG------- 394
PG G +GP GP G +G PG G A G AGE G PG
Sbjct: 1039 PGLKGGEGPQGPQGPVGSPGERGSAGAAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGP 1098
Query: 395 -----VAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
V G GL GP G AGS G DG KG G PG G+ G KGE GP G
Sbjct: 1099 AGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPG 1148
Score = 77.8 bits (190), Expect = 4e-14
Identities = 43/103 (41%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
E G G+ GPPGPSG+ G PG PG+ + G+AG G PG G G
Sbjct: 1335 EDGDPGQPGPPGPSGEAGPPGPPGKRGPPGASGSEGRQGEKGAKGEAGAEGPPGKTGPVG 1394
Query: 413 LIGP---PGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
GP PG G G GP G QG PG G GP G GP G+
Sbjct: 1395 PQGPSGKPGPEGLRGIPGPVGEQGLPGAAGQDGPPGPLGPPGL 1437
Score = 77.0 bits (188), Expect = 7e-14
Identities = 44/100 (44%), Positives = 50/100 (50%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G G PGP G GDPG PG GD GE GDPG G
Sbjct: 1297 PGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVG---------GDKGEDGDPGQPG---- 1343
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
PPG +G AG GP G +GPPG +G+ G +GE+G KG A
Sbjct: 1344 --PPGPSGEAGPPGPPGKRGPPGASGSEGRQGEKGAKGEA 1381
Score = 75.5 bits (184), Expect = 2e-13
Identities = 43/104 (41%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G DG G G++G G PG A G G PG PG+ G G
Sbjct: 622 PGLPGDDGMRGEDGEIGPRGLPGEAGPRGLLGPR---------GTPGPPGQPGIGGIDGP 672
Query: 416 IGPPGDAGSAGNDGPKG------SQGPPGPTGNIGPKGERGPKG 529
GP G+ G G GP G SQG PGP G IGP GE+GP+G
Sbjct: 673 QGPKGNMGPQGEPGPPGQQGNPGSQGLPGPQGPIGPPGEKGPQG 716
Score = 74.7 bits (182), Expect = 3e-13
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G DGP G G +G PG PG GD G+PG PG +G AG
Sbjct: 1295 GPPGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPP 1354
Query: 419 GPPGD------AGSAGNDGPKGS------QGPPGPTGNIGPKGERGPKG 529
GPPG +GS G G KG+ +GPPG TG +GP+G G G
Sbjct: 1355 GPPGKRGPPGASGSEGRQGEKGAKGEAGAEGPPGKTGPVGPQGPSGKPG 1403
Score = 73.6 bits (179), Expect = 8e-13
Identities = 39/100 (39%), Positives = 44/100 (44%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG GK+G G G LG PG G G GE G+ G G G
Sbjct: 730 PGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDGFPGFKGD 789
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
+G GD G G GP+G GP GP G GP G+ GP G A
Sbjct: 790 MGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQA 829
Score = 73.6 bits (179), Expect = 8e-13
Identities = 42/101 (41%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPG---DPGVAGN 406
PGR G GPPGP+G+ G PG G G AG PG D G G
Sbjct: 1072 PGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGEIGE 1131
Query: 407 AGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G GD G G GP G QGP G G G GE GP+G
Sbjct: 1132 PGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRG 1172
Score = 73.2 bits (178), Expect = 1e-12
Identities = 43/106 (40%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGD---------PGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDP 391
GR G G PGPSG+ G+ PG+PGR S G G PG
Sbjct: 815 GRAGPTGDPGPSGQAGEKGKLGVPGLPGYPGRQGPKG------------STGFPGFPGAN 862
Query: 392 GVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G G+ G PG G G GP+GS+G GPTG GPKG G G
Sbjct: 863 GEKGARGIAGKPGPRGQRGPTGPRGSRGARGPTGKPGPKGTSGGDG 908
Score = 72.8 bits (177), Expect = 1e-12
Identities = 46/113 (40%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G G PG SG GD GF G G G PGD G+ G G
Sbjct: 580 PGADGGRGMPGESGSKGDRGFDGLPGLPGDKGHRGERGPQ---GPPGLPGDDGMRGEDGE 636
Query: 416 IGP---PGDAGSAGNDGPKGSQGPPG------------PTGNIGPKGERGPKG 529
IGP PG+AG G GP+G+ GPPG P GN+GP+GE GP G
Sbjct: 637 IGPRGLPGEAGPRGLLGPRGTPGPPGQPGIGGIDGPQGPKGNMGPQGEPGPPG 689
Score = 72.8 bits (177), Expect = 1e-12
Identities = 41/98 (41%), Positives = 48/98 (48%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG+ G GP GPSGK G G G +G+ G PG G G G
Sbjct: 1387 PGKTGPVGPQGPSGKPGPEGLRG---------------IPGPVGEQGLPGAAGQDGPPGP 1431
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
+GPPG G G+ G KG +G PG G IGP GE+G KG
Sbjct: 1432 LGPPGLPGLKGDPGSKGEKGHPGLIGLIGPPGEQGEKG 1469
Score = 72.0 bits (175), Expect = 2e-12
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
+ G G GPPGP G +G PG G S G+ GE G PG G+ G
Sbjct: 738 QSGEKGALGPPGPQGPIGYPGPRG------VKGADGVRGLKGSKGEKGEDGFPGFKGDMG 791
Query: 413 LIGPPGDAGSAG---NDGPKGSQGPPGPTGNIGPKGERGPKG 529
L G G+ G G DGP+G +G GPTG+ GP G+ G KG
Sbjct: 792 LKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQAGEKG 833
Score = 70.9 bits (172), Expect = 5e-12
Identities = 40/101 (39%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXS---IGDAGEPGDPGVAGN 406
PG GKDG PG G+ G+ GF G+ IG+ G PG PG G
Sbjct: 934 PGPAGKDGLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGE 993
Query: 407 AGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GL G G G+ G+ GP+G G GP G G GERG G
Sbjct: 994 QGLPGAAGKEGAKGDPGPQGISGKDGPAGIRGFPGERGLPG 1034
Score = 70.5 bits (171), Expect = 6e-12
Identities = 38/100 (38%), Positives = 42/100 (42%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G G GP G G PGFPG G G G G G G
Sbjct: 838 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAGKPGPRGQRGPTGPRGSRGARGPTGK 897
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
GP G +G G GP G +GP GP G +G G +GP G A
Sbjct: 898 PGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPA 937
Score = 70.5 bits (171), Expect = 6e-12
Identities = 41/102 (40%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGN---A 409
G G GPPGP+GK G PG PG+ G G PG GV G
Sbjct: 926 GFPGPKGPPGPAGKDGLPGHPGQRGETGFQ------------GKTGPPGPGGVVGPQGPT 973
Query: 410 GLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G GP G+ G G GP G QG PG G G KG+ GP+G++
Sbjct: 974 GETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGDPGPQGIS 1015
Score = 69.7 bits (169), Expect = 1e-11
Identities = 44/122 (36%), Positives = 48/122 (39%), Gaps = 21/122 (17%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
E G GK GPPGP G +G G G G GE G PG AG G
Sbjct: 951 ETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPP------GPPGEQGLPGAAGKEG 1004
Query: 413 LIGPPGDAGSAGNDGP---------------------KGSQGPPGPTGNIGPKGERGPKG 529
G PG G +G DGP KG +GP GP G +G GERG G
Sbjct: 1005 AKGDPGPQGISGKDGPAGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGPVGSPGERGSAG 1064
Query: 530 VA 535
A
Sbjct: 1065 AA 1066
Score = 69.3 bits (168), Expect = 1e-11
Identities = 43/105 (40%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G GKDGP G G G+ G PG +G GE G G AG GL
Sbjct: 1013 GISGKDGPAGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGPVGSPGERGSAGAAGPIGLP 1072
Query: 419 G------PPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G PPG AG G G KG QGP G G GP G GP G A
Sbjct: 1073 GRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPA 1117
Score = 68.2 bits (165), Expect = 3e-11
Identities = 45/117 (38%), Positives = 50/117 (42%), Gaps = 18/117 (15%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSG---------KLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPG 385
EPG G GPPG +G + G+ G PG A G G PG
Sbjct: 1254 EPGEAGNPGPPGEAGSGGLKGERGEKGEAGPPGAAGPA---------------GIKGPPG 1298
Query: 386 DPGVAGNAGLI------GPPGDAGSAGND---GPKGSQGPPGPTGNIGPKGERGPKG 529
D G GN G + GPPG+ G AG D G KG G PG G GP GE GP G
Sbjct: 1299 DDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPG 1355
Score = 67.4 bits (163), Expect = 5e-11
Identities = 42/103 (40%), Positives = 44/103 (42%), Gaps = 6/103 (5%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G DGPPGP G+ G G G +G G G PG AG GL
Sbjct: 902 GTSGGDGPPGPPGERGPQGPQG------------------PVGFPGPKGPPGPAGKDGLP 943
Query: 419 GPPGDAGSAGNDG------PKGSQGPPGPTGNIGPKGERGPKG 529
G PG G G G P G GP GPTG GP GERG G
Sbjct: 944 GHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPG 986
Score = 67.0 bits (162), Expect = 7e-11
Identities = 37/98 (37%), Positives = 43/98 (43%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G GPPG G G PG G + G G PG G +G G
Sbjct: 700 PGPQGPIGPPGEKGPQGKPGLAG---------------LPGADGPPGHPGKEGQSGEKGA 744
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
+GPPG G G GP+G +G G G G KGE+G G
Sbjct: 745 LGPPGPQGPIGYPGPRGVKGADGVRGLKGSKGEKGEDG 782
Score = 66.6 bits (161), Expect = 9e-11
Identities = 38/100 (38%), Positives = 45/100 (45%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG +G G PGP G+ G+ G G G G G PG G+ G+
Sbjct: 1192 PGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPN---GADGPQGPPGSIGSVGV 1248
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
+G G+ G AGN GP G G G G G KGE GP G A
Sbjct: 1249 VGDKGEPGEAGNPGPPGEAGSGGLKGERGEKGEAGPPGAA 1288
Score = 65.9 bits (159), Expect = 2e-10
Identities = 40/98 (40%), Positives = 44/98 (44%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G GPPGP+GK G G PG G GE G G G GL
Sbjct: 560 GPRGVQGPPGPTGKPGKRGRPGADGGR---------------GMPGESGSKGDRGFDGLP 604
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
G PGD G G GP+G G PG G G GE GP+G+
Sbjct: 605 GLPGDKGHRGERGPQGPPGLPGDDGMRGEDGEIGPRGL 642
Score = 65.9 bits (159), Expect = 2e-10
Identities = 39/97 (40%), Positives = 42/97 (43%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G GK GP G SG G PG PG G G PG G G AG
Sbjct: 893 GPTGKPGPKGTSGGDGPPGPPGERGPQGPQ------------GPVGFPGPKGPPGPAGKD 940
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG G G G +G GPPGP G +GP+G G G
Sbjct: 941 GLPGHPGQRGETGFQGKTGPPGPGGVVGPQGPTGETG 977
Score = 65.9 bits (159), Expect = 2e-10
Identities = 38/99 (38%), Positives = 44/99 (44%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G+ G G G +G PG PG SIG G GD G G AG
Sbjct: 1201 PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGVVGDKGEPGEAGN 1260
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
GPPG+AGS G G +G +G GP G GP G+
Sbjct: 1261 PGPPGEAGSGGLKGERGEKG------EAGPPGAAGPAGI 1293
Score = 64.3 bits (155), Expect = 5e-10
Identities = 38/100 (38%), Positives = 44/100 (44%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
+ R+ GPPGP G G PG G S G GE GDPG G G
Sbjct: 519 QQARIALRGPPGPMGLTGRPGPVG---------------GPGSTGAKGESGDPGPQGPRG 563
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
+ GPPG G G G G+ G G G G KG+RG G+
Sbjct: 564 VQGPPGPTGKPGKRGRPGADGGRGMPGESGSKGDRGFDGL 603
Score = 61.6 bits (148), Expect = 3e-09
Identities = 38/110 (34%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKL--------GD----PGFPGRAXXXXXXXXXXXXXXXXSIGDAGE 379
PG G DG PGP G + GD P + G G
Sbjct: 475 PGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGL 534
Query: 380 PGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG G G G G++G G GP+G QGPPGPTG G +G G G
Sbjct: 535 TGRPGPVGGPGSTGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADG 584
Score = 60.5 bits (145), Expect = 7e-09
Identities = 38/99 (38%), Positives = 42/99 (42%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
E G G G PGP G+ G G G S G G G PG G +G
Sbjct: 864 EKGARGIAGKPGPRGQRGPTGPRG------------------SRGARGPTGKPGPKGTSG 905
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G G GP+G G PGP G GP G+ G G
Sbjct: 906 GDGPPGPPGERGPQGPQGPVGFPGPKGPPGPAGKDGLPG 944
Score = 58.5 bits (140), Expect = 3e-08
Identities = 40/100 (40%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNA--- 409
G G+DG PG G +G G G G AG GDPG +G A
Sbjct: 776 GEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPK---GRAGPTGDPGPSGQAGEK 832
Query: 410 GLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G +G PG G G GPKGS G PG G G KG RG G
Sbjct: 833 GKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIAG 872
Score = 58.2 bits (139), Expect = 3e-08
Identities = 36/97 (37%), Positives = 40/97 (41%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G G G G+ G+ GFPG +G GE G G G AG
Sbjct: 764 GADGVRGLKGSKGEKGEDGFPG---FKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPT 820
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG +G AG G G G PG G GPKG G G
Sbjct: 821 GDPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPG 857
Score = 56.6 bits (135), Expect = 1e-07
Identities = 44/128 (34%), Positives = 51/128 (39%), Gaps = 29/128 (22%)
Frame = +2
Query: 233 EPGRM--GKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGN 406
EPG + G GP GP+G +G PG G + GD G PG PG+ G
Sbjct: 433 EPGMLVEGPPGPAGPAGLMGPPGLQGPSGLPGDP------------GDRGPPGRPGLPGA 480
Query: 407 AGLIGPPGDA-------GSAGNDGPKGS-----------------QGPPGP---TGNIGP 505
GL GPPG G G+ GP S +GPPGP TG GP
Sbjct: 481 DGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGPMGLTGRPGP 540
Query: 506 KGERGPKG 529
G G G
Sbjct: 541 VGGPGSTG 548
Score = 53.5 bits (127), Expect = 8e-07
Identities = 30/65 (46%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Frame = +2
Query: 365 GDAGEP----------GDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGE 514
G GEP G PG AG AGL+GPPG G +G G G +GPPG G G G
Sbjct: 424 GQKGEPAVVEPGMLVEGPPGPAGPAGLMGPPGLQGPSGLPGDPGDRGPPGRPGLPGADGL 483
Query: 515 RGPKG 529
GP G
Sbjct: 484 PGPPG 488
Score = 50.1 bits (118), Expect = 9e-06
Identities = 28/59 (47%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +2
Query: 365 GDAGEPGDPGVAGNAGLI-GPPGDAGSAGNDGPKGSQGP---PGPTGNIGPKGERGPKG 529
G+ G+ G+P V L+ GPPG AG AG GP G QGP PG G+ GP G G G
Sbjct: 421 GEKGQKGEPAVVEPGMLVEGPPGPAGPAGLMGPPGLQGPSGLPGDPGDRGPPGRPGLPG 479
>sp|P35247|SFTPD_HUMAN Pulmonary surfactant-associated protein D precursor (SP-D) (PSP-D)
Length = 375
Score = 95.5 bits (236), Expect = 2e-19
Identities = 48/98 (48%), Positives = 52/98 (53%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PGR G+DG GP G+ GDPG PG A G GEPG G G +G
Sbjct: 48 PGRDGRDGREGPRGEKGDPGLPGAAGQAGMPGQAGPVGPKGDNGSVGEPGPKGDTGPSGP 107
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G AG +GP G QG GP G GPKGE GPKG
Sbjct: 108 PGPPGVPGPAGREGPLGKQGNIGPQGKPGPKGEAGPKG 145
Score = 66.2 bits (160), Expect = 1e-10
Identities = 31/56 (55%), Positives = 33/56 (58%)
Frame = +2
Query: 365 GDAGEPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
G GE GDPG+ G AG G PG AG G G GS G PGP G+ GP G GP GV
Sbjct: 58 GPRGEKGDPGLPGAAGQAGMPGQAGPVGPKGDNGSVGEPGPKGDTGPSGPPGPPGV 113
Score = 66.2 bits (160), Expect = 1e-10
Identities = 41/101 (40%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGD---AGEPGDPGVAGN 406
PG G++GP G G +G G PG S G AG G+ GV G
Sbjct: 114 PGPAGREGPLGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGSAGARGLAGPKGERGVPGE 173
Query: 407 AGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G+ G G AGSAG GP+GS G GP G G KG G KG
Sbjct: 174 RGVPGNAGAAGSAGAMGPQGSPGARGPPGLKGDKGIPGDKG 214
Score = 64.7 bits (156), Expect = 4e-10
Identities = 42/102 (41%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
EPG G GP GP G G PG GR +IG G+PG G AG G
Sbjct: 95 EPGPKGDTGPSGPPGPPGVPGPAGREGPLGKQG---------NIGPQGKPGPKGEAGPKG 145
Query: 413 LIGPPGDAGSAGN---DGPKGSQGPPGPTGNIGPKGERGPKG 529
+G PG GSAG GPKG +G PG G G G G G
Sbjct: 146 EVGAPGMQGSAGARGLAGPKGERGVPGERGVPGNAGAAGSAG 187
Score = 64.7 bits (156), Expect = 4e-10
Identities = 38/99 (38%), Positives = 47/99 (47%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G GK GP G +G G+ G PG G+ G PG+ G AG+AG +
Sbjct: 130 GPQGKPGPKGEAGPKGEVGAPGMQGSAGARGLAGPKGERGVPGERGVPGNAGAAGSAGAM 189
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
GP G G+ G G KG +G P G+ G KGE G VA
Sbjct: 190 GPQGSPGARGPPGLKGDKGIP---GDKGAKGESGLPDVA 225
Score = 48.1 bits (113), Expect = 3e-05
Identities = 26/55 (47%), Positives = 28/55 (50%)
Frame = +2
Query: 365 GDAGEPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G G G G G G PG G+AG G G GP GP G+ G GE GPKG
Sbjct: 46 GLPGRDGRDGREGPRGEKGDPGLPGAAGQAGMPGQAGPVGPKGDNGSVGEPGPKG 100
Score = 47.4 bits (111), Expect = 6e-05
Identities = 23/51 (45%), Positives = 26/51 (50%)
Frame = +2
Query: 377 EPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
E G PG G G GP G+ G G G G G PG G +GPKG+ G G
Sbjct: 44 ESGLPGRDGRDGREGPRGEKGDPGLPGAAGQAGMPGQAGPVGPKGDNGSVG 94
>sp|Q07092|COGA1_HUMAN Collagen alpha 1(XVI) chain precursor
Length = 1603
Score = 92.8 bits (229), Expect = 1e-18
Identities = 49/116 (42%), Positives = 56/116 (48%), Gaps = 18/116 (15%)
Frame = +2
Query: 236 PGRMGKDGPPG------PSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGV 397
PG+ G++GPPG P G +G PGFPG GD GEPG PG
Sbjct: 1028 PGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDKGEPGPPGQ 1087
Query: 398 AGNAGLIGPPG------------DAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G GPPG AG G GP GS+G PGP G GP+GERGP+G
Sbjct: 1088 PGYPGATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQG 1143
Score = 79.0 bits (193), Expect = 2e-14
Identities = 44/104 (42%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXS--IGDAGEPGDPGVAGN 406
EPG MG G PGP G +G PG PG+ + G AG PG PG G+
Sbjct: 1276 EPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAGLPGQPGPPGH 1335
Query: 407 AGLIGPPGDAGSAGNDGPKGSQ---GPPGPTGNIGPKGERGPKG 529
G G PG G+AG +GP G Q GPPGP G+ G G++G G
Sbjct: 1336 PGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAG 1379
Score = 78.6 bits (192), Expect = 2e-14
Identities = 43/107 (40%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
+PG G GP GP G +G PGF G+ GD G+PG PG G G
Sbjct: 1222 KPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPK---------GDCGKPGPPGSTGRPG 1272
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGP--------KGERGPKG 529
G PG G G GP G GPPGP G GP KG+RG G
Sbjct: 1273 AEGEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATG 1319
Score = 72.4 bits (176), Expect = 2e-12
Identities = 42/110 (38%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGD---------PGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGD 388
PG++G GPPGP + G PG PG G G GD
Sbjct: 1169 PGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGD 1228
Query: 389 PGVAGNAGLIGPPGDAGSAGN---DGPKGSQGPPGPTGNIGPKGERGPKG 529
PG AG GL+GPPG G G+ GPKG G PGP G+ G G G G
Sbjct: 1229 PGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPG 1278
Score = 72.0 bits (175), Expect = 2e-12
Identities = 42/101 (41%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
+PG G GPPG G G+PG PGR G GEPG PG+ G G
Sbjct: 762 QPGLPGVQGPPGLKGVQGEPGPPGRGVQ----------------GPQGEPGAPGLPGIQG 805
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGE--RGPKG 529
L GP G G G G +GS G G TG +GP G GP G
Sbjct: 806 LPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPG 846
Score = 69.7 bits (169), Expect = 1e-11
Identities = 40/99 (40%), Positives = 46/99 (46%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
EPG G+ G PG +G G PG G G AGE G+PG G+ G
Sbjct: 1081 EPGPPGQPGYPGATGPPGLPGIKGERGYT---------------GSAGEKGEPGPPGSEG 1125
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
L GPPG AG G GP+G+ G G G G G GP G
Sbjct: 1126 LPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFTGPTG 1164
Score = 69.3 bits (168), Expect = 1e-11
Identities = 39/99 (39%), Positives = 44/99 (44%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
E G G G PG +G G PGFPG+ G +G PG PG G G
Sbjct: 1147 EKGDQGFQGQPGFTGPTGSPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPG 1206
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
+ GP G G G DG G +G PGP G G G G KG
Sbjct: 1207 IQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKG 1245
Score = 67.8 bits (164), Expect = 4e-11
Identities = 41/103 (39%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG GKDG PG G G PG PG+ + G+ G+ G G+AG GL
Sbjct: 1474 PGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIGI-GIAGENGL 1532
Query: 416 IGPPGDAG-----SAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G G GP G QG PG G GP G+ G G
Sbjct: 1533 PGPPGPQGPPGYGKMGATGPMGQQGIPGIPGPPGPMGQPGKAG 1575
Score = 66.6 bits (161), Expect = 9e-11
Identities = 44/106 (41%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Frame = +2
Query: 236 PGRMGKDGPP-----GPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVA 400
PG+ G+D P GP G+ GDPGF G G AGEPG PG+
Sbjct: 413 PGKPGRDAPGEICVIGPKGQKGDPGFVGPE------------------GLAGEPGPPGLP 454
Query: 401 G--NAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
G GL G PGD G G GPKG +G G G GP G+ G GV
Sbjct: 455 GPPGIGLPGTPGDPG--GPPGPKGDKGSSGIPGKEGPGGKPGKPGV 498
Score = 66.2 bits (160), Expect = 1e-10
Identities = 37/88 (42%), Positives = 41/88 (46%)
Frame = +2
Query: 266 GPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLIGPPGDAGSA 445
G G G PG PG + GD E GDPG G+ GL GPPG G
Sbjct: 973 GEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSE-GDPGCVGSPGLPGPPGLPGQR 1031
Query: 446 GNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G +GP G +G PGP G IGP G G G
Sbjct: 1032 GEEGPPGMRGSPGPPGPIGPPGFPGAVG 1059
Score = 66.2 bits (160), Expect = 1e-10
Identities = 38/104 (36%), Positives = 45/104 (43%), Gaps = 6/104 (5%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPG------DPGVA 400
G G+ G PGP G G PG PG A G G+PG PG
Sbjct: 1110 GSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFTGPTGSPGFP 1169
Query: 401 GNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
G G GPPG G++G +G G PG G GP G +GP G+
Sbjct: 1170 GKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGL 1213
Score = 66.2 bits (160), Expect = 1e-10
Identities = 38/97 (39%), Positives = 42/97 (43%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G+ GPPG G G+PG G A GD G G G AG G
Sbjct: 1325 GLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRA 1384
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG G +G+ GP G PPGP G G G GP G
Sbjct: 1385 GMPGGPGKSGSMGPVG---PPGPAGERGHPGAPGPSG 1418
Score = 66.2 bits (160), Expect = 1e-10
Identities = 38/92 (41%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG+ G GPPGP G G G G+A G AG PG PG +G+ G
Sbjct: 1354 PGKQGFYGPPGPKGDPGAAGQKGQAGEK---------------GRAGMPGGPGKSGSMGP 1398
Query: 416 IGPPGDAGSAGN---DGPKGSQGPPGPTGNIG 502
+GPPG AG G+ GP GS G PG G++G
Sbjct: 1399 VGPPGPAGERGHPGAPGPSGSPGLPGVPGSMG 1430
Score = 65.9 bits (159), Expect = 2e-10
Identities = 42/113 (37%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Frame = +2
Query: 233 EPGRMGKDGPPGP------SGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPG 394
E G G GPPGP G G+P P A G+ GEPG PG
Sbjct: 605 EAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPG 664
Query: 395 V--------AGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
AG GL G GDAG+ G+ G G+ G PG +G G +G GPKG
Sbjct: 665 FGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKG 717
Score = 64.3 bits (155), Expect = 5e-10
Identities = 37/99 (37%), Positives = 43/99 (43%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG+ G G PGP G+ G G G+ G AG+ G G G AG+
Sbjct: 1327 PGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGM 1386
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
G PG +GS G GP G G G G GP G G GV
Sbjct: 1387 PGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGV 1425
Score = 63.2 bits (152), Expect = 1e-09
Identities = 44/135 (32%), Positives = 52/135 (38%), Gaps = 11/135 (8%)
Frame = +2
Query: 149 GKPGIXXXXXXXXXXXXXXXXXXXXXXXEPGRMGKDGPPG-PSGKLGDPGFPGRAXXXXX 325
GKPG+ PG+ G G PG P GDPG G
Sbjct: 494 GKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVRARGDPGIQGIKGEKGE 553
Query: 326 XXXXXXXXXXX--------SIGDAGEPGD--PGVAGNAGLIGPPGDAGSAGNDGPKGSQG 475
+ GD G PG PG+ G AG+ G G+ G+ G GP GS G
Sbjct: 554 PCLSCSSVVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGSPG 613
Query: 476 PPGPTGNIGPKGERG 520
PPGP G G KG +G
Sbjct: 614 PPGPVGPAGIKGAKG 628
Score = 62.4 bits (150), Expect = 2e-09
Identities = 34/86 (39%), Positives = 41/86 (47%)
Frame = +2
Query: 263 PGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLIGPPGDAGS 442
PGPSG+ G+PG PG G G+ G+ G+ G G G PGD G+
Sbjct: 651 PGPSGEKGEPGPPGFGLP----------------GKQGKAGERGLKGQKGDAGNPGDPGT 694
Query: 443 AGNDGPKGSQGPPGPTGNIGPKGERG 520
G G G G PG G GPKGE+G
Sbjct: 695 PGTTGRPGLSGEPGVQGPAGPKGEKG 720
Score = 60.8 bits (146), Expect = 5e-09
Identities = 41/112 (36%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G+ G G +G+ G+PG PG G++GE GD G G G
Sbjct: 1100 PGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGF 1159
Query: 416 IGP------PGDAGSAGNDGP---KGSQGPPGPT---GNIGPKGERGPKGVA 535
GP PG GS G GP KGS+G GP+ G+ GP G G +G A
Sbjct: 1160 TGPTGSPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPA 1211
Score = 60.5 bits (145), Expect = 7e-09
Identities = 39/102 (38%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 233 EPGRMGKDGPPGPS--GKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGN 406
+PG G+ GP G GK G PG PG G GEPG PG
Sbjct: 742 QPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLK------------GVQGEPGPPG---- 785
Query: 407 AGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
G+ GP G+ G+ G G +G GP GP G G KG +G GV
Sbjct: 786 RGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGV 827
Score = 60.5 bits (145), Expect = 7e-09
Identities = 40/102 (39%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Frame = +2
Query: 248 GKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLIGPP 427
G+ GPPG G G PG PG IG G G PGV G G G
Sbjct: 1472 GRPGPPGKDGAPGRPGAPG------------SPGLPGQIGREGRQGLPGVRGLPGTKGEK 1519
Query: 428 GD-----AGSAGNDGPKGSQGPP--GPTGNIGPKGERGPKGV 532
GD AG G GP G QGPP G G GP G++G G+
Sbjct: 1520 GDIGIGIAGENGLPGPPGPQGPPGYGKMGATGPMGQQGIPGI 1561
Score = 59.7 bits (143), Expect = 1e-08
Identities = 39/99 (39%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G+ G G G G PG PGR IG G+ GDPG G GL
Sbjct: 396 GEKGQKGEKGDGGIKGVPGKPGRDAPGEICV----------IGPKGQKGDPGFVGPEGLA 445
Query: 419 GPPGDAGSAGNDGPKGSQGPPG-PTGNIGPKGERGPKGV 532
G PG G G G G G PG P G GPKG++G G+
Sbjct: 446 GEPGPPGLPGPPGI-GLPGTPGDPGGPPGPKGDKGSSGI 483
Score = 58.9 bits (141), Expect = 2e-08
Identities = 40/119 (33%), Positives = 45/119 (37%), Gaps = 22/119 (18%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGD-----PGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAG 403
G G GP GP G+ GD P G G PG PG G
Sbjct: 705 GEPGVQGPAGPKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPG 764
Query: 404 NAGLIGPPGDAGSAGNDGP--KGSQGP---------------PGPTGNIGPKGERGPKG 529
G+ GPPG G G GP +G QGP PGP G GP GE+G +G
Sbjct: 765 LPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQG 823
Score = 58.5 bits (140), Expect = 3e-08
Identities = 36/96 (37%), Positives = 42/96 (43%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
+ G G GP G +G+ G PG PG IG G PGDPG
Sbjct: 432 QKGDPGFVGPEGLAGEPGPPGLPG----------------PPGIGLPGTPGDPG------ 469
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERG 520
GPPG G G+ G G +GP G G G KGE+G
Sbjct: 470 --GPPGPKGDKGSSGIPGKEGPGGKPGKPGVKGEKG 503
Score = 53.9 bits (128), Expect = 6e-07
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 14/113 (12%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G+ G PGP G G+ G G + G GE G+ G G +GL
Sbjct: 337 GGKGERGLPGPPGSKGEKGARGN----DCVRISPDAPLQCAEGPKGEKGESGALGPSGLP 392
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGN--------IGPKGER------GPKGVA 535
G G+ G G G G +G PG G IGPKG++ GP+G+A
Sbjct: 393 GSTGEKGQKGEKGDGGIKGVPGKPGRDAPGEICVIGPKGQKGDPGFVGPEGLA 445
Score = 53.5 bits (127), Expect = 8e-07
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +2
Query: 362 IGDAGEPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
+G G PG PG+ G G GPPG GS G GP G G PG G+ G G +G +G+
Sbjct: 1016 VGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGL 1072
Score = 53.1 bits (126), Expect = 1e-06
Identities = 35/108 (32%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Frame = +2
Query: 245 MGKDGPPGPSGKLGDPGFPGR-----AXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNA 409
+ GP G G+ G PG PG A + G GE G+ G G +
Sbjct: 330 LAPSGPKGGKGERGLPGPPGSKGEKGARGNDCVRISPDAPLQCAEGPKGEKGESGALGPS 389
Query: 410 GLIGPPGDAGSAGNDGPKGSQGPPGPTGN--------IGPKGERGPKG 529
GL G G+ G G G G +G PG G IGPKG++G G
Sbjct: 390 GLPGSTGEKGQKGEKGDGGIKGVPGKPGRDAPGEICVIGPKGQKGDPG 437
Score = 50.1 bits (118), Expect = 9e-06
Identities = 39/137 (28%), Positives = 47/137 (34%), Gaps = 39/137 (28%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNA--- 409
G MG GPPGP+G+ G PG PG + G G PG PG G+
Sbjct: 1394 GSMGPVGPPGPAGERGHPGAPGPS------------------GSPGLPGVPGSMGDMVNY 1435
Query: 410 ------------------------------------GLIGPPGDAGSAGNDGPKGSQGPP 481
G GPPG G+ G G GS G P
Sbjct: 1436 DEIKRFIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSPGLP 1495
Query: 482 GPTGNIGPKGERGPKGV 532
G G G +G G +G+
Sbjct: 1496 GQIGREGRQGLPGVRGL 1512
Score = 49.3 bits (116), Expect = 2e-05
Identities = 37/114 (32%), Positives = 43/114 (37%), Gaps = 14/114 (12%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGF-----PGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGV 397
E G G G G +G +G PG PGR G+ GEPG+
Sbjct: 818 EKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGECSC 877
Query: 398 AGNAGLI--GPPGDAG-------SAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
LI G PG G G GP G GPPGP G G +G G G+
Sbjct: 878 PSQGDLIFSGMPGAPGLWMGSSWQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGL 931
Score = 47.0 bits (110), Expect = 8e-05
Identities = 28/73 (38%), Positives = 32/73 (43%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
E GR G G PG SG +G G PG A G+ G PG PG +G+ G
Sbjct: 1380 EKGRAGMPGGPGKSGSMGPVGPPGPA------------------GERGHPGAPGPSGSPG 1421
Query: 413 LIGPPGDAGSAGN 451
L G PG G N
Sbjct: 1422 LPGVPGSMGDMVN 1434
Score = 45.8 bits (107), Expect = 2e-04
Identities = 34/100 (34%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGD---AGEPGDPGV-A 400
+ G+ G G PG G G+ G PG S GD +G PG PG+
Sbjct: 850 QQGQTGLRGTPGEKGPRGEKGEPGECSCP-------------SQGDLIFSGMPGAPGLWM 896
Query: 401 GNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERG 520
G++ GP G G G GP G G G GN G G+ G
Sbjct: 897 GSSWQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGLPGQPG 936
Score = 45.8 bits (107), Expect = 2e-04
Identities = 28/90 (31%), Positives = 35/90 (38%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
+ G G G GP G+ G+PG +G + +PG G G G
Sbjct: 853 QTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSSWQPGPQGPPGIPG 912
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIG 502
GPPG G G G G G PG T +G
Sbjct: 913 PPGPPGVPGLQGVPGNNGLPGQPGLTAELG 942
Score = 42.4 bits (98), Expect = 0.002
Identities = 36/111 (32%), Positives = 39/111 (35%), Gaps = 16/111 (14%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G GPPGP G G G PG+ G G PG G G
Sbjct: 465 PGDPG--GPPGPKGDKGSSGIPGKE---------------------GPGGKPGKPGVKGE 501
Query: 416 IGPPGD------------AGSAGNDGPKGSQGPP----GPTGNIGPKGERG 520
G P + G G GPKG G P G G G KGE+G
Sbjct: 502 KGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVRARGDPGIQGIKGEKG 552
Score = 42.4 bits (98), Expect = 0.002
Identities = 36/111 (32%), Positives = 40/111 (36%), Gaps = 23/111 (20%)
Frame = +2
Query: 266 GPSGKLGDPGF-----PGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLIGPPG 430
G SG +G PGF PGRA G G G+ G G AG G PG
Sbjct: 572 GASGDVGSPGFGLPGLPGRA------------------GVPGLKGEKGNFGEAGPAGSPG 613
Query: 431 DAGSAGNDGPKGSQGPP------------------GPTGNIGPKGERGPKG 529
G G G KG++G P G G KGE GP G
Sbjct: 614 PPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPG 664
>sp|P35248|SFTPD_RAT Pulmonary surfactant-associated protein D precursor (SP-D) (PSP-D)
(CP4)
Length = 374
Score = 92.4 bits (228), Expect = 2e-18
Identities = 47/98 (47%), Positives = 51/98 (52%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PGR G+DG GP G+ GDPG PG G AGEPG G G G
Sbjct: 47 PGRDGRDGREGPRGEKGDPGLPGPMGLSGLPGPRGPVGPKGENGSAGEPGPKGERGLVGP 106
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG +G AG +GP G QG GP G GPKGE GPKG
Sbjct: 107 PGSPGISGPAGKEGPSGKQGNIGPQGKPGPKGEAGPKG 144
Score = 70.1 bits (170), Expect = 8e-12
Identities = 40/97 (41%), Positives = 48/97 (49%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G+ G G GP G++G PG G A G+ G PG+ G GNAG
Sbjct: 132 GKPGPKGEAGPKGEVGAPGMQGSAGAKGPAGPK---------GERGAPGEQGAPGNAGAA 182
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GP AG AG G GS+GPPG G+ G G+RG KG
Sbjct: 183 GP---AGPAGPQGAPGSRGPPGLKGDRGAPGDRGIKG 216
Score = 69.3 bits (168), Expect = 1e-11
Identities = 41/106 (38%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G G PGP G+ G G PG +IG G+PG G AG G +
Sbjct: 87 GENGSAGEPGPKGERGLVGPPGSPGISGPAGKEGPSGKQGNIGPQGKPGPKGEAGPKGEV 146
Query: 419 GPPGDAGSAGNDGP---------KGSQGPPGPTGNIGPKGERGPKG 529
G PG GSAG GP G QG PG G GP G GP+G
Sbjct: 147 GAPGMQGSAGAKGPAGPKGERGAPGEQGAPGNAGAAGPAGPAGPQG 192
Score = 63.5 bits (153), Expect = 8e-10
Identities = 36/94 (38%), Positives = 42/94 (44%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G +G G PGP G+ G G G G GE G PG AG AG
Sbjct: 126 GNIGPQGKPGPKGEAGPKGEVGAPGMQGSAGAKGPAGPKGERGAPGEQGAPGNAGAAGPA 185
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERG 520
GP G G+ G+ GP G +G G G+ G KGE G
Sbjct: 186 GPAGPQGAPGSRGPPGLKGDRGAPGDRGIKGESG 219
Score = 53.5 bits (127), Expect = 8e-07
Identities = 26/51 (50%), Positives = 28/51 (54%)
Frame = +2
Query: 377 EPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
E G PG G G GP G+ G G GP G G PGP G +GPKGE G G
Sbjct: 43 ENGLPGRDGRDGREGPRGEKGDPGLPGPMGLSGLPGPRGPVGPKGENGSAG 93
Score = 38.9 bits (89), Expect = 0.021
Identities = 22/60 (36%), Positives = 25/60 (41%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G GP GP+G G PG G GD G PGD G+ G +GL
Sbjct: 176 PGNAGAAGPAGPAGPQGAPGSRGPPGLK---------------GDRGAPGDRGIKGESGL 220
>sp|Q8MHZ9|CL46_BOVIN Collectin-46 precursor (CL-46) (46 kDa collectin)
Length = 371
Score = 92.4 bits (228), Expect = 2e-18
Identities = 47/98 (47%), Positives = 53/98 (54%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PGR G+DG GP G+ GDPG PG A GD G G+PG G+ G
Sbjct: 48 PGRDGQDGREGPQGEKGDPGSPGPAGRAGRPGPAGPIGPK---GDNGSAGEPGPKGDTGP 104
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G AG +GP G QG GP G GPKG+ GPKG
Sbjct: 105 PGPPGMPGPAGREGPSGKQGSMGPPGTPGPKGDTGPKG 142
Score = 75.9 bits (185), Expect = 2e-13
Identities = 42/101 (41%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAG---EPGDPGVAGN 406
PG G++GP G G +G PG PG S G AG E G PG G
Sbjct: 111 PGPAGREGPSGKQGSMGPPGTPGPKGDTGPKGGMGAPGMQGSPGPAGLKGERGAPGELGA 170
Query: 407 AGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G G AG+ G GP G++GPPG G+ G GERG KG
Sbjct: 171 PGSAGVAGPAGAIGPQGPSGARGPPGLKGDRGDPGERGAKG 211
Score = 60.1 bits (144), Expect = 9e-09
Identities = 30/57 (52%), Positives = 31/57 (54%)
Frame = +2
Query: 365 GDAGEPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G GE GDPG G AG G PG AG G G GS G PGP G+ GP G G G A
Sbjct: 58 GPQGEKGDPGSPGPAGRAGRPGPAGPIGPKGDNGSAGEPGPKGDTGPPGPPGMPGPA 114
Score = 55.5 bits (132), Expect = 2e-07
Identities = 26/51 (50%), Positives = 29/51 (56%)
Frame = +2
Query: 377 EPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
E G PG G G GP G+ G G+ GP G G PGP G IGPKG+ G G
Sbjct: 44 EGGLPGRDGQDGREGPQGEKGDPGSPGPAGRAGRPGPAGPIGPKGDNGSAG 94
>sp|P35246|SFTPD_BOVIN Pulmonary surfactant-associated protein D precursor (SP-D) (PSP-D)
Length = 369
Score = 92.4 bits (228), Expect = 2e-18
Identities = 47/98 (47%), Positives = 53/98 (54%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PGR G+DG GP G+ GDPG PG A GD G G+PG G+ G
Sbjct: 48 PGRDGRDGREGPRGEKGDPGSPGPAGRAGMPGPAGPIGLK---GDNGSAGEPGPKGDTGP 104
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G AG +GP G QG GP G GPKG+ GPKG
Sbjct: 105 PGPPGMPGPAGREGPSGKQGSMGPPGTPGPKGDTGPKG 142
Score = 79.3 bits (194), Expect = 1e-14
Identities = 43/101 (42%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAG---EPGDPGVAGN 406
PG G++GP G G +G PG PG S G AG E G PG G
Sbjct: 111 PGPAGREGPSGKQGSMGPPGTPGPKGDTGPKGGVGAPGIQGSPGPAGLKGERGAPGEPGA 170
Query: 407 AGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G PG AG+ G GP G++GPPG G+ G GERG KG
Sbjct: 171 PGRAGAPGPAGAIGPQGPSGARGPPGLKGDRGTPGERGAKG 211
Score = 70.1 bits (170), Expect = 8e-12
Identities = 39/103 (37%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
EPG G GPPGP G G G G + G G G PG+ G+ G
Sbjct: 95 EPGPKGDTGPPGPPGMPGPAGREGPSGKQGSMGPPGTPGPKGDTGPKGGVGAPGIQGSPG 154
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGE---RGPKGV 532
G G+ G+ G G G G PGP G IGP+G RGP G+
Sbjct: 155 PAGLKGERGAPGEPGAPGRAGAPGPAGAIGPQGPSGARGPPGL 197
Score = 51.6 bits (122), Expect = 3e-06
Identities = 25/51 (49%), Positives = 28/51 (54%)
Frame = +2
Query: 377 EPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
E G PG G G GP G+ G G+ GP G G PGP G IG KG+ G G
Sbjct: 44 EDGLPGRDGRDGREGPRGEKGDPGSPGPAGRAGMPGPAGPIGLKGDNGSAG 94
Score = 44.3 bits (103), Expect = 5e-04
Identities = 26/55 (47%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +2
Query: 374 GEPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGP---TGNIGPKGERGPKG 529
G PG G G G G GD GS G G G GP GP G+ G GE GPKG
Sbjct: 46 GLPGRDGRDGREGPRGEKGDPGSPGPAGRAGMPGPAGPIGLKGDNGSAGEPGPKG 100
Score = 38.1 bits (87), Expect = 0.036
Identities = 19/41 (46%), Positives = 20/41 (48%)
Frame = +2
Query: 410 GLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
GL G G G G G KG G PGP G G G GP G+
Sbjct: 46 GLPGRDGRDGREGPRGEKGDPGSPGPAGRAGMPGPAGPIGL 86
>sp|P50404|PSPD_MOUSE Pulmonary surfactant-associated protein D precursor (SP-D) (PSP-D)
Length = 374
Score = 91.3 bits (225), Expect = 4e-18
Identities = 47/98 (47%), Positives = 51/98 (52%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PGR G+DG GP G+ GDPG PG G AGEPG G G +G
Sbjct: 47 PGRDGRDGREGPRGEKGDPGLPGPMGLSGLQGPTGPVGPKGENGSAGEPGPKGERGLSGP 106
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG G AG +GP G QG GP G GPKGE GPKG
Sbjct: 107 PGLPGIPGPAGKEGPSGKQGNIGPQGKPGPKGEAGPKG 144
Score = 70.9 bits (172), Expect = 5e-12
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG GK+GP G G +G G PG S G G G G G G+
Sbjct: 113 PGPAGKEGPSGKQGNIGPQGKPGPKGEAGPKGEVGAPGMQGSTGAKGSTGPKGERGAPGV 172
Query: 416 IGPPGDAGSAGNDGPKG------SQGPPGPTGNIGPKGERGPKG 529
G PG+AG+AG GP G S+GPPG G+ G G+RG KG
Sbjct: 173 QGAPGNAGAAGPAGPAGPQGAPGSRGPPGLKGDRGVPGDRGIKG 216
Score = 67.4 bits (163), Expect = 5e-11
Identities = 40/102 (39%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G G PGP G+ G G PG +IG G+PG G AG G +
Sbjct: 87 GENGSAGEPGPKGERGLSGPPGLPGIPGPAGKEGPSGKQGNIGPQGKPGPKGEAGPKGEV 146
Query: 419 GPPGDAGSAG---NDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G PG GS G + GPKG +G PG G G G GP G A
Sbjct: 147 GAPGMQGSTGAKGSTGPKGERGAPGVQGAPGNAGAAGPAGPA 188
Score = 60.5 bits (145), Expect = 7e-09
Identities = 35/94 (37%), Positives = 41/94 (43%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G +G G PGP G+ G G G G G G PG AG AG
Sbjct: 126 GNIGPQGKPGPKGEAGPKGEVGAPGMQGSTGAKGSTGPKGERGAPGVQGAPGNAGAAGPA 185
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERG 520
GP G G+ G+ GP G +G G G+ G KGE G
Sbjct: 186 GPAGPQGAPGSRGPPGLKGDRGVPGDRGIKGESG 219
Score = 52.8 bits (125), Expect = 1e-06
Identities = 26/51 (50%), Positives = 28/51 (54%)
Frame = +2
Query: 377 EPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
E G PG G G GP G+ G G GP G G GPTG +GPKGE G G
Sbjct: 43 ENGLPGRDGRDGREGPRGEKGDPGLPGPMGLSGLQGPTGPVGPKGENGSAG 93
>sp|Q9XSJ7|CO1A1_CANFA Collagen alpha 1(I) chain precursor
Length = 1460
Score = 90.5 bits (223), Expect = 6e-18
Identities = 46/98 (46%), Positives = 53/98 (54%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG GK GPPGP+G+ G PG PG G G G+PG AG G+
Sbjct: 543 PGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFP------GPKGAAGEPGKAGERGV 596
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G AG DG G+QGPPGP G G +GE+GP G
Sbjct: 597 PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAG 634
Score = 84.0 bits (206), Expect = 6e-16
Identities = 50/123 (40%), Positives = 56/123 (45%), Gaps = 24/123 (19%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPG---FPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAG 403
+PGR G+ GPPGP G G PG PG G GEPG PG G
Sbjct: 233 KPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENG 292
Query: 404 NAGLIGP------------PGDAGSAGNDGPKGSQGPPGPTGNIGP---------KGERG 520
G +GP PG AG+ GNDG G+ GPPGPTG GP KGE G
Sbjct: 293 APGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAG 352
Query: 521 PKG 529
P+G
Sbjct: 353 PQG 355
Score = 81.6 bits (200), Expect = 3e-15
Identities = 62/239 (25%), Positives = 92/239 (38%), Gaps = 7/239 (2%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G GP GP+GK GD G G A G G+ G+ G G+ G+
Sbjct: 1044 PGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGARGPAGPQGPRGDKGETGEQGDRGI 1103
Query: 416 IGPPGDAGSAGNDGPKGS---QGPPGPTGNIGPKGERGPKGVAXXXXXXXXXXXXXXXXX 586
G G +G G GP GS QGP G +G GP+G G G
Sbjct: 1104 KGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGP 1163
Query: 587 XXXXXXXXXXXXXXXXXXXXXXXXXNTDFQNIF----KRQRTTDEEEQFQRDEPQAEQKS 754
+ F F +++ D ++ D+ +
Sbjct: 1164 RGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQEKAHDGGRYYRADDANVVR-- 1221
Query: 755 SIDPNDEDEDIFEALLRLSTIVDNLFKPPGSKTYPARSCADIQRDYNNKSNGMYYIDPN 931
D D ++ L LS ++N+ P GS+ PAR+C D++ +++ +G Y+IDPN
Sbjct: 1222 -----DRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDPN 1275
Score = 80.5 bits (197), Expect = 6e-15
Identities = 46/116 (39%), Positives = 53/116 (45%), Gaps = 18/116 (15%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G+ GPPGP+G G PG G+ GDAG GD G G AG
Sbjct: 795 PGDRGEPGPPGPAGFAGPPGADGQPGAKGEP------------GDAGAKGDAGPPGPAGP 842
Query: 416 IGPPGDAGSAGNDGPKGSQ------------------GPPGPTGNIGPKGERGPKG 529
GPPG G+ G GPKG++ GPPGP+GN GP G GP G
Sbjct: 843 TGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAG 898
Score = 78.6 bits (192), Expect = 2e-14
Identities = 42/105 (40%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSI-------GDAGEPGDPG 394
PG+ G GPPGP G G PG G S+ G G PG PG
Sbjct: 131 PGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISVPGPMGPSGPRGLPGPPG 190
Query: 395 VAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G GPPG+ G G GP G +GPPGP G G GE G G
Sbjct: 191 APGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPG 235
Score = 78.6 bits (192), Expect = 2e-14
Identities = 42/99 (42%), Positives = 44/99 (44%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
EPG G GPPG G G GFPG G G PG+ G G AG
Sbjct: 470 EPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAG 529
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
L G G GS G+ GP G GPPGP G G G GP G
Sbjct: 530 LPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPG 568
Score = 78.6 bits (192), Expect = 2e-14
Identities = 42/98 (42%), Positives = 46/98 (46%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G GPPGP G +G PG G G AG G PG +GNAG
Sbjct: 837 PGPAGPTGPPGPIGNVGAPGPKGARGSAGPPGATGFP------GAAGRVGPPGPSGNAGP 890
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG AG G G +G GP G G +GP G GP G
Sbjct: 891 PGPPGPAGKEGGKGARGETGPAGRPGEVGPPGPPGPAG 928
Score = 78.6 bits (192), Expect = 2e-14
Identities = 42/99 (42%), Positives = 48/99 (48%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G+ GPPGPSG G PG PG A G G G+ G AG G
Sbjct: 873 PGAAGRVGPPGPSGNAGPPGPPGPAGKE---------------GGKGARGETGPAGRPGE 917
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
+GPPG G AG G G+ GP G G GP+G G +GV
Sbjct: 918 VGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGV 956
Score = 77.8 bits (190), Expect = 4e-14
Identities = 48/124 (38%), Positives = 53/124 (42%), Gaps = 24/124 (19%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G GPPGP+G G G PG + GDAG PG PG G GL
Sbjct: 678 PGERGVQGPPGPAGPRGANGAPGN---------------DGAKGDAGAPGAPGSQGAPGL 722
Query: 416 IGPPGDAGSAGNDGPKGSQ------------------------GPPGPTGNIGPKGERGP 523
G PG+ G+AG GPKG + GPPGP G G KGE GP
Sbjct: 723 QGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEAGP 782
Query: 524 KGVA 535
G A
Sbjct: 783 SGPA 786
Score = 77.8 bits (190), Expect = 4e-14
Identities = 40/98 (40%), Positives = 44/98 (44%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG MG G GP G+ G G PG G AG PG PG G G
Sbjct: 993 PGPMGPPGLAGPPGESGREGSPGAEGSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGP 1052
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
+GP G G G GP G GP GP G GP G +GP+G
Sbjct: 1053 VGPAGKNGDRGETGPAGPAGPIGPVGARGPAGPQGPRG 1090
Score = 77.4 bits (189), Expect = 5e-14
Identities = 41/97 (42%), Positives = 43/97 (44%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G GP GP G G PG GR GD GE G G G G
Sbjct: 988 GERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRDGSPGPKGDRGETGPAGPPGAPGAP 1047
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG G AG +G +G GP GP G IGP G RGP G
Sbjct: 1048 GAPGPVGPAGKNGDRGETGPAGPAGPIGPVGARGPAG 1084
Score = 76.6 bits (187), Expect = 9e-14
Identities = 47/131 (35%), Positives = 52/131 (39%), Gaps = 33/131 (25%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG-- 412
G G GPPGP+G G PGFPG G GEPG PG AG AG
Sbjct: 322 GATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSEGPQGVRGEPGPPGPAGAAGPA 381
Query: 413 -------------------LIGPPGDAGSAGNDGPKGSQGPPGPTGN------------I 499
+ G PG G+ G GP+G GPPGP GN
Sbjct: 382 GNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDT 441
Query: 500 GPKGERGPKGV 532
G KGE GP G+
Sbjct: 442 GAKGEPGPTGI 452
Score = 75.9 bits (185), Expect = 2e-13
Identities = 47/111 (42%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG-- 412
G G GPPGP+G GD G G + GD GEPG PG AG AG
Sbjct: 760 GLTGPIGPPGPAGAPGDKGEAGPSGPAGPTGARGAP------GDRGEPGPPGPAGFAGPP 813
Query: 413 -------LIGPPGDAGS---AGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G PGDAG+ AG GP G GPPGP GN+G G +G +G A
Sbjct: 814 GADGQPGAKGEPGDAGAKGDAGPPGPAGPTGPPGPIGNVGAPGPKGARGSA 864
Score = 75.9 bits (185), Expect = 2e-13
Identities = 40/98 (40%), Positives = 46/98 (46%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG +G GPPGP+G+ G PG G A G G PG G+AG G+
Sbjct: 915 PGEVGPPGPPGPAGEKGSPGADGPA------------------GAPGTPGPQGIAGQRGV 956
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
+G PG G G G G G PG G G GERGP G
Sbjct: 957 VGLPGQRGERGFPGLPGPSGEPGKQGPSGTSGERGPPG 994
Score = 75.1 bits (183), Expect = 3e-13
Identities = 41/99 (41%), Positives = 44/99 (44%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
E G G+ GP G G+ G PG PG A G AG PG PG G G
Sbjct: 290 ENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKG 349
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GP G GS G G +G GPPGP G GP G G G
Sbjct: 350 EAGPQGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGADG 388
Score = 73.6 bits (179), Expect = 8e-13
Identities = 41/97 (42%), Positives = 48/97 (49%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G GPPGP G G+PG PG GD G G+PG G +
Sbjct: 415 GPQGPSGPPGPKGNSGEPGAPGNK------------------GDTGAKGEPGPTG---IQ 453
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG AG +G +G++G PGPTG GP GERG G
Sbjct: 454 GPPGPAGE---EGKRGARGEPGPTGLPGPPGERGGPG 487
Score = 72.4 bits (176), Expect = 2e-12
Identities = 40/100 (40%), Positives = 48/100 (48%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
EPG+ G+ G PGP G +G G G A G AG PG G+ G AG
Sbjct: 587 EPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAG 646
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
PPG+AG G G G G PGP+G G +G G +GV
Sbjct: 647 ---PPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGV 683
Score = 72.0 bits (175), Expect = 2e-12
Identities = 41/99 (41%), Positives = 46/99 (46%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G + GP GPSG G PG PG G GEPG+PG +G G
Sbjct: 169 GGISVPGPMGPSGPRGLPGPPGAPGPQGFQ------------GPPGEPGEPGASGPMGPR 216
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
GPPG G G+DG G G PG G GP+G RG G A
Sbjct: 217 GPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTA 255
Score = 71.6 bits (174), Expect = 3e-12
Identities = 39/97 (40%), Positives = 46/97 (47%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G GPPGP+G G+ G G A G+AG+PG+ GV G+ G
Sbjct: 610 GEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPP---GEAGKPGEQGVPGDLGAP 666
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GP G G G G +G QGPPGP G G G G G
Sbjct: 667 GPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDG 703
Score = 70.5 bits (171), Expect = 6e-12
Identities = 39/97 (40%), Positives = 42/97 (43%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G G PG G G G PG G G PG GV G G I
Sbjct: 706 GDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPI 765
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG AG+ G+ G G GP GPTG G G+RG G
Sbjct: 766 GPPGPAGAPGDKGEAGPSGPAGPTGARGAPGDRGEPG 802
Score = 70.1 bits (170), Expect = 8e-12
Identities = 40/101 (39%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G GP G G G PG G G G G PG GN+G
Sbjct: 372 PGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGE 431
Query: 416 IGPPG---DAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G PG D G+ G GP G QGPPGP G G +G RG G
Sbjct: 432 PGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPG 472
Score = 70.1 bits (170), Expect = 8e-12
Identities = 39/97 (40%), Positives = 43/97 (44%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G+ G PGP+G G PG GR S G G+ G PG AG G
Sbjct: 502 GPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRP 561
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G+ G G G GP G G G GERG G
Sbjct: 562 GPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 598
Score = 68.6 bits (166), Expect = 2e-11
Identities = 41/110 (37%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDP-------- 391
PG G GP G G G+PG PG + G+AG+PG P
Sbjct: 186 PGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 245
Query: 392 ----GVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G+ G AGL G G G +G DG KG GP GP G G GE G G
Sbjct: 246 QGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPG 295
Score = 67.4 bits (163), Expect = 5e-11
Identities = 37/95 (38%), Positives = 43/95 (45%)
Frame = +2
Query: 248 GKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLIGPP 427
G GP GP G G PG PG +G G PG PG G+ G G P
Sbjct: 175 GPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKP 234
Query: 428 GDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
G G G GP+G++G PG G G KG RG G+
Sbjct: 235 GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGL 269
Score = 66.6 bits (161), Expect = 9e-11
Identities = 39/100 (39%), Positives = 43/100 (43%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G+ G GPSG G+ G PG S G G PG G G G
Sbjct: 972 PGPSGEPGKQGPSGTSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRDGSPGPKGD 1031
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G G AG G G G+ GP GP G G +GE GP G A
Sbjct: 1032 RGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPA 1071
Score = 65.9 bits (159), Expect = 2e-10
Identities = 38/97 (39%), Positives = 46/97 (47%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G GPPG +GK G+ G PG + G+ G PG+ GV G G
Sbjct: 640 GLPGPAGPPGEAGKPGEQGVPG---------DLGAPGPSGARGERGFPGERGVQGPPGPA 690
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GP G G+ GNDG KG G PG G+ G G +G G
Sbjct: 691 GPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPG 727
Score = 65.5 bits (158), Expect = 2e-10
Identities = 39/98 (39%), Positives = 45/98 (45%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G MG GPPGP GK GD G G+ G AG PG G G +GL
Sbjct: 211 GPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLD 270
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
G GDAG P G +G PG G G G+ GP+G+
Sbjct: 271 GAKGDAG------PAGPKGEPGSPGENGAPGQMGPRGL 302
Score = 65.5 bits (158), Expect = 2e-10
Identities = 40/101 (39%), Positives = 45/101 (44%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
EPG G++G PG G G PG GR + G AG PG G AG G
Sbjct: 284 EPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDG---ATGAAGPPGPTGPAGPPG 340
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G G G AG G +GS+GP G G GP G G G A
Sbjct: 341 FPGAVGAKGEAGPQGARGSEGPQGVRGEPGPPGPAGAAGPA 381
Score = 65.1 bits (157), Expect = 3e-10
Identities = 41/106 (38%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL- 415
G G+ GPPGP+G G G PG + G AG PG PG G +G
Sbjct: 364 GVRGEPGPPGPAGAAGPAGNPGA------DGQPGAKGANGAPGIAGAPGFPGARGPSGPQ 417
Query: 416 --IGPPGDAGSA------GNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G++ GN G G++G PGPTG GP G G +G
Sbjct: 418 GPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEG 463
Score = 63.5 bits (153), Expect = 8e-10
Identities = 37/105 (35%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G G PGPSG+ G G G + G++G G PG G+ G
Sbjct: 964 GERGFPGLPGPSGEPGKQGPSGTSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRD 1023
Query: 419 GPPGDAGSAGNDGPKG------SQGPPGPTGNIGPKGERGPKGVA 535
G PG G G GP G + G PGP G G G+RG G A
Sbjct: 1024 GSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPA 1068
Score = 57.8 bits (138), Expect = 4e-08
Identities = 39/112 (34%), Positives = 42/112 (37%), Gaps = 13/112 (11%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGN---- 406
G G GPPG G G PG PG G G PG PG+ GN
Sbjct: 117 GPRGPAGPPGRDGIPGQPGLPGPP------------------GPPGPPGPPGLGGNFAPQ 158
Query: 407 ---------AGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G I PG G +G G G G PGP G GP GE G G +
Sbjct: 159 MSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGAS 210
Score = 46.6 bits (109), Expect = 1e-04
Identities = 24/52 (46%), Positives = 25/52 (48%)
Frame = +2
Query: 365 GDAGEPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERG 520
GD G G G AG G G PG G G GP G GPPG GN P+ G
Sbjct: 111 GDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYG 162
Score = 45.4 bits (106), Expect = 2e-04
Identities = 24/54 (44%), Positives = 25/54 (46%)
Frame = +2
Query: 365 GDAGEPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPK 526
G G GD G G G GPPG G G G G GPPGP G G G P+
Sbjct: 105 GVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQ 158
Score = 43.5 bits (101), Expect = 9e-04
Identities = 24/54 (44%), Positives = 25/54 (46%)
Frame = +2
Query: 368 DAGEPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
D G G G+ G GP G AG G DG G G PGP G GP G G G
Sbjct: 100 DQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGG 153
Score = 38.5 bits (88), Expect = 0.027
Identities = 21/50 (42%), Positives = 21/50 (42%)
Frame = +2
Query: 380 PGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
P D G G G G G G GP G G PG G GP G GP G
Sbjct: 98 PTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPG 147
Score = 33.1 bits (74), Expect = 1.1
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 380 PGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
PG G + P G+A + G +GP G TG GP+G GP G
Sbjct: 78 PGAQVPPGECCPVCPDGEASPTDQE-TTGVEGPKGDTGPRGPRGPAGPPG 126
>sp|P02452|CO1A1_HUMAN Collagen alpha 1(I) chain precursor
Length = 1464
Score = 90.5 bits (223), Expect = 6e-18
Identities = 46/98 (46%), Positives = 53/98 (54%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG GK GPPGP+G+ G PG PG G G G+PG AG G+
Sbjct: 547 PGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFP------GPKGAAGEPGKAGERGV 600
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G AG DG G+QGPPGP G G +GE+GP G
Sbjct: 601 PGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAG 638
Score = 84.0 bits (206), Expect = 6e-16
Identities = 50/123 (40%), Positives = 56/123 (45%), Gaps = 24/123 (19%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPG---FPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAG 403
+PGR G+ GPPGP G G PG PG G GEPG PG G
Sbjct: 237 KPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENG 296
Query: 404 NAGLIGP------------PGDAGSAGNDGPKGSQGPPGPTGNIGP---------KGERG 520
G +GP PG AG+ GNDG G+ GPPGPTG GP KGE G
Sbjct: 297 APGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAG 356
Query: 521 PKG 529
P+G
Sbjct: 357 PQG 359
Score = 83.6 bits (205), Expect = 7e-16
Identities = 62/239 (25%), Positives = 92/239 (38%), Gaps = 7/239 (2%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G GP GP+GK GD G G A G G+ G+ G G+ G+
Sbjct: 1048 PGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPAGARGPAGPQGPRGDKGETGEQGDRGI 1107
Query: 416 IGPPGDAGSAGNDGPKGS---QGPPGPTGNIGPKGERGPKGVAXXXXXXXXXXXXXXXXX 586
G G +G G GP GS QGP G +G GP+G G G
Sbjct: 1108 KGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGAPGKDGLNGLPGPIGPPGP 1167
Query: 587 XXXXXXXXXXXXXXXXXXXXXXXXXNTDFQNIF----KRQRTTDEEEQFQRDEPQAEQKS 754
+ F F +++ D ++ D+ +
Sbjct: 1168 RGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFSFLPQPPQEKAHDGGRYYRADDANVVR-- 1225
Query: 755 SIDPNDEDEDIFEALLRLSTIVDNLFKPPGSKTYPARSCADIQRDYNNKSNGMYYIDPN 931
D D ++ L LS ++N+ P GS+ PAR+C D++ +++ +G Y+IDPN
Sbjct: 1226 -----DRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDPN 1279
Score = 82.0 bits (201), Expect = 2e-15
Identities = 43/98 (43%), Positives = 47/98 (47%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G GPPGP G +G PG G G AG G PG +GNAG
Sbjct: 841 PGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFP------GAAGRVGPPGPSGNAGP 894
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG AG G GP+G GP G G +GP G GP G
Sbjct: 895 PGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAG 932
Score = 79.3 bits (194), Expect = 1e-14
Identities = 40/98 (40%), Positives = 45/98 (45%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG MG G GP G+ G G PG G AG PG PG G G
Sbjct: 997 PGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGP 1056
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
+GP G +G G GP G GP GP G GP G +GP+G
Sbjct: 1057 VGPAGKSGDRGETGPAGPAGPVGPAGARGPAGPQGPRG 1094
Score = 78.6 bits (192), Expect = 2e-14
Identities = 42/105 (40%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSI-------GDAGEPGDPG 394
PG+ G GPPGP G G PG G S+ G G PG PG
Sbjct: 135 PGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPG 194
Query: 395 VAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G G GPPG+ G G GP G +GPPGP G G GE G G
Sbjct: 195 APGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPG 239
Score = 78.6 bits (192), Expect = 2e-14
Identities = 42/99 (42%), Positives = 44/99 (44%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
EPG G GPPG G G GFPG G G PG+ G G AG
Sbjct: 474 EPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAG 533
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
L G G GS G+ GP G GPPGP G G G GP G
Sbjct: 534 LPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPG 572
Score = 78.6 bits (192), Expect = 2e-14
Identities = 42/99 (42%), Positives = 48/99 (48%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G+ GPPGPSG G PG PG A G G G+ G AG G
Sbjct: 877 PGAAGRVGPPGPSGNAGPPGPPGPAGKE---------------GGKGPRGETGPAGRPGE 921
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
+GPPG G AG G G+ GP G G GP+G G +GV
Sbjct: 922 VGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGV 960
Score = 77.8 bits (190), Expect = 4e-14
Identities = 45/118 (38%), Positives = 49/118 (41%), Gaps = 21/118 (17%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG-- 412
G G GPPGP+G G PGFPG G GEPG PG AG AG
Sbjct: 326 GATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPA 385
Query: 413 -------------------LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
+ G PG G+ G GP+G GPPGP GN G G G KG
Sbjct: 386 GNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKG 443
Score = 77.8 bits (190), Expect = 4e-14
Identities = 48/124 (38%), Positives = 53/124 (42%), Gaps = 24/124 (19%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G GPPGP+G G G PG + GDAG PG PG G GL
Sbjct: 682 PGERGVQGPPGPAGPRGANGAPGN---------------DGAKGDAGAPGAPGSQGAPGL 726
Query: 416 IGPPGDAGSAGNDGPKGSQ------------------------GPPGPTGNIGPKGERGP 523
G PG+ G+AG GPKG + GPPGP G G KGE GP
Sbjct: 727 QGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGP 786
Query: 524 KGVA 535
G A
Sbjct: 787 SGPA 790
Score = 75.9 bits (185), Expect = 2e-13
Identities = 47/111 (42%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG-- 412
G G GPPGP+G GD G G + GD GEPG PG AG AG
Sbjct: 764 GLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAP------GDRGEPGPPGPAGFAGPP 817
Query: 413 -------LIGPPGDAGS---AGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G PGDAG+ AG GP G GPPGP GN+G G +G +G A
Sbjct: 818 GADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSA 868
Score = 75.9 bits (185), Expect = 2e-13
Identities = 46/125 (36%), Positives = 53/125 (42%), Gaps = 27/125 (21%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKL---------GDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGD 388
PG G+ GP GP+G G+PG PG A GDAG GD
Sbjct: 778 PGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGD 837
Query: 389 PGVAGNAGLIGPPGDAGSAGNDGPKGSQ------------------GPPGPTGNIGPKGE 514
G G AG GPPG G+ G G KG++ GPPGP+GN GP G
Sbjct: 838 AGPPGPAGPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGP 897
Query: 515 RGPKG 529
GP G
Sbjct: 898 PGPAG 902
Score = 75.9 bits (185), Expect = 2e-13
Identities = 40/98 (40%), Positives = 46/98 (46%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG +G GPPGP+G+ G PG G A G G PG G+AG G+
Sbjct: 919 PGEVGPPGPPGPAGEKGSPGADGPA------------------GAPGTPGPQGIAGQRGV 960
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
+G PG G G G G G PG G G GERGP G
Sbjct: 961 VGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPG 998
Score = 75.5 bits (184), Expect = 2e-13
Identities = 41/99 (41%), Positives = 44/99 (44%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
E G G+ GP G G+ G PG PG A G AG PG PG G G
Sbjct: 294 ENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKG 353
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GP G GS G G +G GPPGP G GP G G G
Sbjct: 354 EAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADG 392
Score = 73.6 bits (179), Expect = 8e-13
Identities = 42/97 (43%), Positives = 49/97 (50%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G GPPGP G G+PG PG S GD G G+PG G +
Sbjct: 419 GPQGPGGPPGPKGNSGEPGAPG------------------SKGDTGAKGEPGPVG---VQ 457
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG AG +G +G++G PGPTG GP GERG G
Sbjct: 458 GPPGPAGE---EGKRGARGEPGPTGLPGPPGERGGPG 491
Score = 72.4 bits (176), Expect = 2e-12
Identities = 40/100 (40%), Positives = 48/100 (48%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
EPG+ G+ G PGP G +G G G A G AG PG G+ G AG
Sbjct: 591 EPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAG 650
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
PPG+AG G G G G PGP+G G +G G +GV
Sbjct: 651 ---PPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGV 687
Score = 72.0 bits (175), Expect = 2e-12
Identities = 41/99 (41%), Positives = 46/99 (46%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G + GP GPSG G PG PG G GEPG+PG +G G
Sbjct: 173 GGISVPGPMGPSGPRGLPGPPGAPGPQGFQ------------GPPGEPGEPGASGPMGPR 220
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
GPPG G G+DG G G PG G GP+G RG G A
Sbjct: 221 GPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTA 259
Score = 71.6 bits (174), Expect = 3e-12
Identities = 39/97 (40%), Positives = 46/97 (47%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G GPPGP+G G+ G G A G+AG+PG+ GV G+ G
Sbjct: 614 GEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPP---GEAGKPGEQGVPGDLGAP 670
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GP G G G G +G QGPPGP G G G G G
Sbjct: 671 GPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDG 707
Score = 71.2 bits (173), Expect = 4e-12
Identities = 43/109 (39%), Positives = 47/109 (43%), Gaps = 12/109 (11%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGF---PGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNA 409
G GK GP G SG+ G PG PG A S G G PG G G
Sbjct: 980 GEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGET 1039
Query: 410 GLIGPPGDAGS---------AGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G GPPG G+ AG G +G GP GP G +GP G RGP G
Sbjct: 1040 GPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPAGARGPAG 1088
Score = 70.9 bits (172), Expect = 5e-12
Identities = 39/97 (40%), Positives = 42/97 (43%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G G PG G G G PG G G PG GV G G I
Sbjct: 710 GDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPI 769
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG AG+ G+ G G GP GPTG G G+RG G
Sbjct: 770 GPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPG 806
Score = 70.1 bits (170), Expect = 8e-12
Identities = 39/97 (40%), Positives = 43/97 (44%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G+ G PGP+G G PG GR S G G+ G PG AG G
Sbjct: 506 GPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRP 565
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GPPG G+ G G G GP G G G GERG G
Sbjct: 566 GPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602
Score = 68.6 bits (166), Expect = 2e-11
Identities = 41/110 (37%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDP-------- 391
PG G GP G G G+PG PG + G+AG+PG P
Sbjct: 190 PGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGP 249
Query: 392 ----GVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
G+ G AGL G G G +G DG KG GP GP G G GE G G
Sbjct: 250 QGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPG 299
Score = 68.6 bits (166), Expect = 2e-11
Identities = 41/101 (40%), Positives = 46/101 (45%)
Frame = +2
Query: 233 EPGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAG 412
EPG G++G PG G G PG GR + G AG PG G AG G
Sbjct: 288 EPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDG---ATGAAGPPGPTGPAGPPG 344
Query: 413 LIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G G G AG GP+GS+GP G G GP G G G A
Sbjct: 345 FPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPA 385
Score = 67.8 bits (164), Expect = 4e-11
Identities = 38/97 (39%), Positives = 47/97 (48%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G+ GP GP G G PG PG +G AG+ GD G G AG
Sbjct: 1034 GDRGETGPAGPPGAPGAPGAPG------------------PVGPAGKSGDRGETGPAGPA 1075
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GP G AG+ G GP+G +G G TG G +G +G +G
Sbjct: 1076 GPVGPAGARGPAGPQGPRGDKGETGEQGDRGIKGHRG 1112
Score = 67.4 bits (163), Expect = 5e-11
Identities = 37/95 (38%), Positives = 43/95 (45%)
Frame = +2
Query: 248 GKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLIGPP 427
G GP GP G G PG PG +G G PG PG G+ G G P
Sbjct: 179 GPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKP 238
Query: 428 GDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
G G G GP+G++G PG G G KG RG G+
Sbjct: 239 GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGL 273
Score = 65.9 bits (159), Expect = 2e-10
Identities = 38/97 (39%), Positives = 46/97 (47%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G G GPPG +GK G+ G PG + G+ G PG+ GV G G
Sbjct: 644 GLPGPAGPPGEAGKPGEQGVPG---------DLGAPGPSGARGERGFPGERGVQGPPGPA 694
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
GP G G+ GNDG KG G PG G+ G G +G G
Sbjct: 695 GPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPG 731
Score = 65.5 bits (158), Expect = 2e-10
Identities = 39/98 (39%), Positives = 45/98 (45%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGLI 418
G MG GPPGP GK GD G G+ G AG PG G G +GL
Sbjct: 215 GPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLD 274
Query: 419 GPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGV 532
G GDAG P G +G PG G G G+ GP+G+
Sbjct: 275 GAKGDAG------PAGPKGEPGSPGENGAPGQMGPRGL 306
Score = 62.4 bits (150), Expect = 2e-09
Identities = 39/100 (39%), Positives = 43/100 (43%)
Frame = +2
Query: 236 PGRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGNAGL 415
PG G+ G GPSG G+ G PG G AG PG+ G G G
Sbjct: 976 PGPSGEPGKQGPSGASGERGPPGPMGPP---------------GLAGPPGESGREGAPGA 1020
Query: 416 IGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G PG GS G G +G GP GP G G G GP G A
Sbjct: 1021 EGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPA 1060
Score = 57.8 bits (138), Expect = 4e-08
Identities = 39/112 (34%), Positives = 42/112 (37%), Gaps = 13/112 (11%)
Frame = +2
Query: 239 GRMGKDGPPGPSGKLGDPGFPGRAXXXXXXXXXXXXXXXXSIGDAGEPGDPGVAGN---- 406
G G GPPG G G PG PG G G PG PG+ GN
Sbjct: 121 GPRGPAGPPGRDGIPGQPGLPGPP------------------GPPGPPGPPGLGGNFAPQ 162
Query: 407 ---------AGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKGVA 535
G I PG G +G G G G PGP G GP GE G G +
Sbjct: 163 LSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGAS 214
Score = 46.2 bits (108), Expect = 1e-04
Identities = 23/48 (47%), Positives = 24/48 (50%)
Frame = +2
Query: 365 GDAGEPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPK 508
GD G G G AG G G PG G G GP G GPPG GN P+
Sbjct: 115 GDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQ 162
Score = 45.4 bits (106), Expect = 2e-04
Identities = 24/54 (44%), Positives = 25/54 (46%)
Frame = +2
Query: 365 GDAGEPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPK 526
G G GD G G G GPPG G G G G GPPGP G G G P+
Sbjct: 109 GVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQ 162
Score = 43.5 bits (101), Expect = 9e-04
Identities = 24/54 (44%), Positives = 25/54 (46%)
Frame = +2
Query: 368 DAGEPGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
D G G G+ G GP G AG G DG G G PGP G GP G G G
Sbjct: 104 DQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGG 157
Score = 38.5 bits (88), Expect = 0.027
Identities = 21/50 (42%), Positives = 21/50 (42%)
Frame = +2
Query: 380 PGDPGVAGNAGLIGPPGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
P D G G G G G G GP G G PG G GP G GP G
Sbjct: 102 PTDQETTGVEGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGPPGPPG 151
Score = 30.8 bits (68), Expect = 5.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 425 PGDAGSAGNDGPKGSQGPPGPTGNIGPKGERGPKG 529
P + S + G +GP G TG GP+G GP G
Sbjct: 96 PDGSESPTDQETTGVEGPKGDTGPRGPRGPAGPPG 130
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,931,600
Number of Sequences: 369166
Number of extensions: 1581021
Number of successful extensions: 46882
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17175
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9606826000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)