Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_E04
(842 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 181 3e-45
sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 179 9e-45
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 176 7e-44
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 173 5e-43
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 172 8e-43
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 172 1e-42
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 163 6e-40
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 161 2e-39
sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 161 2e-39
sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (C... 160 4e-39
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 181 bits (458), Expect = 3e-45
Identities = 91/177 (51%), Positives = 113/177 (63%), Gaps = 1/177 (0%)
Frame = +3
Query: 6 YKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEFKAK 185
+K T R Y + RR +WE+N+K I+ HN EY GKH +++ +N F DMTNEEF+
Sbjct: 32 WKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQV 91
Query: 186 YLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEG 365
G K +G + P +P SVDWR+KGYVTPVKNQ QCGSCW+FSATG+LEG
Sbjct: 92 MNGFQNQKHK-KGKMFQEPL-FAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEG 149
Query: 366 QYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYPLYG 533
Q FRK +L+S SEQ LVDCS LMDNAFRY+KD G++SE YP G
Sbjct: 150 QMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLG 206
Score = 116 bits (290), Expect = 9e-26
Identities = 61/110 (55%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Frame = +1
Query: 523 PYTATDG-TCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 699
PY D TC P TGF D+ Q E L AVAT+GP+SVAIDAGH SFQ YK
Sbjct: 203 PYLGRDTETCNYKPECSAANDTGFVDLP-QREKALMKAVATLGPISVAIDAGHQSFQFYK 261
Query: 700 SGIYNEESCSTTQLDHGVLAVGY---GTQIGKKYWIVKNSWDVTWGESGY 840
SGIY + CS+ LDHGVL VGY GT K+WIVKNSW WG +GY
Sbjct: 262 SGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGY 311
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor
Length = 326
Score = 179 bits (454), Expect = 9e-45
Identities = 86/173 (49%), Positives = 112/173 (64%)
Frame = +3
Query: 6 YKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEFKAK 185
+K + ++Y+ D RR IWE+N+K+IQ+HNL +DLG TY+LGLNQF DMT EEFKAK
Sbjct: 24 WKRMYNKEYNGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAK 83
Query: 186 YLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEG 365
YL M + N +P +DWR+ GYVT VK+Q CGSCW+FS TG++EG
Sbjct: 84 YLTEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEG 143
Query: 366 QYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQGIESEGDYP 524
QY + ISFSEQQLVDCS LM+NA++Y+K G+E+E YP
Sbjct: 144 QYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYP 196
Score = 113 bits (282), Expect = 7e-25
Identities = 52/106 (49%), Positives = 68/106 (64%)
Frame = +1
Query: 523 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 702
PYTA +G C+ N V K TG+ + S +E +L N V P +VA+D + F +Y+S
Sbjct: 196 PYTAVEGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDV-ESDFMMYRS 254
Query: 703 GIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWGESGY 840
GIY ++CS +++H VLAVGYGTQ G YWIVKNSW WGE GY
Sbjct: 255 GIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGY 300
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 176 bits (446), Expect = 7e-44
Identities = 90/177 (50%), Positives = 113/177 (63%), Gaps = 1/177 (0%)
Frame = +3
Query: 6 YKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEFKAK 185
+K T GR Y + RR +WE+N+K I+ HN EY GKH +S+ +N F DMTNEEF+
Sbjct: 32 WKATHGRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQV 91
Query: 186 YLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEG 365
G K +G + + V P SVDWR+KGYVT VKNQ QCGSCW+FSATG+LEG
Sbjct: 92 MNGFQNQKHK-KGKVFHESLVLEV-PKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEG 149
Query: 366 QYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYPLYG 533
Q FRK +L+S SEQ LVDCS LMDNAF+Y+KD G+++E YP G
Sbjct: 150 QMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLG 206
Score = 114 bits (284), Expect = 4e-25
Identities = 60/111 (54%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Frame = +1
Query: 523 PYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 699
PY + +C P TGF DI Q E L AVATVGP+SVAIDAGH+SFQ YK
Sbjct: 203 PYLGRETNSCTYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHSSFQFYK 261
Query: 700 SGIYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKNSWDVTWGESGY 840
SGIY + CS+ LDHGVL VGYG + K+WIVKNSW WG +GY
Sbjct: 262 SGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGY 312
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 173 bits (439), Expect = 5e-43
Identities = 90/174 (51%), Positives = 109/174 (62%), Gaps = 1/174 (0%)
Frame = +3
Query: 6 YKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEFKAK 185
+K T R Y + RR +WE+N K I HN EY GKH + + +N F DMTNEEF+
Sbjct: 32 WKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQEYSEGKHAFRMAMNAFGDMTNEEFRQV 91
Query: 186 YLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEG 365
G K +G + P + V P SVDW +KGYVTPVKNQ QCGSCW+FSATG+LEG
Sbjct: 92 MNGFQNQKHK-KGKLFHEPLLVDV-PKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEG 149
Query: 366 QYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYP 524
Q FRK +L+S SEQ LVDCS LMDNAF+YIKD G++SE YP
Sbjct: 150 QMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYP 203
Score = 118 bits (296), Expect = 2e-26
Identities = 63/111 (56%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Frame = +1
Query: 523 PYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYK 699
PY ATD +C P TGF DI Q E L AVATVGP+SVAIDAGH SFQ YK
Sbjct: 203 PYLATDTNSCNYKPECSAANDTGFVDIP-QREKALMKAVATVGPISVAIDAGHTSFQFYK 261
Query: 700 SGIYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKNSWDVTWGESGY 840
SGIY + CS LDHGVL VGYG + K+WIVKNSW WG +GY
Sbjct: 262 SGIYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGY 312
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 172 bits (437), Expect = 8e-43
Identities = 88/174 (50%), Positives = 111/174 (63%), Gaps = 1/174 (0%)
Frame = +3
Query: 6 YKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEFKAK 185
+K R Y + RR +WE+N+K I+ HN EY GKH++++ +N F DMT+EEF+
Sbjct: 32 WKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQV 91
Query: 186 YLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEG 365
G KP +G + P P SVDWR+KGYVTPVKNQ QCGSCW+FSATG+LEG
Sbjct: 92 MNGFQNRKPR-KGKVFQEPLFYEA-PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEG 149
Query: 366 QYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYP 524
Q FRK RLIS SEQ LVDCS LMD AF+Y++D G++SE YP
Sbjct: 150 QMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYP 203
Score = 124 bits (311), Expect = 3e-28
Identities = 63/110 (57%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Frame = +1
Query: 523 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 702
PY AT+ +CK NP V TGF DI Q E L AVATVGP+SVAIDAGH SF YK
Sbjct: 203 PYEATEESCKYNPKYSVANDTGFVDIPKQ-EKALMKAVATVGPISVAIDAGHESFLFYKE 261
Query: 703 GIYNEESCSTTQLDHGVLAVGYGTQI----GKKYWIVKNSWDVTWGESGY 840
GIY E CS+ +DHGVL VGYG + KYW+VKNSW WG GY
Sbjct: 262 GIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGY 311
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 172 bits (436), Expect = 1e-42
Identities = 85/174 (48%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Frame = +3
Query: 6 YKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEFKAK 185
+K T R Y + RR +WE+N+K I+ HN EY GKH +++ +N F DMTNEEF+ +
Sbjct: 32 WKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFR-Q 90
Query: 186 YLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEG 365
+G + + +G + P + LP SVDWR+KGYVTPVKNQ+QCGSCW+FSATG+LEG
Sbjct: 91 MMGCFRNQKFRKGKVFREPLFLD-LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEG 149
Query: 366 QYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYP 524
Q FRK +L+S SEQ LVDCS M AF+Y+K+ G++SE YP
Sbjct: 150 QMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYP 203
Score = 127 bits (318), Expect = 5e-29
Identities = 62/110 (56%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Frame = +1
Query: 523 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 702
PY A D CK P V TGFT + E L AVATVGP+SVA+DAGH+SFQ YKS
Sbjct: 203 PYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKS 262
Query: 703 GIYNEESCSTTQLDHGVLAVGYG----TQIGKKYWIVKNSWDVTWGESGY 840
GIY E CS+ LDHGVL VGYG KYW+VKNSW WG +GY
Sbjct: 263 GIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGY 312
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 163 bits (412), Expect = 6e-40
Identities = 87/174 (50%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Frame = +3
Query: 6 YKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEFKAK 185
+K+T R Y + RR IWE+N++ IQ HN EY G+H +S+ +N F DMTNEEF+
Sbjct: 32 WKSTHRRLYGTNEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQV 91
Query: 186 YLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEG 365
G K +G + P + + P SVDWR+KG VTPVKNQ QCGSCW+FSA+G LEG
Sbjct: 92 VNGYRHQKHK-KGRLFQEPLMLKI-PKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEG 149
Query: 366 QYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYP 524
Q F K +LIS SEQ LVDCS LMD AF+YIK+ G++SE YP
Sbjct: 150 QMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYP 203
Score = 118 bits (296), Expect = 2e-26
Identities = 63/110 (57%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Frame = +1
Query: 523 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 702
PY A DG+CK V TGF DI Q E L AVATVGP+SVA+DA H S Q Y S
Sbjct: 203 PYEAKDGSCKYRAEFAVANDTGFVDIPQQ-EKALMKAVATVGPISVAMDASHPSLQFYSS 261
Query: 703 GIYNEESCSTTQLDHGVLAVGY---GTQIGK-KYWIVKNSWDVTWGESGY 840
GIY E +CS+ LDHGVL VGY GT K KYW+VKNSW WG GY
Sbjct: 262 GIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNKYWLVKNSWGSEWGMEGY 311
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 161 bits (408), Expect = 2e-39
Identities = 85/174 (48%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Frame = +3
Query: 6 YKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEFKAK 185
+K+T R Y + RR +WE+N++ IQ HN EY GKH +++ +N F DMTNEEF+
Sbjct: 32 WKSTHRRLYGTNEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQI 91
Query: 186 YLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSLEG 365
G K +G + P + + P +VDWR+KG VTPVKNQ QCGSCW+FSA+G LEG
Sbjct: 92 VNGYRHQKHK-KGRLFQEPLMLQI-PKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEG 149
Query: 366 QYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDYP 524
Q F K +LIS SEQ LVDCS LMD AF+YIK+ G++SE YP
Sbjct: 150 QMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYP 203
Score = 119 bits (298), Expect = 1e-26
Identities = 63/110 (57%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Frame = +1
Query: 523 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 702
PY A DG+CK V TGF DI Q E L AVATVGP+SVA+DA H S Q Y S
Sbjct: 203 PYEAKDGSCKYRAEYAVANDTGFVDIPQQ-EKALMKAVATVGPISVAMDASHPSLQFYSS 261
Query: 703 GIYNEESCSTTQLDHGVLAVGY---GTQIGK-KYWIVKNSWDVTWGESGY 840
GIY E +CS+ LDHGVL VGY GT K KYW+VKNSW WG GY
Sbjct: 262 GIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDKYWLVKNSWGKEWGMDGY 311
>sp|P61277|CATK_MACMU Cathepsin K precursor
sp|P61276|CATK_MACFA Cathepsin K precursor
Length = 329
Score = 161 bits (408), Expect = 2e-39
Identities = 87/179 (48%), Positives = 112/179 (62%), Gaps = 3/179 (1%)
Frame = +3
Query: 6 YKTTFGRKYDELTD-ITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEFKA 182
+K T ++Y+ D I+RRLIWE+NLKYI HNLE LG HTY L +N DMTNEE
Sbjct: 29 WKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQ 88
Query: 183 KYLGI-MKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSL 359
K G+ + + T P+ G P SVD+R+KGYVTPVKNQ QCGSCW+FS+ G+L
Sbjct: 89 KMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGAL 148
Query: 360 EGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYI-KDQGIESEGDYPLYG 533
EGQ +K +L++ S Q LVDC M NAF+Y+ K++GI+SE YP G
Sbjct: 149 EGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVG 205
Score = 123 bits (309), Expect = 6e-28
Identities = 56/106 (52%), Positives = 68/106 (64%)
Frame = +1
Query: 523 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 702
PY + +C NP+ KC G+ +I NE L AVA VGPVSVAIDA SFQ Y
Sbjct: 202 PYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSK 261
Query: 703 GIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWGESGY 840
G+Y +ESC++ L+H VLAVGYG Q G K+WI+KNSW WG GY
Sbjct: 262 GVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGY 307
>sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (Cathepsin X) (Cathepsin O2)
Length = 329
Score = 160 bits (405), Expect = 4e-39
Identities = 87/179 (48%), Positives = 112/179 (62%), Gaps = 3/179 (1%)
Frame = +3
Query: 6 YKTTFGRKYDELTD-ITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEFKA 182
+K T ++Y+ D I+RRLIWE+NLKYI HNLE LG HTY L +N DMT+EE
Sbjct: 29 WKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQ 88
Query: 183 KYLGI-MKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGSL 359
K G+ + + T PE G P SVD+R+KGYVTPVKNQ QCGSCW+FS+ G+L
Sbjct: 89 KMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGAL 148
Query: 360 EGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYI-KDQGIESEGDYPLYG 533
EGQ +K +L++ S Q LVDC M NAF+Y+ K++GI+SE YP G
Sbjct: 149 EGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVG 205
Score = 123 bits (309), Expect = 6e-28
Identities = 56/106 (52%), Positives = 68/106 (64%)
Frame = +1
Query: 523 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 702
PY + +C NP+ KC G+ +I NE L AVA VGPVSVAIDA SFQ Y
Sbjct: 202 PYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSK 261
Query: 703 GIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWGESGY 840
G+Y +ESC++ L+H VLAVGYG Q G K+WI+KNSW WG GY
Sbjct: 262 GVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGY 307
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,067,596
Number of Sequences: 369166
Number of extensions: 1912561
Number of successful extensions: 5640
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5275
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)