Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_D13
(913 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O35186|CATK_RAT Cathepsin K precursor 292 1e-78
sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein) 290 4e-78
sp|Q9GLE3|CATK_PIG Cathepsin K precursor 288 1e-77
sp|P55097|CATK_MOUSE Cathepsin K precursor 287 2e-77
sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 286 4e-77
sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precu... 285 1e-76
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 284 2e-76
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 284 3e-76
sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (C... 283 4e-76
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 283 5e-76
>sp|O35186|CATK_RAT Cathepsin K precursor
Length = 329
Score = 292 bits (747), Expect = 1e-78
Identities = 146/303 (48%), Positives = 195/303 (64%), Gaps = 4/303 (1%)
Frame = +1
Query: 16 FVVAHVAPHKLTVNSELNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESD 192
F++ V L+ L+ WE +K GK+Y S ++EISRRLIWE NLK I HN+E+
Sbjct: 6 FLLLPVVSFALSPEETLDTQWELWKKTHGKQYNSKVDEISRRLIWEKNLKKISVHNLEAS 65
Query: 193 LGKHTYTLGLNHFADMTNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEG 366
LG HTY L +NH DMT+EE K L VPPSR + P+ G++PD++D+R +G
Sbjct: 66 LGAHTYELAMNHLGDMTSEEVVQKMTGLRVPPSRSFSNDTLYTPEWEGRVPDSIDYRKKG 125
Query: 367 YVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMD 546
YVTPVKNQ QCGSCW+FS+ G+LEGQ +KTG L + S Q LVD M
Sbjct: 126 YVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVSENYGCGGGY--MT 183
Query: 547 NAFEYIEKFG-IESEDAYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVG 723
AF+Y+++ G I+SEDAYPY +D +C+Y+ + C GY +IP G+E +L A A VG
Sbjct: 184 TAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVG 243
Query: 724 PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLVKNSWGTVWG 903
P+SV+IDAS SFQ Y G+Y + +C ++H VLVVGYGT+ G+ YW++KNSWG WG
Sbjct: 244 PVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGESWG 303
Query: 904 IDG 912
G
Sbjct: 304 NKG 306
>sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein)
Length = 329
Score = 290 bits (742), Expect = 4e-78
Identities = 143/287 (49%), Positives = 189/287 (65%), Gaps = 4/287 (1%)
Frame = +1
Query: 64 LNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADM 240
L+ WE +K + K+Y S ++EISRRLIWE NLK+I HN+E+ LG HTY L +NH DM
Sbjct: 22 LDTQWELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDM 81
Query: 241 TNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWS 414
T+EE K L VPPSR + P G+ PD++D+R +GYVTPVKNQ QCGSCW+
Sbjct: 82 TSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWA 141
Query: 415 FSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIEKF-GIESED 591
FS+ G+LEGQ +KTG L + S Q LVD M NAF+Y+++ GI+SED
Sbjct: 142 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENYGCGGGY--MTNAFQYVQRNRGIDSED 199
Query: 592 AYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLY 771
AYPY +D +C+Y+ + C GY +IP G+E +L A A VGP+SVAIDAS SFQ Y
Sbjct: 200 AYPYVGQDESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 259
Query: 772 KSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLVKNSWGTVWGIDG 912
G+Y + +CSS ++H VL VGYG + G+ +W++KNSWG WG G
Sbjct: 260 SKGVYYDENCSSDNVNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKG 306
>sp|Q9GLE3|CATK_PIG Cathepsin K precursor
Length = 330
Score = 288 bits (738), Expect = 1e-77
Identities = 143/287 (49%), Positives = 187/287 (65%), Gaps = 4/287 (1%)
Frame = +1
Query: 64 LNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADM 240
L+ WE +K + K+Y S ++EISRRLIWE NLK+I HN+E+ LG HTY L +NH DM
Sbjct: 23 LDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDM 82
Query: 241 TNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWS 414
T+EE K L VPPS + + P G+ PD++D+R +GYVTPVKNQ QCGSCW+
Sbjct: 83 TSEEVVQKMTGLKVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWA 142
Query: 415 FSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIEKF-GIESED 591
FS+ G+LEGQ +KTG L + S Q LVD M NAF+Y++K GI+SED
Sbjct: 143 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGY--MTNAFQYVQKNRGIDSED 200
Query: 592 AYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLY 771
AYPY +D C+Y+ + C GY +IP G+E +L A A VGP+SVAIDAS SFQ Y
Sbjct: 201 AYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 260
Query: 772 KSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLVKNSWGTVWGIDG 912
G+Y + +C+S L+H VL VGYG + G +W++KNSWG WG G
Sbjct: 261 SKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKG 307
>sp|P55097|CATK_MOUSE Cathepsin K precursor
Length = 329
Score = 287 bits (735), Expect = 2e-77
Identities = 144/303 (47%), Positives = 194/303 (64%), Gaps = 4/303 (1%)
Frame = +1
Query: 16 FVVAHVAPHKLTVNSELNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESD 192
F++ + L+ L+ WE +K K+Y S ++EISRRLIWE NLK I HN+E+
Sbjct: 6 FLLLPMVSFALSPEEMLDTQWELWKKTHQKQYNSKVDEISRRLIWEKNLKQISAHNLEAS 65
Query: 193 LGKHTYTLGLNHFADMTNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEG 366
LG HTY L +NH DMT+EE K L +PPSR + P+ G++PD++D+R +G
Sbjct: 66 LGVHTYELAMNHLGDMTSEEVVQKMTGLRIPPSRSYSNDTLYTPEWEGRVPDSIDYRKKG 125
Query: 367 YVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMD 546
YVTPVKNQ QCGSCW+FS+ G+LEGQ +KTG L + S Q LVD M
Sbjct: 126 YVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTENYGCGGGY--MT 183
Query: 547 NAFEYIEKFG-IESEDAYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVG 723
AF+Y+++ G I+SEDAYPY +D +C+Y+ + C GY +IP G+E +L A A VG
Sbjct: 184 TAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVG 243
Query: 724 PISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLVKNSWGTVWG 903
PISV+IDAS SFQ Y G+Y + +C ++H VLVVGYGT+ GS +W++KNSWG WG
Sbjct: 244 PISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGESWG 303
Query: 904 IDG 912
G
Sbjct: 304 NKG 306
>sp|P61277|CATK_MACMU Cathepsin K precursor
sp|P61276|CATK_MACFA Cathepsin K precursor
Length = 329
Score = 286 bits (733), Expect = 4e-77
Identities = 144/287 (50%), Positives = 186/287 (64%), Gaps = 4/287 (1%)
Frame = +1
Query: 64 LNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADM 240
L+ WE +K K+Y S ++EISRRLIWE NLKYI HN+E+ LG HTY L +NH DM
Sbjct: 22 LDTHWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDM 81
Query: 241 TNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWS 414
TNEE K L VP S + + P G+ PD+VD+R +GYVTPVKNQ QCGSCW+
Sbjct: 82 TNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWA 141
Query: 415 FSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIEKF-GIESED 591
FS+ G+LEGQ +KTG L + S Q LVD M NAF+Y++K GI+SED
Sbjct: 142 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGY--MTNAFQYVQKNRGIDSED 199
Query: 592 AYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLY 771
AYPY ++ +C+Y+ + C GY +IP G+E +L A A VGP+SVAIDAS SFQ Y
Sbjct: 200 AYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 259
Query: 772 KSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLVKNSWGTVWGIDG 912
G+Y + C+S L+H VL VGYG + G+ +W++KNSWG WG G
Sbjct: 260 SKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKG 306
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
Length = 323
Score = 285 bits (729), Expect = 1e-76
Identities = 143/281 (50%), Positives = 183/281 (65%), Gaps = 2/281 (0%)
Frame = +1
Query: 76 WESYKIKFGKKYESLNEIS-RRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEE 252
WE +K K+G++Y E S RR+I+E N KYI++ N + + G+ T+ L +N F DMT EE
Sbjct: 20 WEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEE 79
Query: 253 FRAKYLSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGS 432
F A P R +VF K G VDWRT+G VTPVK+Q QCGSCW+FS TGS
Sbjct: 80 FNAVMKGNIPRRSAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGS 139
Query: 433 LEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIE-KFGIESEDAYPYTA 609
LEGQHF KTG+L S +EQQLVD M++AF+YI+ GI++E AYPY A
Sbjct: 140 LEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEA 199
Query: 610 EDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYN 789
DG+C +D + V +C+G+ +I GSET L A +GPISV IDA++ SFQ Y SG+Y
Sbjct: 200 RDGSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYY 259
Query: 790 EPDCSSTQLDHGVLVVGYGTEDGSNYWLVKNSWGTVWGIDG 912
EP CS + LDH VL VGYG+E G ++WLVKNSW T WG G
Sbjct: 260 EPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAG 300
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 284 bits (727), Expect = 2e-76
Identities = 150/299 (50%), Positives = 186/299 (62%), Gaps = 5/299 (1%)
Frame = +1
Query: 31 VAPHKLTVNSELNDDWESYKIKFGKKYESLNEISRRLIWESNLKYIQKHNIESDLGKHTY 210
+A LT + L W +K + Y E RR +WE N+K I+ HN E GKH++
Sbjct: 14 IASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSF 73
Query: 211 TLGLNHFADMTNEEFRAKYLSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQ 390
T+ +N F DMT+EEFR + + VF P + P +VDWR +GYVTPVKNQ
Sbjct: 74 TMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPL-FYEAPRSVDWREKGYVTPVKNQ 132
Query: 391 EQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYI-E 567
QCGSCW+FSATG+LEGQ FRKTG L S SEQ LVD LMD AF+Y+ +
Sbjct: 133 GQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQD 192
Query: 568 KFGIESEDAYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDA 747
G++SE++YPY A + +C Y+ V + TG+VDIP E +L A ATVGPISVAIDA
Sbjct: 193 NGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDA 251
Query: 748 SNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTE----DGSNYWLVKNSWGTVWGIDG 912
+ SF YK GIY EPDCSS +DHGVLVVGYG E D + YWLVKNSWG WG+ G
Sbjct: 252 GHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGG 310
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 284 bits (726), Expect = 3e-76
Identities = 152/307 (49%), Positives = 188/307 (61%), Gaps = 5/307 (1%)
Frame = +1
Query: 7 ALVFVVAHVAPHKLTVNSELNDDWESYKIKFGKKYESLNEISRRLIWESNLKYIQKHNIE 186
AL +A AP + LN W +K + Y E RR +WE N+K I+ HN E
Sbjct: 9 ALCLGIASAAPK---FDQSLNAQWYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNRE 65
Query: 187 SDLGKHTYTLGLNHFADMTNEEFRAKYLSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEG 366
GKH +T+ +N F DMTNEEFR + K +F P ++P +VDWR +G
Sbjct: 66 YSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQEPL-FAEIPKSVDWREKG 124
Query: 367 YVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMD 546
YVTPVKNQ QCGSCW+FSATG+LEGQ FRKTG L S SEQ LVD LMD
Sbjct: 125 YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMD 184
Query: 547 NAFEYI-EKFGIESEDAYPYTAED-GTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATV 720
NAF Y+ + G++SE++YPY D TC Y + TG+VD+P E +L A AT+
Sbjct: 185 NAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLP-QREKALMKAVATL 243
Query: 721 GPISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGY---GTEDGSNYWLVKNSWG 891
GPISVAIDA + SFQ YKSGIY +PDCSS LDHGVLVVGY GT+ + +W+VKNSWG
Sbjct: 244 GPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWG 303
Query: 892 TVWGIDG 912
WG +G
Sbjct: 304 PEWGWNG 310
>sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (Cathepsin X) (Cathepsin O2)
Length = 329
Score = 283 bits (725), Expect = 4e-76
Identities = 142/287 (49%), Positives = 187/287 (65%), Gaps = 4/287 (1%)
Frame = +1
Query: 64 LNDDWESYKIKFGKKYES-LNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADM 240
L+ WE +K K+Y + ++EISRRLIWE NLKYI HN+E+ LG HTY L +NH DM
Sbjct: 22 LDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDM 81
Query: 241 TNEEFRAKY--LSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWS 414
T+EE K L VP S + + P+ G+ PD+VD+R +GYVTPVKNQ QCGSCW+
Sbjct: 82 TSEEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWA 141
Query: 415 FSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYIEKF-GIESED 591
FS+ G+LEGQ +KTG L + S Q LVD M NAF+Y++K GI+SED
Sbjct: 142 FSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGY--MTNAFQYVQKNRGIDSED 199
Query: 592 AYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLY 771
AYPY ++ +C+Y+ + C GY +IP G+E +L A A VGP+SVAIDAS SFQ Y
Sbjct: 200 AYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFY 259
Query: 772 KSGIYNEPDCSSTQLDHGVLVVGYGTEDGSNYWLVKNSWGTVWGIDG 912
G+Y + C+S L+H VL VGYG + G+ +W++KNSWG WG G
Sbjct: 260 SKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKG 306
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 283 bits (724), Expect = 5e-76
Identities = 148/291 (50%), Positives = 181/291 (62%), Gaps = 5/291 (1%)
Frame = +1
Query: 55 NSELNDDWESYKIKFGKKYESLNEISRRLIWESNLKYIQKHNIESDLGKHTYTLGLNHFA 234
+ L+ W +K + Y + E RR +WE N+K I+ HN E GKH +T+ +N F
Sbjct: 22 DQNLDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFG 81
Query: 235 DMTNEEFRAKYLSVPPSRKKISTVFMAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWS 414
DMTNEEFR + + VF P + LP +VDWR +GYVTPVKNQ+QCGSCW+
Sbjct: 82 DMTNEEFRQMMGCFRNQKFRKGKVFREPLFLD-LPKSVDWRKKGYVTPVKNQKQCGSCWA 140
Query: 415 FSATGSLEGQHFRKTGNLTSFSEQQLVDXXXXXXXXXXXXXLMDNAFEYI-EKFGIESED 591
FSATG+LEGQ FRKTG L S SEQ LVD M AF+Y+ E G++SE+
Sbjct: 141 FSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEE 200
Query: 592 AYPYTAEDGTCLYDKSKVVGSCTGYVDIPGGSETSLATAAATVGPISVAIDASNYSFQLY 771
+YPY A D C Y V + TG+ + G E +L A ATVGPISVA+DA + SFQ Y
Sbjct: 201 SYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFY 260
Query: 772 KSGIYNEPDCSSTQLDHGVLVVGYGTE----DGSNYWLVKNSWGTVWGIDG 912
KSGIY EPDCSS LDHGVLVVGYG E + S YWLVKNSWG WG +G
Sbjct: 261 KSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNG 311
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.315 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,100,381
Number of Sequences: 369166
Number of extensions: 2109520
Number of successful extensions: 5465
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4952
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9270587090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)