Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_D05
(855 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q16513|PKN2_HUMAN Protein kinase N2 (Protein kinase C-li... 408 e-114
sp|Q8BWW9|PKN2_MOUSE Protein kinase N2 (Protein kinase C-li... 404 e-112
sp|O08874|PKN2_RAT Protein kinase N2 (Protein kinase C-like... 400 e-111
sp|Q16512|PKN1_HUMAN Protein kinase N1 (Protein kinase C-li... 399 e-111
sp|P70268|PKN1_MOUSE Serine/threonine-protein kinase N1 (Pr... 398 e-111
sp|Q63433|PKN1_RAT Protein kinase N1 (Protein kinase C-like... 395 e-109
sp|Q6P5Z2|PKN3_HUMAN Protein kinase N3 (Protein kinase PKN-... 356 4e-98
sp|Q8K045|PKN3_MOUSE Protein kinase N3 (Protein kinase PKN-... 353 4e-97
sp|P36583|PCK2_SCHPO Protein kinase C-like 2 300 3e-81
sp|P87253|KPC1_NEUCR Protein kinase C-like 296 5e-80
>sp|Q16513|PKN2_HUMAN Protein kinase N2 (Protein kinase C-like 2) (Protein-kinase C-related
kinase 2)
Length = 984
Score = 408 bits (1049), Expect = e-114
Identities = 195/280 (69%), Positives = 223/280 (79%)
Frame = +1
Query: 13 NFRCISVLGRGHFGKVLLAQYKNNGXXXXXXXXXXXXXXXRNELETLTSEKRIFQTITES 192
+FRC +VLGRGHFGKVLLA+YKN R+E+++L EKRIF+T+
Sbjct: 656 DFRCCAVLGRGHFGKVLLAEYKNTNEMFAIKALKKGDIVARDEVDSLMCEKRIFETVNSV 715
Query: 193 QHPFLVNLLACFQATEHVLFVMEYARGGDLMMHIQTDVFDENRAVFYSGCIVLGIDFLHS 372
+HPFLVNL ACFQ EHV FVMEYA GGDLMMHI TDVF E RAVFY+ C+VLG+ +LH
Sbjct: 716 RHPFLVNLFACFQTKEHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHE 775
Query: 373 KKIVYRDLKLDNLLLDEQGYVKMADFGLCKENMGHGDRTSTFCGTPEFLAPEVLVERDYT 552
KIVYRDLKLDNLLLD +G+VK+ADFGLCKE MG+GDRTSTFCGTPEFLAPEVL E YT
Sbjct: 776 HKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGYGDRTSTFCGTPEFLAPEVLTETSYT 835
Query: 553 RAVDWWGLGVLIYEMLVGECPFPGDNEEEIFDSIVNHEIRYPRHLSMEATLIMRRLMRRT 732
RAVDWWGLGVLIYEMLVGE PFPGD+EEE+FDSIVN E+RYPR LS EA IMRRL+RR
Sbjct: 836 RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSTEAISIMRRLLRRN 895
Query: 733 PENRLGASARDAEDVKKQPFFRNLVFEDLYAKRIKPVFVP 852
PE RLGAS +DAEDVKK PFFR + + L K++KP F+P
Sbjct: 896 PERRLGASEKDAEDVKKHPFFRLIDWSALMDKKVKPPFIP 935
>sp|Q8BWW9|PKN2_MOUSE Protein kinase N2 (Protein kinase C-like 2) (Protein-kinase C-related
kinase 2)
Length = 983
Score = 404 bits (1038), Expect = e-112
Identities = 194/280 (69%), Positives = 221/280 (78%)
Frame = +1
Query: 13 NFRCISVLGRGHFGKVLLAQYKNNGXXXXXXXXXXXXXXXRNELETLTSEKRIFQTITES 192
+FRC +VLGRGHFGKVLLA+YK+ R+E+++L EKRIF+T+
Sbjct: 655 DFRCCAVLGRGHFGKVLLAEYKHTNEMFAIKALKKGDIVARDEVDSLMCEKRIFETVNSV 714
Query: 193 QHPFLVNLLACFQATEHVLFVMEYARGGDLMMHIQTDVFDENRAVFYSGCIVLGIDFLHS 372
+HPFLVNL ACFQ EHV FVMEYA GGDLMMHI TDVF E RAVFY+ C+VLG+ +LH
Sbjct: 715 RHPFLVNLFACFQTKEHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHE 774
Query: 373 KKIVYRDLKLDNLLLDEQGYVKMADFGLCKENMGHGDRTSTFCGTPEFLAPEVLVERDYT 552
KIVYRDLKLDNLLLD +G+VK+ADFGLCKE MG+GDRTSTFCGTPEFLAPEVL E YT
Sbjct: 775 HKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGYGDRTSTFCGTPEFLAPEVLTETSYT 834
Query: 553 RAVDWWGLGVLIYEMLVGECPFPGDNEEEIFDSIVNHEIRYPRHLSMEATLIMRRLMRRT 732
RAVDWWGLGVLIYEMLVGE PFPGD+EEE+FDSIVN E+RYPR LS EA IMRRL+RR
Sbjct: 835 RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSTEAISIMRRLLRRN 894
Query: 733 PENRLGASARDAEDVKKQPFFRNLVFEDLYAKRIKPVFVP 852
PE RLGA +DAEDVKK PFFR + L K++KP FVP
Sbjct: 895 PERRLGAGEKDAEDVKKHPFFRLTDWSALMDKKVKPPFVP 934
>sp|O08874|PKN2_RAT Protein kinase N2 (Protein kinase C-like 2) (Protein-kinase C-related
kinase 2) (Protease-activated kinase 2) (PAK-2)
Length = 842
Score = 400 bits (1027), Expect = e-111
Identities = 193/280 (68%), Positives = 219/280 (78%)
Frame = +1
Query: 13 NFRCISVLGRGHFGKVLLAQYKNNGXXXXXXXXXXXXXXXRNELETLTSEKRIFQTITES 192
+FRC +VLGRGHFGKVLLA+YK+ R+E+++L EKRIF+T+
Sbjct: 520 DFRCCAVLGRGHFGKVLLAEYKHTNEMFAIKALKKGDIVARDEVDSLMCEKRIFETVNSV 579
Query: 193 QHPFLVNLLACFQATEHVLFVMEYARGGDLMMHIQTDVFDENRAVFYSGCIVLGIDFLHS 372
+HPFLVNL ACFQ EHV FVMEYA GGDLMMHI TDVF E RAVFY+ C+VLG+ +LH
Sbjct: 580 RHPFLVNLFACFQTKEHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHE 639
Query: 373 KKIVYRDLKLDNLLLDEQGYVKMADFGLCKENMGHGDRTSTFCGTPEFLAPEVLVERDYT 552
KIVYRDLKLDNLLLD + VK+ADFGLCKE MG+GDRTSTFCGTPEFLAPEVL E YT
Sbjct: 640 HKIVYRDLKLDNLLLDTEASVKIADFGLCKEGMGYGDRTSTFCGTPEFLAPEVLTETSYT 699
Query: 553 RAVDWWGLGVLIYEMLVGECPFPGDNEEEIFDSIVNHEIRYPRHLSMEATLIMRRLMRRT 732
RAVDWWGLGVLIYEMLVGE PFPGD+EEE+FDSIVN E+RYPR LS EA IMRRL+RR
Sbjct: 700 RAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSTEAISIMRRLLRRN 759
Query: 733 PENRLGASARDAEDVKKQPFFRNLVFEDLYAKRIKPVFVP 852
PE RLGA +DAEDVKK PFFR + L K++KP FVP
Sbjct: 760 PERRLGAGEKDAEDVKKHPFFRLTDWSALLDKKVKPPFVP 799
>sp|Q16512|PKN1_HUMAN Protein kinase N1 (Protein kinase C-like 1) (Protein-kinase C-related
kinase 1) (Protein kinase C-like PKN) (Serine-threonine
protein kinase N) (Protein kinase PKN-alpha)
Length = 942
Score = 399 bits (1025), Expect = e-111
Identities = 191/284 (67%), Positives = 224/284 (78%)
Frame = +1
Query: 1 LDWNNFRCISVLGRGHFGKVLLAQYKNNGXXXXXXXXXXXXXXXRNELETLTSEKRIFQT 180
L +F+ ++VLGRGHFGKVLL++++ +G R+E+E+L EKRI
Sbjct: 610 LTLEDFKFLAVLGRGHFGKVLLSEFRPSGELFAIKALKKGDIVARDEVESLMCEKRILAA 669
Query: 181 ITESQHPFLVNLLACFQATEHVLFVMEYARGGDLMMHIQTDVFDENRAVFYSGCIVLGID 360
+T + HPFLVNL CFQ EHV FVMEY+ GGDLM+HI +DVF E RA+FYS C+VLG+
Sbjct: 670 VTSAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSEPRAIFYSACVVLGLQ 729
Query: 361 FLHSKKIVYRDLKLDNLLLDEQGYVKMADFGLCKENMGHGDRTSTFCGTPEFLAPEVLVE 540
FLH KIVYRDLKLDNLLLD +GYVK+ADFGLCKE MG+GDRTSTFCGTPEFLAPEVL +
Sbjct: 730 FLHEHKIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDRTSTFCGTPEFLAPEVLTD 789
Query: 541 RDYTRAVDWWGLGVLIYEMLVGECPFPGDNEEEIFDSIVNHEIRYPRHLSMEATLIMRRL 720
YTRAVDWWGLGVL+YEMLVGE PFPGD+EEE+FDSIVN E+RYPR LS EA IMRRL
Sbjct: 790 TSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSAEAIGIMRRL 849
Query: 721 MRRTPENRLGASARDAEDVKKQPFFRNLVFEDLYAKRIKPVFVP 852
+RR PE RLG+S RDAEDVKKQPFFR L +E L A+R+ P FVP
Sbjct: 850 LRRNPERRLGSSERDAEDVKKQPFFRTLGWEALLARRLPPPFVP 893
>sp|P70268|PKN1_MOUSE Serine/threonine-protein kinase N1 (Protein kinase C-like 1)
(Protein-kinase C-related kinase 1) (Protein kinase
C-like PKN) (Serine-threonine protein kinase N)
Length = 946
Score = 398 bits (1023), Expect = e-111
Identities = 190/284 (66%), Positives = 226/284 (79%)
Frame = +1
Query: 1 LDWNNFRCISVLGRGHFGKVLLAQYKNNGXXXXXXXXXXXXXXXRNELETLTSEKRIFQT 180
L +F+ ++VLGRGHFGKVLL++++++G R+E+E+L EKRI
Sbjct: 614 LTLEDFKFLAVLGRGHFGKVLLSEFRSSGELFAIKALKKGDIVARDEVESLMCEKRILAA 673
Query: 181 ITESQHPFLVNLLACFQATEHVLFVMEYARGGDLMMHIQTDVFDENRAVFYSGCIVLGID 360
+T + HPFLVNL CFQ EHV FVMEY+ GGDLM+HI +DVF E RAVFYS C+VLG+
Sbjct: 674 VTRAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSEPRAVFYSACVVLGLQ 733
Query: 361 FLHSKKIVYRDLKLDNLLLDEQGYVKMADFGLCKENMGHGDRTSTFCGTPEFLAPEVLVE 540
FLH KIVYRDLKLDNLLLD +GYVK+ADFGLCKE MG+GDRTSTFCGTPEFLAPEVL +
Sbjct: 734 FLHEHKIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDRTSTFCGTPEFLAPEVLTD 793
Query: 541 RDYTRAVDWWGLGVLIYEMLVGECPFPGDNEEEIFDSIVNHEIRYPRHLSMEATLIMRRL 720
YTRAVDWWGLGVL+YEMLVGE PFPGD+EEE+FDSIVN E+RYPR LS EA IMRRL
Sbjct: 794 TSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSAEAIGIMRRL 853
Query: 721 MRRTPENRLGASARDAEDVKKQPFFRNLVFEDLYAKRIKPVFVP 852
+RR PE RLG++ RDAEDVKKQPFFR+L ++ L A+R+ P FVP
Sbjct: 854 LRRNPERRLGSTERDAEDVKKQPFFRSLGWDVLLARRLPPPFVP 897
>sp|Q63433|PKN1_RAT Protein kinase N1 (Protein kinase C-like 1) (Protein-kinase C-related
kinase 1) (Protein kinase C-like PKN) (Serine-threonine
protein kinase N) (Protease-activated kinase 1) (PAK-1)
Length = 946
Score = 395 bits (1014), Expect = e-109
Identities = 189/284 (66%), Positives = 223/284 (78%)
Frame = +1
Query: 1 LDWNNFRCISVLGRGHFGKVLLAQYKNNGXXXXXXXXXXXXXXXRNELETLTSEKRIFQT 180
L +F+ ++VLGRGHFGKVLL+++ ++G R+E+E+L EKRI T
Sbjct: 614 LTLEDFKFLAVLGRGHFGKVLLSEFHSSGELFAIKALKKGDIVARDEVESLMCEKRILAT 673
Query: 181 ITESQHPFLVNLLACFQATEHVLFVMEYARGGDLMMHIQTDVFDENRAVFYSGCIVLGID 360
+T + HPFLVNL CFQ EHV FVMEY+ GGDLM+HI +DVF E RA FYS C+VLG+
Sbjct: 674 VTRAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSEPRAGFYSACVVLGLQ 733
Query: 361 FLHSKKIVYRDLKLDNLLLDEQGYVKMADFGLCKENMGHGDRTSTFCGTPEFLAPEVLVE 540
FLH KIVYRDLKLDNLLLD +GYVK+ADFGLCKE MG+GDRTSTFCGTPEFLAPEVL +
Sbjct: 734 FLHEHKIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDRTSTFCGTPEFLAPEVLTD 793
Query: 541 RDYTRAVDWWGLGVLIYEMLVGECPFPGDNEEEIFDSIVNHEIRYPRHLSMEATLIMRRL 720
YTRAVDWWGLGV +YEMLVGE PFPGD+EEE+FDSIVN E+RYPR LS EA IMRRL
Sbjct: 794 TSYTRAVDWWGLGVFLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSAEAIGIMRRL 853
Query: 721 MRRTPENRLGASARDAEDVKKQPFFRNLVFEDLYAKRIKPVFVP 852
+RR PE RLG++ RDAEDVKKQPFFR L ++ L A+R+ P FVP
Sbjct: 854 LRRNPERRLGSTERDAEDVKKQPFFRTLDWDALLARRLPPPFVP 897
>sp|Q6P5Z2|PKN3_HUMAN Protein kinase N3 (Protein kinase PKN-beta) (Protein-kinase C-related
kinase 3)
Length = 889
Score = 356 bits (914), Expect = 4e-98
Identities = 168/280 (60%), Positives = 209/280 (74%)
Frame = +1
Query: 13 NFRCISVLGRGHFGKVLLAQYKNNGXXXXXXXXXXXXXXXRNELETLTSEKRIFQTITES 192
+FRC++VLGRGHFGKVLL Q+K G R+E+E+L EKRI + + +
Sbjct: 558 DFRCLAVLGRGHFGKVLLVQFKGTGKYYAIKALKKQEVLSRDEIESLYCEKRILEAVGCT 617
Query: 193 QHPFLVNLLACFQATEHVLFVMEYARGGDLMMHIQTDVFDENRAVFYSGCIVLGIDFLHS 372
HPFL++LLACFQ + H FV E+ GGDLMM I DVF E +A FY C+VLG+ FLH
Sbjct: 618 GHPFLLSLLACFQTSSHACFVTEFVPGGDLMMQIHEDVFPEPQARFYVACVVLGLQFLHE 677
Query: 373 KKIVYRDLKLDNLLLDEQGYVKMADFGLCKENMGHGDRTSTFCGTPEFLAPEVLVERDYT 552
KKI+YRDLKLDNLLLD QG++K+ADFGLCKE +G GDRTSTFCGTPEFLAPEVL + YT
Sbjct: 678 KKIIYRDLKLDNLLLDAQGFLKIADFGLCKEGIGFGDRTSTFCGTPEFLAPEVLTQEAYT 737
Query: 553 RAVDWWGLGVLIYEMLVGECPFPGDNEEEIFDSIVNHEIRYPRHLSMEATLIMRRLMRRT 732
RAVDWWGLGVL+YEMLVGECPFPGD EEE+FD IVN + YP LS++ +++L+++
Sbjct: 738 RAVDWWGLGVLLYEMLVGECPFPGDTEEEVFDCIVNMDAPYPGFLSVQGLEFIQKLLQKC 797
Query: 733 PENRLGASARDAEDVKKQPFFRNLVFEDLYAKRIKPVFVP 852
PE RLGA +DAE++K QPFFR ++ L A+ I+P FVP
Sbjct: 798 PEKRLGAGEQDAEEIKVQPFFRTTNWQALLARTIQPPFVP 837
>sp|Q8K045|PKN3_MOUSE Protein kinase N3 (Protein kinase PKN-beta) (Protein-kinase C-related
kinase 3)
Length = 878
Score = 353 bits (905), Expect = 4e-97
Identities = 163/280 (58%), Positives = 210/280 (75%)
Frame = +1
Query: 13 NFRCISVLGRGHFGKVLLAQYKNNGXXXXXXXXXXXXXXXRNELETLTSEKRIFQTITES 192
+FRC++VLGRGHFGKVLL QYK G R+E+++L EKRI +T+ +
Sbjct: 547 DFRCLAVLGRGHFGKVLLVQYKGTGKYYAIKALKKQEVLGRDEIDSLYCEKRILETVGRT 606
Query: 193 QHPFLVNLLACFQATEHVLFVMEYARGGDLMMHIQTDVFDENRAVFYSGCIVLGIDFLHS 372
HPFL++LLAC Q + H FV E+ GGDLM I DVF E +A FY C+VLG+ FLH
Sbjct: 607 GHPFLLSLLACLQTSSHACFVTEFLPGGDLMAQIHEDVFPEPQACFYLACVVLGLQFLHE 666
Query: 373 KKIVYRDLKLDNLLLDEQGYVKMADFGLCKENMGHGDRTSTFCGTPEFLAPEVLVERDYT 552
K+I+YRDLKLDNLLLD QG++K+ADFGLCKE +G GDRTSTFCGTPEFLAPEVL + YT
Sbjct: 667 KRIIYRDLKLDNLLLDAQGFLKIADFGLCKEGIGFGDRTSTFCGTPEFLAPEVLTQEAYT 726
Query: 553 RAVDWWGLGVLIYEMLVGECPFPGDNEEEIFDSIVNHEIRYPRHLSMEATLIMRRLMRRT 732
RAVDWWGLGVL+YEMLVGECPFPGD EEE+F+ IV+ ++ P LS++ ++++L++++
Sbjct: 727 RAVDWWGLGVLLYEMLVGECPFPGDTEEEVFECIVSADVPCPHFLSVQGLELIQKLLQKS 786
Query: 733 PENRLGASARDAEDVKKQPFFRNLVFEDLYAKRIKPVFVP 852
PE RLGA RDAE++K QPFFR ++ L A+ ++P FVP
Sbjct: 787 PEKRLGAGERDAEEIKVQPFFRTTNWQALLARTVQPPFVP 826
>sp|P36583|PCK2_SCHPO Protein kinase C-like 2
Length = 1016
Score = 300 bits (769), Expect = 3e-81
Identities = 136/280 (48%), Positives = 195/280 (69%)
Frame = +1
Query: 13 NFRCISVLGRGHFGKVLLAQYKNNGXXXXXXXXXXXXXXXRNELETLTSEKRIFQTITES 192
+F +SVLG+G+FGKV+LA+ K+ +E+E+ SEKR+F
Sbjct: 682 DFTFLSVLGKGNFGKVMLAELKSEKQLYAIKVLKKEFILENDEVESTKSEKRVFLVANRE 741
Query: 193 QHPFLVNLLACFQATEHVLFVMEYARGGDLMMHIQTDVFDENRAVFYSGCIVLGIDFLHS 372
+HPFLVNL +CFQ + FVM++ GGDLM+HIQ + F RA FY+ + L + + H
Sbjct: 742 RHPFLVNLHSCFQTETRIYFVMDFVSGGDLMLHIQQEQFSRRRAQFYAAEVCLALKYFHD 801
Query: 373 KKIVYRDLKLDNLLLDEQGYVKMADFGLCKENMGHGDRTSTFCGTPEFLAPEVLVERDYT 552
I+YRDLKLDN+LL G+VK+AD+GLCKE+M H + T+TFCGTPEF+APE+L+E+ YT
Sbjct: 802 NGIIYRDLKLDNILLSPDGHVKVADYGLCKEDMWHDNTTATFCGTPEFMAPEILLEQQYT 861
Query: 553 RAVDWWGLGVLIYEMLVGECPFPGDNEEEIFDSIVNHEIRYPRHLSMEATLIMRRLMRRT 732
R+VDWW GVLIY+ML+G+ PF G++EEEIFD+I++ E YP H+ ++ I+++L+ R
Sbjct: 862 RSVDWWAFGVLIYQMLLGQSPFRGEDEEEIFDAILSDEPLYPIHMPRDSVSILQQLLTRD 921
Query: 733 PENRLGASARDAEDVKKQPFFRNLVFEDLYAKRIKPVFVP 852
P+ RLG+ DAEDV PFF N+ ++D+Y KR +P ++P
Sbjct: 922 PKKRLGSGPNDAEDVMTHPFFSNINWDDIYHKRTQPPYIP 961
>sp|P87253|KPC1_NEUCR Protein kinase C-like
Length = 1142
Score = 296 bits (758), Expect = 5e-80
Identities = 133/282 (47%), Positives = 197/282 (69%)
Frame = +1
Query: 10 NNFRCISVLGRGHFGKVLLAQYKNNGXXXXXXXXXXXXXXXRNELETLTSEKRIFQTITE 189
++F ++VLG+G+FGKV+LA+ K + +E+E++ SEKR+F
Sbjct: 815 DHFNFLAVLGKGNFGKVMLAETKKSRKLYAIKVLKKEFIIENDEVESIRSEKRVFLIANR 874
Query: 190 SQHPFLVNLLACFQATEHVLFVMEYARGGDLMMHIQTDVFDENRAVFYSGCIVLGIDFLH 369
+HPFL NL ACFQ V FVMEY GGDLM+HIQ +F RA FY+ + L + + H
Sbjct: 875 ERHPFLTNLHACFQTETRVYFVMEYISGGDLMLHIQRGMFGTKRAQFYAAEVCLALKYFH 934
Query: 370 SKKIVYRDLKLDNLLLDEQGYVKMADFGLCKENMGHGDRTSTFCGTPEFLAPEVLVERDY 549
++YRDLKLDN+LL G++K+AD+GLCKE+M +G TSTFCGTPEF+APE+L+++ Y
Sbjct: 935 ENGVIYRDLKLDNILLTLDGHIKIADYGLCKEDMWYGSTTSTFCGTPEFMAPEILLDKKY 994
Query: 550 TRAVDWWGLGVLIYEMLVGECPFPGDNEEEIFDSIVNHEIRYPRHLSMEATLIMRRLMRR 729
RAVDWW GVLIY+ML+ + PF G++E+EI+D+I+ E YP H+ ++ I+++L+ R
Sbjct: 995 GRAVDWWAFGVLIYQMLLQQSPFRGEDEDEIYDAILADEPLYPIHMPRDSVSILQKLLTR 1054
Query: 730 TPENRLGASARDAEDVKKQPFFRNLVFEDLYAKRIKPVFVPK 855
P+ RLG+ DA+++ QPFFRN+ ++D+Y KR++P F+P+
Sbjct: 1055 EPDQRLGSGPTDAQEIMSQPFFRNINWDDIYHKRVQPPFLPQ 1096
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,791,585
Number of Sequences: 369166
Number of extensions: 2400713
Number of successful extensions: 10211
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7704
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8438301375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)