Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_C17
(779 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35417|MYSP_ECHGR Paramyosin 233 3e-61
sp|Q8T305|MYSP_TAESA Paramyosin 233 3e-61
sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB) 233 3e-61
sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97) 233 4e-61
sp|P06198|MYSP_SCHMA Paramyosin 231 2e-60
sp|O96064|MYSP_MYTGA Paramyosin 184 3e-46
sp|P05661|MYSA_DROME Myosin heavy chain, muscle 135 1e-31
sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, a... 130 3e-30
sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal musc... 130 3e-30
sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle 130 5e-30
>sp|P35417|MYSP_ECHGR Paramyosin
Length = 863
Score = 233 bits (595), Expect = 3e-61
Identities = 117/164 (71%), Positives = 143/164 (87%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
EIEIREITVKLEEAEAFATREGRRMVQKLQ RVRELE++++ E RRAK+ A ARK+ERQ
Sbjct: 700 EIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEAELDGEIRRAKEAFASARKYERQ 759
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEA 360
+KE Q Q++DD+RM+LELQDLL+KTQ+KMK YKRQ+EE EEV+ +TMSKYRKAQQ IEEA
Sbjct: 760 FKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEEA 819
Query: 361 EHRADMVERSMTMRHT-SGPGIRSISVTREVTNTIRGNRSTSIL 489
EHRADM ER++T++ T GPG R++SV RE+ + RGNR+TSI+
Sbjct: 820 EHRADMAERTITIKRTIGGPGSRAVSVVREINSVSRGNRATSIM 863
Score = 38.5 bits (88), Expect = 0.021
Identities = 25/128 (19%), Positives = 56/128 (43%)
Frame = +1
Query: 10 IREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQWKE 189
I E+T + E E + R+ +K +A + ELE ++ + + + ++ +E
Sbjct: 506 IEELTTTISEMEVRFKSDMSRLKKKYEATISELEVQLDVANKANASLNRENKALAQRVQE 565
Query: 190 AQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHR 369
Q +D+RR + L+ ++ K +VEE+ ++ + A+ + +A R
Sbjct: 566 LQTALEDERRAREAAESNLQVSERKRIALTSEVEEIRSQLELSDRARKNAESELNDANGR 625
Query: 370 ADMVERSM 393
+ S+
Sbjct: 626 ISELTMSV 633
>sp|Q8T305|MYSP_TAESA Paramyosin
Length = 863
Score = 233 bits (595), Expect = 3e-61
Identities = 117/164 (71%), Positives = 143/164 (87%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
EIEIREITVKLEEAEAFATREGRRMVQKLQ RVRELE++++ E RRAK+ A ARK+ERQ
Sbjct: 700 EIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEAELDGEIRRAKEAFANARKYERQ 759
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEA 360
+KE Q Q++DD+RM+LELQDLL+KTQ+KMK YKRQ+EE EEV+ +TMSKYRKAQQ IEEA
Sbjct: 760 FKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEEA 819
Query: 361 EHRADMVERSMTMRHT-SGPGIRSISVTREVTNTIRGNRSTSIL 489
EHRADM ER++T++ T GPG R++SV RE+ + RGNR+TSI+
Sbjct: 820 EHRADMAERTITIKRTIGGPGSRAVSVVREINSVSRGNRATSIM 863
Score = 38.5 bits (88), Expect = 0.021
Identities = 24/120 (20%), Positives = 54/120 (45%)
Frame = +1
Query: 10 IREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQWKE 189
I E+T + E E + R+ +K +A + ELE ++ + + + + ++ +E
Sbjct: 506 IEELTTTISEMEVRFKSDMSRLKKKYEATISELEVQLDVANKANANLNRENKTLAQRVQE 565
Query: 190 AQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHR 369
Q +D+RR + L+ ++ K +VEE+ ++ + A+ + +A R
Sbjct: 566 LQAALEDERRAREAAESNLQVSERKRIALASEVEEIRSQLELSDRARKNAESELNDANGR 625
>sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB)
Length = 863
Score = 233 bits (595), Expect = 3e-61
Identities = 117/164 (71%), Positives = 143/164 (87%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
EIEIREITVKLEEAEAFATREGRRMVQKLQ RVRELE++++ E RRAK+ A ARK+ERQ
Sbjct: 700 EIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEAELDGEIRRAKEAFANARKYERQ 759
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEA 360
+KE Q Q++DD+RM+LELQDLL+KTQ+KMK YKRQ+EE EEV+ +TMSKYRKAQQ IEEA
Sbjct: 760 FKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEEA 819
Query: 361 EHRADMVERSMTMRHT-SGPGIRSISVTREVTNTIRGNRSTSIL 489
EHRADM ER++T++ T GPG R++SV RE+ + RGNR+TSI+
Sbjct: 820 EHRADMAERTITIKRTIGGPGSRAVSVVREINSVSRGNRATSIM 863
Score = 38.1 bits (87), Expect = 0.027
Identities = 24/120 (20%), Positives = 54/120 (45%)
Frame = +1
Query: 10 IREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQWKE 189
I E+T + E E + R+ +K +A + ELE ++ + + + + ++ +E
Sbjct: 506 IEELTTTISEMEVRFKSDMSRLKKKYEATISELEVQLDVANKANVNLNRENKTLAQRVQE 565
Query: 190 AQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHR 369
Q +D+RR + L+ ++ K +VEE+ ++ + A+ + +A R
Sbjct: 566 LQAALEDERRAREAAESNLQVSERKRIALASEVEEIRSQLELSDRARKNAESELNDANGR 625
>sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97)
Length = 866
Score = 233 bits (594), Expect = 4e-61
Identities = 122/164 (74%), Positives = 144/164 (87%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELE++ + E+RR KD AQARKFERQ
Sbjct: 704 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELEAEFDGESRRCKDALAQARKFERQ 763
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEA 360
+KE Q QA+DDRRMVLELQDLL+KTQ+KMK YKRQ+EE+EEV+ ITM+KYRKAQQ IEEA
Sbjct: 764 YKELQTQAEDDRRMVLELQDLLDKTQMKMKAYKRQLEEMEEVSQITMNKYRKAQQQIEEA 823
Query: 361 EHRADMVERSMTMRHTSGPGIRSISVTREVTNTI-RGNRSTSIL 489
EHRADM ER++T+R GPG R++SV RE++ T RG R+TS++
Sbjct: 824 EHRADMAERTVTVRRV-GPGGRAVSVARELSVTSNRGMRATSMM 866
Score = 42.4 bits (98), Expect = 0.001
Identities = 27/120 (22%), Positives = 57/120 (47%)
Frame = +1
Query: 10 IREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQWKE 189
I E+TV + E E E R+ ++ ++ + +LE ++A + + + + ++ K+
Sbjct: 510 IEELTVTITEMEVKYKSELSRLKKRYESSIADLEIQLDATNKANANLMKENKNLAQRVKD 569
Query: 190 AQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHR 369
+ DD+RR+ ++ L+ T+ K +VEEL + A+ +EE + R
Sbjct: 570 LETFLDDERRLREAAENNLQITEHKRIQLANEVEELRSAMENLERLRKHAETELEETQSR 629
Score = 32.7 bits (73), Expect = 1.1
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +1
Query: 82 KLQARVRELES--DMEAEAR-RAKDGAAQARKFERQWKEAQQQADDDRRMVLELQDLLEK 252
+L++RVRELE D+E +AR RA+ AA Q ++ D+ + Q+LL++
Sbjct: 26 RLESRVRELEDILDLERDARVRAERHAAD---LSYQVDALSERLDEAGGSTTQTQELLKR 82
Query: 253 TQLKMKTYKRQVEELEEVASITMSKYRKAQQS 348
++++ ++ +E + + R+ Q+
Sbjct: 83 REMEINKLRKDLENANASLELAETSMRRRHQT 114
>sp|P06198|MYSP_SCHMA Paramyosin
Length = 866
Score = 231 bits (589), Expect = 2e-60
Identities = 122/164 (74%), Positives = 143/164 (87%), Gaps = 1/164 (0%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
EIEIREITVKLEEAEA ATREGRRMVQKLQARVRELES+ + E+RR KD AQARKFERQ
Sbjct: 704 EIEIREITVKLEEAEASATREGRRMVQKLQARVRELESEFDGESRRCKDALAQARKFERQ 763
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEA 360
+KE Q QA+DDRRMVLELQDLL+KTQ+KMK YKRQ+EE+EEV+ ITM+KYRKAQQ IEEA
Sbjct: 764 YKELQTQAEDDRRMVLELQDLLDKTQMKMKAYKRQLEEMEEVSQITMNKYRKAQQQIEEA 823
Query: 361 EHRADMVERSMTMRHTSGPGIRSISVTREVTNTI-RGNRSTSIL 489
EHRADM ER++T+R GPG R++SV RE++ T RG R+TS++
Sbjct: 824 EHRADMAERTVTVRRV-GPGGRAVSVARELSVTSNRGMRATSMM 866
Score = 40.8 bits (94), Expect = 0.004
Identities = 24/120 (20%), Positives = 57/120 (47%)
Frame = +1
Query: 10 IREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQWKE 189
I E+TV + E E E R+ ++ ++ + +LE ++ + + + + ++ K+
Sbjct: 510 IEELTVTITEMEVKYKSELSRLKKRYESNIADLEIQLDTANKANANLMKENKNLSQRVKD 569
Query: 190 AQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHR 369
+ D++RR+ ++ L+ T+ K ++EE+ + A+ +EEA+ R
Sbjct: 570 LETFLDEERRLREAAENNLQITEHKRLQLANEIEEIRSTLENLERLRKHAETELEEAQSR 629
Score = 31.6 bits (70), Expect = 2.5
Identities = 23/92 (25%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +1
Query: 82 KLQARVRELES--DMEAEAR-RAKDGAAQARKFERQWKEAQQQADDDRRMVLELQDLLEK 252
+L++RVRELE D+E +AR RA+ AA Q ++ D+ + Q+LL++
Sbjct: 26 RLESRVRELEDLLDLERDARVRAERHAAD---LGFQVDALSERLDEAGGSTTQTQELLKR 82
Query: 253 TQLKMKTYKRQVEELEEVASITMSKYRKAQQS 348
++++ ++ +E + + R+ Q+
Sbjct: 83 REMEINKLRKDLENANASLELAETSMRRRHQT 114
>sp|O96064|MYSP_MYTGA Paramyosin
Length = 864
Score = 184 bits (466), Expect = 3e-46
Identities = 94/156 (60%), Positives = 123/156 (78%), Gaps = 1/156 (0%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
EIEIREITV+LEEAEAFA REG+R + KLQAR+R+LE+++EA+ RR ++ AA ARKFERQ
Sbjct: 713 EIEIREITVRLEEAEAFAQREGKRQIAKLQARIRDLENELEADQRRLREAAASARKFERQ 772
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEA 360
WKE Q +D+DRR V EL + ++ +K KTYKR +EE E+VASITM+KYRKAQ I+EA
Sbjct: 773 WKETVQASDEDRRQVAELTSITDQLTMKCKTYKRMIEEAEDVASITMNKYRKAQSLIDEA 832
Query: 361 EHRADMVERSM-TMRHTSGPGIRSISVTREVTNTIR 465
E RADM E+++ T+R + RS+SV+REVT +R
Sbjct: 833 EQRADMAEKNLQTVRRS-----RSMSVSREVTRVVR 863
Score = 39.7 bits (91), Expect = 0.009
Identities = 37/142 (26%), Positives = 58/142 (40%), Gaps = 14/142 (9%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
E +IRE+ L+ A A E + ++ LQ R RELE +E R+ D Q ER+
Sbjct: 545 ETDIRELEGALDNANR-ANAEYLKQIKSLQNRNRELELQLEEATRQLDDTRNQLSVSERK 603
Query: 181 WKEAQQQADDDRRMVL--------------ELQDLLEKTQLKMKTYKRQVEELEEVASIT 318
QQ+ +D R ++ E+ L + QL++ +E +
Sbjct: 604 RITIQQELEDARSLLEHAERARKNAENELGEVTVRLTEVQLQVTALTNDKRRMEADIAAM 663
Query: 319 MSKYRKAQQSIEEAEHRADMVE 384
S A AE RAD ++
Sbjct: 664 QSDLDDALNGQRAAEERADRLQ 685
Score = 33.5 bits (75), Expect = 0.67
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Frame = +1
Query: 4 IEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQW 183
+EIREIT++LE + +VQ L R R+LE++ A +R D +A+ + +
Sbjct: 348 VEIREITIELENTQI--------IVQDLTKRNRQLENENAALQKRCDDLSAENGQLRNE- 398
Query: 184 KEAQQQADDDRRMVLE----------------LQDLLEKTQLKMKTYKRQVEE------- 294
+A +A+ R V LQ+ L + ++K R + E
Sbjct: 399 -KANLEAECARLKVANAELAEKNANLERENAGLQNALREANNELKAANRTINELTALKAQ 457
Query: 295 LEEVASITMSKYRKAQQSIEEAE 363
LE S R ++++ +AE
Sbjct: 458 LEAERDNLASALRDTEEALRDAE 480
>sp|P05661|MYSA_DROME Myosin heavy chain, muscle
Length = 1962
Score = 135 bits (340), Expect = 1e-31
Identities = 65/138 (47%), Positives = 101/138 (73%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
E +I+E+ V+L+EAEA A + G++ +QKL+ RVRELE++++ E RR D RK ER+
Sbjct: 1786 EQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERR 1845
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEA 360
KE Q+++DR+ +QDL++K Q K+KTYKRQ+EE EE+A++ ++K+RKAQQ +EEA
Sbjct: 1846 VKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKAQQELEEA 1905
Query: 361 EHRADMVERSMTMRHTSG 414
E RAD+ E++++ G
Sbjct: 1906 EERADLAEQAISKFRAKG 1923
Score = 48.9 bits (115), Expect = 2e-05
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +1
Query: 7 EIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQWK 186
E+ IT KLE+ + + +R +++LQAR+ ELE ++EAE + Q R+ +
Sbjct: 1085 ELSSITAKLEDEQVVVLKH-QRQIKELQARIEELEEEVEAERQARAKAEKQRADLARELE 1143
Query: 187 EAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKA-QQSIEEAE 363
E ++ ++ +L +K + ++ +R +EE T++ RK ++ E
Sbjct: 1144 ELGERLEEAGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMA 1203
Query: 364 HRADMVER 387
+ D + +
Sbjct: 1204 EQVDQLNK 1211
Score = 43.5 bits (101), Expect = 6e-04
Identities = 25/115 (21%), Positives = 58/115 (50%)
Frame = +1
Query: 37 EAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQWKEAQQQADDDR 216
EAEA E RM +KL+A + ELE ++ + + +++++Q K+ Q ++++
Sbjct: 1601 EAEAKGKAEALRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKDIQTALEEEQ 1660
Query: 217 RMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHRADMV 381
R + ++ L ++ + + ++EE + R+A+Q + +A + + V
Sbjct: 1661 RARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELADAHEQLNEV 1715
Score = 37.4 bits (85), Expect = 0.046
Identities = 23/135 (17%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Frame = +1
Query: 7 EIREITVKLEEAEAFATREGRR------MVQKLQARVRELESDMEAEARRAKDGAAQARK 168
E+ ++ ++++ A A A ++ ++ + + +V +L ++++A + ++ + + +
Sbjct: 1423 EVEDLQLEVDRANAIANAAEKKQKAFDKIIGEWKLKVDDLAAELDASQKECRNYSTELFR 1482
Query: 169 FERQWKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQS 348
+ ++E Q+Q + RR L D ++ ++ R + E+E+ ++ + Q +
Sbjct: 1483 LKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQAA 1542
Query: 349 IEEAEHRADMVERSM 393
+EEAE + E +
Sbjct: 1543 LEEAEAALEQEENKV 1557
Score = 33.1 bits (74), Expect = 0.87
Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 35/164 (21%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMV----------QKLQARVRE--------------- 105
E E E+ LEEAEA +E +++ Q++ R++E
Sbjct: 1533 EAEKDELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRA 1592
Query: 106 ---LESDMEAEARRAKDGAAQARKFERQWKEAQQQADDDRRMVLELQDLLEKTQLKMKTY 276
+++ +EAEA+ + +K E E + D + E Q +++ Q ++K
Sbjct: 1593 LDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKDI 1652
Query: 277 KRQVEE-------LEEVASITMSKYRKAQQSIEEAEHRADMVER 387
+ +EE E I+ + Q +EE+ + +R
Sbjct: 1653 QTALEEEQRARDDAREQLGISERRANALQNELEESRTLLEQADR 1696
Score = 32.3 bits (72), Expect = 1.5
Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 21/143 (14%)
Frame = +1
Query: 82 KLQARVRELESDMEAEARRAKDGAAQARKFERQWKEAQQQADDDRRMVLELQDLLE---- 249
KL+ + ELE +E E + D RK E K Q+ D R EL+ ++
Sbjct: 1025 KLEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDK 1084
Query: 250 -----------------KTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHRADM 378
K Q ++K + ++EELEE + + +A+ + A+ ++
Sbjct: 1085 ELSSITAKLEDEQVVVLKHQRQIKELQARIEELEE--EVEAERQARAKAEKQRADLAREL 1142
Query: 379 VERSMTMRHTSGPGIRSISVTRE 447
E + G I + ++
Sbjct: 1143 EELGERLEEAGGATSAQIELNKK 1165
Score = 32.3 bits (72), Expect = 1.5
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 14/138 (10%)
Frame = +1
Query: 34 EEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQWKEAQQQADDD 213
+EA A R + + Q +Q + +EL S + +D K +RQ KE Q + ++
Sbjct: 1062 QEAVADLERNKKELEQTIQRKDKELSSI----TAKLEDEQVVVLKHQRQIKELQARIEEL 1117
Query: 214 RRMVLELQDLLEKTQLKMKTYKRQVEELEE---------VASITMSKYRKAQQS-----I 351
V + K + + R++EEL E A I ++K R+A+ S +
Sbjct: 1118 EEEVEAERQARAKAEKQRADLARELEELGERLEEAGGATSAQIELNKKREAELSKLRRDL 1177
Query: 352 EEAEHRADMVERSMTMRH 405
EEA + + ++ +H
Sbjct: 1178 EEANIQHESTLANLRKKH 1195
>sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, adult
Length = 1939
Score = 130 bits (328), Expect = 3e-30
Identities = 60/146 (41%), Positives = 99/146 (67%)
Frame = +1
Query: 10 IREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQWKE 189
++++ V+L+EAE A + G++ +QKL+ARVRELE ++++E +R+ + RK+ER+ KE
Sbjct: 1793 VKDLHVRLDEAEQLALKGGKKQLQKLEARVRELEGEVDSEQKRSAEAVKGVRKYERRVKE 1852
Query: 190 AQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHR 369
Q ++DR+ +L LQDL++K Q+K+K+YKRQ EE EE++++ +SK+RK Q +EEAE R
Sbjct: 1853 LTYQCEEDRKNILRLQDLVDKLQMKVKSYKRQAEEAEELSNVNLSKFRKIQHELEEAEER 1912
Query: 370 ADMVERSMTMRHTSGPGIRSISVTRE 447
AD+ E + I + E
Sbjct: 1913 ADIAESQVNKLRVKSREIHGKKIEEE 1938
Score = 42.4 bits (98), Expect = 0.001
Identities = 29/130 (22%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
+ EI +I K+E+ +A + ++ +++LQAR+ ELE ++EAE R+
Sbjct: 1087 DFEISQIQSKIEDEQALGMQLQKK-IKELQARIEELEEEIEAERTSRAKAEKHRADLSRE 1145
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQ-QSIEE 357
+E ++ ++ ++ +K + + + +R +EE T + RK S E
Sbjct: 1146 LEEISERLEEAGGATAAQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADSTAE 1205
Query: 358 AEHRADMVER 387
+ D ++R
Sbjct: 1206 LGEQIDNLQR 1215
Score = 39.7 bits (91), Expect = 0.009
Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +1
Query: 82 KLQARVRELESDMEAEARRAKDGAAQARKFERQWKEAQQQADDDRRMVLELQDLLEKTQL 261
+L+ + +L S+ME+ ++ + R E Q E + + + ++RM+ +L + Q
Sbjct: 1226 ELKMEIDDLASNMESVSKAKANLEKMCRTLEDQLSEIKTKEEQNQRMINDLNTQRARLQT 1285
Query: 262 KMKTYKRQVEELEE-VASITMSKYRKAQQSIEEAEHRADMVERSMTMRHTSGPGIRSISV 438
+ Y RQ EE + ++ ++ K QQ E H + ++ + H +
Sbjct: 1286 ETGEYSRQAEEKDALISQLSRGKQGFTQQIEELKRHLEEEIKAKNALAHALQSARHDCEL 1345
Query: 439 TRE 447
RE
Sbjct: 1346 LRE 1348
Score = 37.7 bits (86), Expect = 0.035
Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 7/133 (5%)
Frame = +1
Query: 13 REITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQWKEA 192
R+I K EE + R R+V+ +Q S ++AE R + +K E E
Sbjct: 1577 RKIAEKDEEIDQLK-RNHLRIVESMQ-------STLDAEIRSRNEALRLKKKMEGDLNEM 1628
Query: 193 QQQADDDRRMVLELQDLLEKTQLKMKTYK-------RQVEELEEVASITMSKYRKAQQSI 351
+ Q RM E Q L TQ +K + R E+L+E ++ + Q +
Sbjct: 1629 EIQLSHANRMAAEAQKNLRNTQGTLKDTQIHLDDALRTQEDLKEQVAMVERRANLLQAEV 1688
Query: 352 EEAEHRADMVERS 390
EE + ERS
Sbjct: 1689 EELRGALEQTERS 1701
Score = 33.9 bits (76), Expect = 0.51
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 21/120 (17%)
Frame = +1
Query: 82 KLQARVRELESDMEAEARRAKDGAAQARKFERQWKEA----------QQQADDDRRM--- 222
KL+ +V +LE +E E + D RK E K A +QQ D+ +
Sbjct: 1029 KLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAHDSIMDLENDKQQLDEKLKKKDF 1088
Query: 223 -VLELQDLLE-------KTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHRADM 378
+ ++Q +E + Q K+K + ++EELEE + KA+ +HRAD+
Sbjct: 1089 EISQIQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERTSRAKAE------KHRADL 1142
Score = 33.5 bits (75), Expect = 0.67
Identities = 26/125 (20%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQA----RVRELESDMEAEARRAKDGAAQARK 168
E+E + V+ A A + ++ K+ A + E ++++EA + ++ + + K
Sbjct: 1427 EVEDLMVDVERSNAACAALDKKQKNFDKILAEWKQKYEETQTELEASQKESRSLSTELFK 1486
Query: 169 FERQWKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQS 348
+ ++E+ + +R LQ + ++ + V ELE+V + + Q S
Sbjct: 1487 MKNAYEESLDHLETLKRENKNLQQEIADLTEQIAEGGKAVHELEKVKKHVEQEKSELQAS 1546
Query: 349 IEEAE 363
+EEAE
Sbjct: 1547 LEEAE 1551
>sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal muscle, embryonic
Length = 1940
Score = 130 bits (328), Expect = 3e-30
Identities = 59/125 (47%), Positives = 95/125 (76%)
Frame = +1
Query: 10 IREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQWKE 189
++++ +L+EAE A + G++ +QKL+ARVRELE +++AE +R+ + RK+ER+ KE
Sbjct: 1795 VKDLQHRLDEAEQLALKGGKKQIQKLEARVRELEGEVDAEQKRSAEAVKGVRKYERRVKE 1854
Query: 190 AQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHR 369
Q+++DR+ VL LQDL++K Q+K+K+YKRQ EE EE++++ +SK+RK Q +EEAE R
Sbjct: 1855 LTYQSEEDRKNVLRLQDLVDKLQMKVKSYKRQAEEAEELSNVNLSKFRKIQHELEEAEER 1914
Query: 370 ADMVE 384
AD+ E
Sbjct: 1915 ADIAE 1919
Score = 43.9 bits (102), Expect = 5e-04
Identities = 30/129 (23%), Positives = 62/129 (48%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
+ EI +I K+E+ +A + ++ +++LQAR+ ELE ++EAE R+
Sbjct: 1089 DFEISQIQSKIEDEQALGMQLQKK-IKELQARIEELEEEIEAERTSRAKAEKHRADLSRE 1147
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEA 360
+E ++ ++ D+ +K + + + +R +EE T + RK + A
Sbjct: 1148 LEEISERLEEAGGATAAQIDMNKKREAEFQKMRRDLEEATLQHEATAAALRK-----KHA 1202
Query: 361 EHRADMVER 387
+ AD+ E+
Sbjct: 1203 DSTADVGEQ 1211
Score = 40.0 bits (92), Expect = 0.007
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Frame = +1
Query: 13 REITVKLEEAEAFATREGRRMVQKLQARV-RELESDMEAEARRAKDGAAQARKFERQWKE 189
R+I K EE + R R+V +Q+ + E+ S EA R K + E Q
Sbjct: 1579 RKIAEKDEEIDQLK-RNHLRVVDSMQSTLDAEIRSRNEA-LRLKKKMEGDLNEIEIQLSH 1636
Query: 190 AQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHR 369
A +QA + ++ + Q +L+ TQ+ + R E+L+E ++ + Q IEE
Sbjct: 1637 ANRQAAEAQKNLRNTQGVLKDTQIHLDDALRSQEDLKEQVAMVERRANLLQAEIEELRAA 1696
Query: 370 ADMVERS 390
+ ERS
Sbjct: 1697 LEQTERS 1703
Score = 37.4 bits (85), Expect = 0.046
Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Frame = +1
Query: 82 KLQARVRELESDMEAEARRAKDGAAQARKFERQWKEAQQQADDDRRMVLELQDLLEKTQL 261
+L+ + +L S+ME+ ++ + R E Q E + + ++ +R + ++ + Q
Sbjct: 1228 ELKMEIDDLASNMESVSKAKANLEKMCRSLEDQLSEIKTKEEEQQRTINDISAQKARLQT 1287
Query: 262 KMKTYKRQVEELEE-VASITMSKYRKAQQSIEEAEHRADMVERSMTMRHTSGPGIRSISV 438
+ Y RQVEE + ++ ++ K QQ E H + ++ H +
Sbjct: 1288 ESGEYSRQVEEKDALISQLSRGKQAFTQQIEELKRHLEEEIKAKKCPAHALQSARHDCDL 1347
Query: 439 TRE 447
RE
Sbjct: 1348 LRE 1350
Score = 34.7 bits (78), Expect = 0.30
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 21/120 (17%)
Frame = +1
Query: 82 KLQARVRELESDMEAEARRAKDGAAQARKFERQWKEAQQQADDDRRMVLELQDLLEKT-- 255
KL+ +V +LE +E E + D RK E K Q+ D +L + L+K
Sbjct: 1031 KLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKMTQESTMDLENDKQQLDEKLKKKDF 1090
Query: 256 -------------------QLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHRADM 378
Q K+K + ++EELEE + KA+ +HRAD+
Sbjct: 1091 EISQIQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERTSRAKAE------KHRADL 1144
Score = 31.6 bits (70), Expect = 2.5
Identities = 20/125 (16%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Frame = +1
Query: 7 EIREITVKLEEAEAFATREGRR------MVQKLQARVRELESDMEAEARRAKDGAAQARK 168
E+ ++ + +E + A ++ ++ + + + E ++++EA + ++ + + K
Sbjct: 1429 EVEDLMIDVERSNAACAALDKKQKNFDKILSEWKQKYEETQAELEASQKESRSLSTELFK 1488
Query: 169 FERQWKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQS 348
+ ++E+ + +R LQ + ++ + + ELE+V + + Q +
Sbjct: 1489 MKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKAIHELEKVKKQIEQEKSELQTA 1548
Query: 349 IEEAE 363
+EEAE
Sbjct: 1549 LEEAE 1553
>sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle
Length = 1935
Score = 130 bits (326), Expect = 5e-30
Identities = 60/128 (46%), Positives = 93/128 (72%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
E+ ++++ +L+EAE+ A + G++ +QKL++RVRELE+++EAE RR D RK+ER+
Sbjct: 1788 EVTVKDLQHRLDEAESLAMKGGKKQLQKLESRVRELEAEVEAEQRRGADAVKGVRKYERR 1847
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEA 360
KE Q ++D++ V+ LQDL++K QLK+K YKRQ EE EE + +S+YRK Q +EEA
Sbjct: 1848 VKELTYQTEEDKKNVIRLQDLVDKLQLKVKVYKRQAEEAEEQTNTHLSRYRKVQHELEEA 1907
Query: 361 EHRADMVE 384
+ RAD+ E
Sbjct: 1908 QERADVAE 1915
Score = 44.7 bits (104), Expect = 3e-04
Identities = 29/130 (22%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
+ EI ++ K+E+ ++ + ++ +++LQAR+ ELE ++EAE Q R+
Sbjct: 1085 DFEISQLLSKIEDEQSLGAQLQKK-IKELQARIEELEEEIEAERAARAKVEKQRADLSRE 1143
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQ-QSIEE 357
+E ++ ++ ++ +K + + + +R +EE T + RK Q S+ E
Sbjct: 1144 LEEISERLEEAGGATAAQIEMNKKREAEFQKMRRDLEESTLQHEATAAALRKEQADSVAE 1203
Query: 358 AEHRADMVER 387
+ D ++R
Sbjct: 1204 LGEQIDNLQR 1213
Score = 37.0 bits (84), Expect = 0.061
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Frame = +1
Query: 82 KLQARVRELESDMEAEARRAKDGAAQARKFERQWKEAQ----------QQADDD-RRMVL 228
KL+ +V +LE +E E + D RK E K AQ QQ+D+ ++
Sbjct: 1027 KLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDLENEKQQSDEKIKKKDF 1086
Query: 229 ELQDLLEKT----------QLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEAEHRADM 378
E+ LL K Q K+K + ++EELEE I + +A+ + A+ ++
Sbjct: 1087 EISQLLSKIEDEQSLGAQLQKKIKELQARIEELEE--EIEAERAARAKVEKQRADLSREL 1144
Query: 379 VERSMTMRHTSGPGIRSISVTRE 447
E S + G I + ++
Sbjct: 1145 EEISERLEEAGGATAAQIEMNKK 1167
Score = 37.0 bits (84), Expect = 0.061
Identities = 28/127 (22%), Positives = 62/127 (48%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
++EI ++T +E A A A +M + L+ ++ E+++ + R+ D AQ + + +
Sbjct: 1226 KMEIDDLTSNME-AVAKAKANLEKMCRTLEDQLSEIKTKSDENVRQLNDMNAQRARLQTE 1284
Query: 181 WKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQSIEEA 360
E +Q ++ +V +L T+ K + Y +Q+EEL+ + +++ A
Sbjct: 1285 NGEFSRQLEEKEALVSQL------TRGK-QAYTQQIEELKRHIEEEVKAKNALAHAVQSA 1337
Query: 361 EHRADMV 381
H D++
Sbjct: 1338 RHDCDLL 1344
Score = 37.0 bits (84), Expect = 0.061
Identities = 23/125 (18%), Positives = 58/125 (46%), Gaps = 6/125 (4%)
Frame = +1
Query: 7 EIREITVKLEEAEAFAT------REGRRMVQKLQARVRELESDMEAEARRAKDGAAQARK 168
E+ ++ + +E A + A R +++ + + + E ++++E + A+ + + K
Sbjct: 1425 EVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYEESQAELEGAQKEARSLSTELFK 1484
Query: 169 FERQWKEAQQQADDDRRMVLELQDLLEKTQLKMKTYKRQVEELEEVASITMSKYRKAQQS 348
+ ++EA + +R LQ + ++ + + ELE+ S+ + Q +
Sbjct: 1485 MKNSYEEALDHLETLKRENKNLQQEISDLTEQLGETGKSIHELEKAKKTVESEKSEIQTA 1544
Query: 349 IEEAE 363
+EEAE
Sbjct: 1545 LEEAE 1549
Score = 36.6 bits (83), Expect = 0.079
Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 9/166 (5%)
Frame = +1
Query: 1 EIEIREITVKLEEAEAFATREGRRMVQKLQARVRELESDMEAEARRAKDGAAQARKFERQ 180
+ E E + +LEE EA ++ R Q ++ EL+ +E E + AK+ A A + R
Sbjct: 1282 QTENGEFSRQLEEKEALVSQLTRGK-QAYTQQIEELKRHIEEEVK-AKNALAHAVQSARH 1339
Query: 181 WKEA-QQQADDDRRMVLELQDLLEKTQLKMKTYK--------RQVEELEEVASITMSKYR 333
+ ++Q ++++ ELQ + K ++ ++ ++ EELEE + +
Sbjct: 1340 DCDLLREQYEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQ 1399
Query: 334 KAQQSIEEAEHRADMVERSMTMRHTSGPGIRSISVTREVTNTIRGN 471
A++SIE + +E+ T + G + + + E N++ N
Sbjct: 1400 DAEESIEAVNSKCASLEK--TKQRLQGE-VEDLMIDVERANSLAAN 1442
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,213,977
Number of Sequences: 369166
Number of extensions: 1162726
Number of successful extensions: 5623
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5503
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7308943600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)