Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_011_B23
(839 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 413 e-115
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 412 e-115
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 412 e-115
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 410 e-114
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 407 e-113
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 398 e-111
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 393 e-109
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 390 e-108
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 390 e-108
sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP... 373 e-103
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 413 bits (1062), Expect = e-115
Identities = 202/279 (72%), Positives = 229/279 (82%)
Frame = +2
Query: 2 RVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPF 181
R+ESKT I T+ +R T+P Q LG WMSE D E A N RFPGCMKGRTMYVIPF
Sbjct: 87 RIESKTVIVTQEQRDTVPIPKTGLSQ--LGRWMSEEDFEKAFNARFPGCMKGRTMYVIPF 144
Query: 182 SMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTE 361
SMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP +
Sbjct: 145 SMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGCPLPLQ 203
Query: 362 RHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAE 541
+ ++N WPCNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AE
Sbjct: 204 KPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAE 263
Query: 542 HMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSL 721
HMLILG+T P GEK Y+ AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G L
Sbjct: 264 HMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHL 323
Query: 722 RAINPEAGFFGVAPGTSHSTNPNAMKCIQRNTIFTNVAE 838
RAINPE GFFGVAPGTS TNPNA+K IQ+NTIFTNVAE
Sbjct: 324 RAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAE 362
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 412 bits (1059), Expect = e-115
Identities = 202/279 (72%), Positives = 229/279 (82%)
Frame = +2
Query: 2 RVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPF 181
R+ SKT I T+ +R T+P Q LG WMSE D E ALN RFPGCMKGRTMYVIPF
Sbjct: 87 RIGSKTVIVTQEQRDTVPIPKTGLSQ--LGRWMSEEDFEKALNARFPGCMKGRTMYVIPF 144
Query: 182 SMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTE 361
SMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP +
Sbjct: 145 SMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGCPLPLQ 203
Query: 362 RHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAE 541
+ ++N WPCNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AE
Sbjct: 204 KPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAE 263
Query: 542 HMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSL 721
HMLILG+T P GEK Y+ AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G L
Sbjct: 264 HMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHL 323
Query: 722 RAINPEAGFFGVAPGTSHSTNPNAMKCIQRNTIFTNVAE 838
RAINPE GFFGVAPGTS TNPNA+K IQ+NTIFTNVAE
Sbjct: 324 RAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAE 362
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 412 bits (1058), Expect = e-115
Identities = 199/279 (71%), Positives = 230/279 (82%)
Frame = +2
Query: 2 RVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPF 181
R+ESKT I T+ +R T+P Q +LG WMSE D E A N RFPGCMKGRTMYVIPF
Sbjct: 87 RIESKTVIITQEQRDTVPIPKSG--QSQLGRWMSEEDFEKAFNARFPGCMKGRTMYVIPF 144
Query: 182 SMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTE 361
SMGP+G PL+KIGIELTDSPYVV SM+IMTRMG VLE++ D F+K LHSVG PLP +
Sbjct: 145 SMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGTSVLEALGDGE-FIKCLHSVGCPLPLK 203
Query: 362 RHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAE 541
+ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AE
Sbjct: 204 KPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEEGWLAE 263
Query: 542 HMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSL 721
HMLILG+T P G+K Y+ AAFPSACGKTNLAM+ PT+PG+KVECVGDDIAWMKFD++G+L
Sbjct: 264 HMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMKFDAQGNL 323
Query: 722 RAINPEAGFFGVAPGTSHSTNPNAMKCIQRNTIFTNVAE 838
RAINPE GFFGVAPGTS TNPNA+K IQ+NTIFTNVAE
Sbjct: 324 RAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAE 362
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 410 bits (1054), Expect = e-114
Identities = 201/279 (72%), Positives = 228/279 (81%)
Frame = +2
Query: 2 RVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPF 181
R+ESKT I T+ +R T+P + Q LG WMSE D E A N RFPGCMKGRTMYVIPF
Sbjct: 87 RIESKTVIITREQRDTVPIPKNGLSQ--LGRWMSEEDFEKAFNIRFPGCMKGRTMYVIPF 144
Query: 182 SMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTE 361
SMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP +
Sbjct: 145 SMGPLGSPLSKIGIELTDSPYVVTSMRIMTRMGTSVLEALGDGE-FVKCLHSVGCPLPLK 203
Query: 362 RHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAE 541
+ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AE
Sbjct: 204 KPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAE 263
Query: 542 HMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSL 721
HMLILG+T P G+K Y AAFPSACGKTNLAM+ PT+PG+KVECVGDDIAWMKFD +G+L
Sbjct: 264 HMLILGITNPKGQKKYFAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMKFDQQGNL 323
Query: 722 RAINPEAGFFGVAPGTSHSTNPNAMKCIQRNTIFTNVAE 838
RAINPE GFFGVAPGTS TNPNA+K IQ+NTIFTNVAE
Sbjct: 324 RAINPENGFFGVAPGTSVRTNPNAIKTIQKNTIFTNVAE 362
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 407 bits (1047), Expect = e-113
Identities = 198/279 (70%), Positives = 229/279 (82%)
Frame = +2
Query: 2 RVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPF 181
R+ESKT I T+ +R T+P Q LG WMSE D E A N RFPGCMKGRTMYVIPF
Sbjct: 87 RIESKTVIITQEQRDTVPIPKTGLSQ--LGRWMSEEDFEKAFNARFPGCMKGRTMYVIPF 144
Query: 182 SMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTE 361
SMGP+G PL+KIGIELTDSPYVV SM+IMTRMG VLE++ D F+K LHSVG PLP +
Sbjct: 145 SMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGISVLEALGDGE-FIKCLHSVGCPLPLK 203
Query: 362 RHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAE 541
+ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AE
Sbjct: 204 KPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEEGWLAE 263
Query: 542 HMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSL 721
HMLILG+T P G+K Y+ AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G+L
Sbjct: 264 HMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGNL 323
Query: 722 RAINPEAGFFGVAPGTSHSTNPNAMKCIQRNTIFTNVAE 838
RAINPE GFFGVAPGTS TNPNA+K IQ+NTIFTNVAE
Sbjct: 324 RAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAE 362
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 398 bits (1023), Expect = e-111
Identities = 196/279 (70%), Positives = 223/279 (79%)
Frame = +2
Query: 2 RVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPF 181
R+ESKT I T+ +R TIP Q LG WMSE D E A N RFPGCM+GRTMYVIPF
Sbjct: 87 RIESKTVIITQEQRDTIPIPKTGSSQ--LGRWMSEEDFEKAFNTRFPGCMQGRTMYVIPF 144
Query: 182 SMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTE 361
SMGPIG PL+KIGIELTDSPYVV SM++MTRMG L+++ + FVK LHSVG PLP +
Sbjct: 145 SMGPIGSPLAKIGIELTDSPYVVASMRMMTRMGTAALKALGNGE-FVKCLHSVGCPLPLK 203
Query: 362 RHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAE 541
+IN WPCNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S +A++E W AE
Sbjct: 204 EPLINNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRIAKEEGWLAE 263
Query: 542 HMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSL 721
HMLILG+T P GEK Y AAFPSACGKTNLAM+ P+ PG+K+ECVGDDIAWMKFD G+L
Sbjct: 264 HMLILGITNPEGEKKYFAAAFPSACGKTNLAMMNPSRPGWKIECVGDDIAWMKFDELGNL 323
Query: 722 RAINPEAGFFGVAPGTSHSTNPNAMKCIQRNTIFTNVAE 838
RAINPE GFFGVAPGTS TNPNA+K I +NTIFTNVAE
Sbjct: 324 RAINPENGFFGVAPGTSIKTNPNAIKTIFKNTIFTNVAE 362
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 393 bits (1009), Expect = e-109
Identities = 191/279 (68%), Positives = 225/279 (80%)
Frame = +2
Query: 2 RVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPF 181
RVESKT I T +R T+P +G+LGNWMS +D + A+++RFPGCM+GRTMYV+PF
Sbjct: 104 RVESKTVIVTPSQRDTVP-LPPGGARGQLGNWMSPADFQRAVDERFPGCMQGRTMYVLPF 162
Query: 182 SMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTE 361
SMGP+G PLS+IG++LTDS YVV SM+IMTR+G VL+++ D FVK LHSVG PL +
Sbjct: 163 SMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FVKCLHSVGQPLTGQ 221
Query: 362 RHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAE 541
++ WPCNPEKTLI H+P + EI SFGSGYGGNSLLGKKCFALR+ S LARDE W AE
Sbjct: 222 GEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLGKKCFALRIASRLARDEGWLAE 281
Query: 542 HMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSL 721
HMLILG+T P G+K AAFPSACGKTNLAM+ P +PG+KVECVGDDIAWM+FDS+G L
Sbjct: 282 HMLILGITSPAGKKALCAAAFPSACGKTNLAMMRPALPGWKVECVGDDIAWMRFDSEGRL 341
Query: 722 RAINPEAGFFGVAPGTSHSTNPNAMKCIQRNTIFTNVAE 838
RAINPE GFFGVAPGTS +TNPNAM IQ NTIFTNVAE
Sbjct: 342 RAINPENGFFGVAPGTSATTNPNAMATIQSNTIFTNVAE 380
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 390 bits (1002), Expect = e-108
Identities = 188/279 (67%), Positives = 224/279 (80%)
Frame = +2
Query: 2 RVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPF 181
RVESKT I T +R T+P + +G+LGNWMS + + A+++RFPGCM+GR MYV+PF
Sbjct: 104 RVESKTVIVTPSQRDTVPLLAGGA-RGQLGNWMSPDEFQRAVDERFPGCMQGRIMYVLPF 162
Query: 182 SMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTE 361
SMGP+G PLS+IG++LTDS YVV SM+IMTR+G VL+++ D F+K LHSVG PL
Sbjct: 163 SMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FIKCLHSVGQPLTGH 221
Query: 362 RHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAE 541
+ WPCNPEKTLI H+P + EI SFGSGYGGNSLLGKKCFALR+ S LARDE W AE
Sbjct: 222 GDPVGQWPCNPEKTLIGHVPDQREIVSFGSGYGGNSLLGKKCFALRIASRLARDEGWLAE 281
Query: 542 HMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSL 721
HMLILG+T P G+K Y+ AAFPSACGKTNLAM+ P +PG+KVECVGDDIAWM+FDS+G L
Sbjct: 282 HMLILGITNPAGKKRYVAAAFPSACGKTNLAMMRPALPGWKVECVGDDIAWMRFDSEGQL 341
Query: 722 RAINPEAGFFGVAPGTSHSTNPNAMKCIQRNTIFTNVAE 838
RAINPE GFFGVAPGTS +TNPNAM IQ NT+FTNVAE
Sbjct: 342 RAINPENGFFGVAPGTSAATNPNAMATIQSNTLFTNVAE 380
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 390 bits (1002), Expect = e-108
Identities = 192/278 (69%), Positives = 222/278 (79%)
Frame = +2
Query: 2 RVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPF 181
RVES+TFI T+ + TIP T ++G LGNW+S SDM+AA+ RFPGCMKGRTMYV+PF
Sbjct: 112 RVESRTFICTERREETIP-TPVEGVKGTLGNWISPSDMDAAVQQRFPGCMKGRTMYVVPF 170
Query: 182 SMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTE 361
SMGP+G PLSKIGIELTDS YVV SM+IMTRMG VL + FV+ALHSVG P +
Sbjct: 171 SMGPVGSPLSKIGIELTDSAYVVASMRIMTRMGAAVLRQLAKKEEFVRALHSVGAPANGQ 230
Query: 362 RHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAE 541
+ WPC+PE+T+I H PA+N I S+GSGYGGNSLLGKKCFALR+GS +A+ E W AE
Sbjct: 231 VEQPS-WPCDPERTIILHKPAENLIVSYGSGYGGNSLLGKKCFALRIGSTIAKQEGWLAE 289
Query: 542 HMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSL 721
HMLILG+T P GEK YITAAFPSACGKTNLAM+ P++ YKVECVGDDIAWMKFDS+G L
Sbjct: 290 HMLILGITDPKGEKKYITAAFPSACGKTNLAMLNPSLANYKVECVGDDIAWMKFDSQGVL 349
Query: 722 RAINPEAGFFGVAPGTSHSTNPNAMKCIQRNTIFTNVA 835
RAINPE GFFGVAPGTS TNP AM + +NTIFTNVA
Sbjct: 350 RAINPENGFFGVAPGTSMETNPIAMNTVFKNTIFTNVA 387
>sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 643
Score = 373 bits (958), Expect = e-103
Identities = 182/280 (65%), Positives = 215/280 (76%), Gaps = 1/280 (0%)
Frame = +2
Query: 2 RVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPF 181
RVESKT++ T K ++ T + ++ +G WMS + L+DRFPGCM GRTMYVIP+
Sbjct: 102 RVESKTWMITPEKYDSVCHTPEG-VKPMMGQWMSPDEFGKELDDRFPGCMAGRTMYVIPY 160
Query: 182 SMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDST-PFVKALHSVGVPLPT 358
SMGP+GGPLSKIGIELTDS YVV M+IMTRMG VL+++ + FV+ +HSVG P P
Sbjct: 161 SMGPVGGPLSKIGIELTDSDYVVLCMRIMTRMGEPVLKALAKNNGEFVRCVHSVGQPKPV 220
Query: 359 ERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFA 538
+IN WPCNPEKT+IAH PA+ EI SFGSGYGGNSLLGKKCFALR+ + DE W A
Sbjct: 221 ATKVINHWPCNPEKTIIAHRPAEREIWSFGSGYGGNSLLGKKCFALRIAMNIGYDEGWMA 280
Query: 539 EHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGS 718
EHMLI+G+T P GE+ ++ AAFPSACGKTNLAM+EPTIPG+KV +GDDIAWMKF + G
Sbjct: 281 EHMLIMGVTSPKGEERFVAAAFPSACGKTNLAMLEPTIPGWKVRVIGDDIAWMKFGADGR 340
Query: 719 LRAINPEAGFFGVAPGTSHSTNPNAMKCIQRNTIFTNVAE 838
L AINPE GFFGVAPGTSH TNP AM Q NTIFTNVAE
Sbjct: 341 LYAINPEYGFFGVAPGTSHKTNPMAMASFQENTIFTNVAE 380
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,945,027
Number of Sequences: 369166
Number of extensions: 2505222
Number of successful extensions: 6415
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6320
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8197207050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)