Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_P18
(864 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 528 e-149
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 528 e-149
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 527 e-149
sp|P10984|ACT2_CAEEL Actin-2 526 e-149
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 526 e-149
sp|P15475|ACTB_XENBO Actin, cytoplasmic 1 (Beta actin) 526 e-149
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 526 e-149
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 526 e-149
sp|P30163|ACT2_ONCVO Actin-2 526 e-149
sp|P30162|ACT1_ONCVO Actin-1 526 e-149
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 528 bits (1359), Expect = e-149
Identities = 258/267 (96%), Positives = 263/267 (98%)
Frame = +2
Query: 26 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 205
M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 206 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 385
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 386 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 565
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLD 180
Query: 566 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKS 745
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKS 240
Query: 746 YELPDGQVITIGNERFRCPEALFQPSF 826
YELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 241 YELPDGQVITIGNERFRCPEAMFQPSF 267
Score = 30.8 bits (68), Expect = 5.1
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 811 FPTKFLGLESVGIHETTY 864
F FLG+E+ GIHETTY
Sbjct: 263 FQPSFLGMEAAGIHETTY 280
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 528 bits (1359), Expect = e-149
Identities = 258/267 (96%), Positives = 264/267 (98%)
Frame = +2
Query: 26 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 205
M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 206 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 385
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 386 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 565
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLD 180
Query: 566 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKS 745
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKS 240
Query: 746 YELPDGQVITIGNERFRCPEALFQPSF 826
YELPDGQVITIGNERFRCPEALFQPSF
Sbjct: 241 YELPDGQVITIGNERFRCPEALFQPSF 267
Score = 30.8 bits (68), Expect = 5.1
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 811 FPTKFLGLESVGIHETTY 864
F FLG+E+ GIHETTY
Sbjct: 263 FQPSFLGMEAAGIHETTY 280
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 527 bits (1357), Expect = e-149
Identities = 257/267 (96%), Positives = 263/267 (98%)
Frame = +2
Query: 26 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 205
M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 206 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 385
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 386 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 565
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLD 180
Query: 566 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKS 745
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKS 240
Query: 746 YELPDGQVITIGNERFRCPEALFQPSF 826
YELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 241 YELPDGQVITIGNERFRCPEAMFQPSF 267
Score = 30.8 bits (68), Expect = 5.1
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 811 FPTKFLGLESVGIHETTY 864
F FLG+E+ GIHETTY
Sbjct: 263 FQPSFLGMEAAGIHETTY 280
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 526 bits (1355), Expect = e-149
Identities = 257/267 (96%), Positives = 263/267 (98%)
Frame = +2
Query: 26 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 205
M D+DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 206 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 385
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 386 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 565
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 566 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKS 745
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 746 YELPDGQVITIGNERFRCPEALFQPSF 826
YELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSF 267
Score = 30.4 bits (67), Expect = 6.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 811 FPTKFLGLESVGIHETTY 864
F FLG+ES GIHET+Y
Sbjct: 263 FQPSFLGMESAGIHETSY 280
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 526 bits (1354), Expect = e-149
Identities = 257/267 (96%), Positives = 262/267 (98%)
Frame = +2
Query: 26 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 205
M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 206 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 385
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 386 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 565
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLD 180
Query: 566 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKS 745
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKS 240
Query: 746 YELPDGQVITIGNERFRCPEALFQPSF 826
YELPDGQVITIGNERFRCPEA FQPSF
Sbjct: 241 YELPDGQVITIGNERFRCPEATFQPSF 267
Score = 31.6 bits (70), Expect = 3.0
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 805 SSFPTKFLGLESVGIHETTY 864
++F FLG+E+ GIHETTY
Sbjct: 261 ATFQPSFLGMEAAGIHETTY 280
>sp|P15475|ACTB_XENBO Actin, cytoplasmic 1 (Beta actin)
Length = 376
Score = 526 bits (1354), Expect = e-149
Identities = 255/267 (95%), Positives = 264/267 (98%)
Frame = +2
Query: 26 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 205
M+D+D+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 206 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 385
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 386 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 565
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 566 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKS 745
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 746 YELPDGQVITIGNERFRCPEALFQPSF 826
YELPDGQVITIGNERFRCPEALFQPSF
Sbjct: 241 YELPDGQVITIGNERFRCPEALFQPSF 267
Score = 30.0 bits (66), Expect = 8.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 811 FPTKFLGLESVGIHETTY 864
F FLG+ES GIHETT+
Sbjct: 263 FQPSFLGMESCGIHETTF 280
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 526 bits (1354), Expect = e-149
Identities = 256/267 (95%), Positives = 263/267 (98%)
Frame = +2
Query: 26 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 205
M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 206 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 385
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 386 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 565
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLD 180
Query: 566 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKS 745
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKS 240
Query: 746 YELPDGQVITIGNERFRCPEALFQPSF 826
YELPDGQVITIGNERFRCPEA++QPSF
Sbjct: 241 YELPDGQVITIGNERFRCPEAMYQPSF 267
Score = 30.8 bits (68), Expect = 5.1
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 811 FPTKFLGLESVGIHETTY 864
+ FLG+ES GIHETTY
Sbjct: 263 YQPSFLGMESAGIHETTY 280
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 526 bits (1354), Expect = e-149
Identities = 257/267 (96%), Positives = 262/267 (98%)
Frame = +2
Query: 26 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 205
M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 206 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 385
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 386 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 565
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLD 180
Query: 566 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKS 745
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA+ SSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKS 240
Query: 746 YELPDGQVITIGNERFRCPEALFQPSF 826
YELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 241 YELPDGQVITIGNERFRCPEAVFQPSF 267
Score = 32.0 bits (71), Expect = 2.3
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 811 FPTKFLGLESVGIHETTY 864
F FLG+ES GIHETTY
Sbjct: 263 FQPSFLGMESAGIHETTY 280
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 526 bits (1354), Expect = e-149
Identities = 257/267 (96%), Positives = 263/267 (98%)
Frame = +2
Query: 26 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 205
M DE+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 206 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 385
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 386 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 565
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 566 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKS 745
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 746 YELPDGQVITIGNERFRCPEALFQPSF 826
YELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSF 267
Score = 32.0 bits (71), Expect = 2.3
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 811 FPTKFLGLESVGIHETTY 864
F FLG+ES GIHETTY
Sbjct: 263 FQPSFLGMESAGIHETTY 280
>sp|P30162|ACT1_ONCVO Actin-1
Length = 376
Score = 526 bits (1354), Expect = e-149
Identities = 257/267 (96%), Positives = 263/267 (98%)
Frame = +2
Query: 26 MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 205
M DE+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 206 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 385
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 386 TQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 565
TQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 566 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKS 745
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKS
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240
Query: 746 YELPDGQVITIGNERFRCPEALFQPSF 826
YELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 241 YELPDGQVITVGNERFRCPEALFQPSF 267
Score = 30.4 bits (67), Expect = 6.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 811 FPTKFLGLESVGIHETTY 864
F FLG+ES GIHE+TY
Sbjct: 263 FQPSFLGMESAGIHESTY 280
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,797,964
Number of Sequences: 369166
Number of extensions: 2129165
Number of successful extensions: 7428
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7270
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)