Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_P14-2
(392 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O43852|CALU_HUMAN Calumenin precursor (Crocalbin) (IEF S... 97 2e-20
sp|O35887|CALU_MOUSE Calumenin precursor (Crocalbin) 97 2e-20
sp|O35783|CALU_RAT Calumenin precursor (Crocalbin) (CBP-50) 95 6e-20
sp|Q15293|RCN1_HUMAN Reticulocalbin-1 precursor 88 7e-18
sp|Q05186|RCN1_MOUSE Reticulocalbin-1 precursor 87 1e-17
sp|O93434|RCN1_FUGRU Reticulocalbin-1 precursor 84 1e-16
sp|Q8BH97|RCN3_MOUSE Reticulocalbin-3 precursor 82 3e-16
sp|Q96D15|RCN3_HUMAN Reticulocalbin-3 precursor (EF-hand ca... 80 1e-15
sp|Q62703|RCN2_RAT Reticulocalbin-2 precursor (Calcium-bind... 57 2e-08
sp|Q8BP92|RCN2_MOUSE Reticulocalbin-2 precursor (Taipoxin-a... 57 2e-08
>sp|O43852|CALU_HUMAN Calumenin precursor (Crocalbin) (IEF SSP 9302)
Length = 315
Score = 96.7 bits (239), Expect = 2e-20
Identities = 43/70 (61%), Positives = 55/70 (78%)
Frame = +2
Query: 2 KDGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATD 181
+DGK+D +E WILP D++H AE HL+ ++D NKDG LTK EI++KYD+FVGSQATD
Sbjct: 245 RDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATD 304
Query: 182 FGDALTRHAE 211
FG+AL RH E
Sbjct: 305 FGEALVRHDE 314
>sp|O35887|CALU_MOUSE Calumenin precursor (Crocalbin)
Length = 315
Score = 96.7 bits (239), Expect = 2e-20
Identities = 43/70 (61%), Positives = 55/70 (78%)
Frame = +2
Query: 2 KDGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATD 181
+DGK+D +E WILP D++H AE HL+ ++D NKDG LTK EI++KYD+FVGSQATD
Sbjct: 245 RDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQNKDGKLTKEEIVDKYDLFVGSQATD 304
Query: 182 FGDALTRHAE 211
FG+AL RH E
Sbjct: 305 FGEALVRHDE 314
>sp|O35783|CALU_RAT Calumenin precursor (Crocalbin) (CBP-50)
Length = 315
Score = 94.7 bits (234), Expect = 6e-20
Identities = 42/70 (60%), Positives = 55/70 (78%)
Frame = +2
Query: 2 KDGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATD 181
+DGK+D +E WILP D++H AE HL+ ++D +KDG LTK EI++KYD+FVGSQATD
Sbjct: 245 RDGKMDKEETKDWILPSDYDHAEAEARHLVYESDQDKDGKLTKEEIVDKYDLFVGSQATD 304
Query: 182 FGDALTRHAE 211
FG+AL RH E
Sbjct: 305 FGEALVRHDE 314
>sp|Q15293|RCN1_HUMAN Reticulocalbin-1 precursor
Length = 331
Score = 87.8 bits (216), Expect = 7e-18
Identities = 43/72 (59%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +2
Query: 2 KDGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATD 181
KDGKLD DEI WILP D++H AE HL+ ++D NKD LTK EILE +++FVGSQAT+
Sbjct: 260 KDGKLDKDEIRHWILPQDYDHAQAEARHLVYESDKNKDEKLTKEEILENWNMFVGSQATN 319
Query: 182 FGDALTR-HAEL 214
+G+ LT+ H EL
Sbjct: 320 YGEDLTKNHDEL 331
>sp|Q05186|RCN1_MOUSE Reticulocalbin-1 precursor
Length = 325
Score = 87.0 bits (214), Expect = 1e-17
Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +2
Query: 2 KDGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATD 181
KDGKLD DEI WILP D++H AE HL+ ++D NKD LTK EIL+ +++FVGSQAT+
Sbjct: 254 KDGKLDKDEIRHWILPQDYDHAQAEARHLVYESDKNKDEMLTKEEILDNWNMFVGSQATN 313
Query: 182 FGDALTR-HAEL 214
+G+ LT+ H EL
Sbjct: 314 YGEDLTKNHDEL 325
>sp|O93434|RCN1_FUGRU Reticulocalbin-1 precursor
Length = 322
Score = 84.0 bits (206), Expect = 1e-16
Identities = 40/72 (55%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +2
Query: 2 KDGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATD 181
KDGK+D DEI WI+P D++H AE HL+ ++D +KD LTK EIL+ +++FVGSQAT+
Sbjct: 251 KDGKMDLDEIRHWIMPQDYDHAQAEARHLVYESDKDKDQMLTKEEILDNWNMFVGSQATN 310
Query: 182 FGDALTR-HAEL 214
+G+ LTR H EL
Sbjct: 311 YGEDLTRNHDEL 322
>sp|Q8BH97|RCN3_MOUSE Reticulocalbin-3 precursor
Length = 328
Score = 82.4 bits (202), Expect = 3e-16
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +2
Query: 2 KDGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATD 181
KDG+LD E+G W+LP + E NHL+ ++D +KDG L+K EIL +++FVGSQAT+
Sbjct: 257 KDGRLDGSEVGYWVLPPSQDQPLVEANHLLHESDTDKDGRLSKAEILSNWNMFVGSQATN 316
Query: 182 FGDALTRH 205
+G+ LTRH
Sbjct: 317 YGEDLTRH 324
>sp|Q96D15|RCN3_HUMAN Reticulocalbin-3 precursor (EF-hand calcium-binding protein RLP49)
Length = 328
Score = 80.1 bits (196), Expect = 1e-15
Identities = 35/68 (51%), Positives = 49/68 (72%)
Frame = +2
Query: 2 KDGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATD 181
KDG LD E+G W+LP + E NHL+ ++D +KDG L+K EIL +++FVGSQAT+
Sbjct: 257 KDGHLDGSEVGHWVLPPAQDQPLVEANHLLHESDTDKDGRLSKAEILGNWNMFVGSQATN 316
Query: 182 FGDALTRH 205
+G+ LTRH
Sbjct: 317 YGEDLTRH 324
>sp|Q62703|RCN2_RAT Reticulocalbin-2 precursor (Calcium-binding protein ERC-55)
(Taipoxin-associated calcium-binding protein 49)
(TCBP-49)
Length = 320
Score = 56.6 bits (135), Expect = 2e-08
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +2
Query: 5 DGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATDF 184
DG+LD E+ W++P + E HL+++ D N D L++ EILE D+F+ S+ATD+
Sbjct: 247 DGRLDPQELLSWVVPNNQGIAQEEALHLIDEMDLNSDKKLSEEEILENQDLFLTSEATDY 306
Query: 185 GDAL 196
G L
Sbjct: 307 GRQL 310
Score = 28.1 bits (61), Expect = 6.6
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +2
Query: 5 DGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATDF 184
DG L +E+ +WI ++ E + D N DG +T ++Y+V + + DF
Sbjct: 81 DGFLTENELSQWIQMSFKHYAMQEAKQQFVEYDKNSDGTVT----WDEYNVQMYDRVIDF 136
Query: 185 GD 190
+
Sbjct: 137 DE 138
>sp|Q8BP92|RCN2_MOUSE Reticulocalbin-2 precursor (Taipoxin-associated calcium-binding
protein 49) (TCBP-49)
Length = 320
Score = 56.6 bits (135), Expect = 2e-08
Identities = 26/64 (40%), Positives = 40/64 (62%)
Frame = +2
Query: 5 DGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATDF 184
DG+LD E+ W++P + E HL+++ D N D L++ EILE D+F+ S+ATD+
Sbjct: 247 DGRLDPQELLSWVVPNNQGIAQEEALHLIDEMDLNSDKKLSEEEILENQDLFLTSEATDY 306
Query: 185 GDAL 196
G L
Sbjct: 307 GRQL 310
Score = 27.7 bits (60), Expect = 8.6
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 5 DGKLDHDEIGKWILPLDHNHVTAETNHLMEQTDANKDGYLTKVEILEKYDVFVGSQATDF 184
DG L +E+ +WI ++ E + D N DG +T ++Y++ + + DF
Sbjct: 81 DGFLTENELSQWIQMSFKHYAMQEAKQQFVEYDKNSDGAVT----WDEYNIQMYDRVIDF 136
Query: 185 GD 190
+
Sbjct: 137 DE 138
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,192,885
Number of Sequences: 369166
Number of extensions: 841664
Number of successful extensions: 2203
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2203
length of database: 68,354,980
effective HSP length: 96
effective length of database: 50,620,420
effective search space used: 1721094280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)