Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_O13-2
(130 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9CS42|PRPS2_MOUSE Ribose-phosphate pyrophosphokinase II... 58 6e-09
sp|P21108|PRPS3_HUMAN Ribose-phosphate pyrophosphokinase II... 57 1e-08
sp|P09330|PRPS2_RAT Ribose-phosphate pyrophosphokinase II (... 57 1e-08
sp|Q4R4R7|PRPS2_MACFA Ribose-phosphate pyrophosphokinase II... 57 2e-08
sp|P60891|PRPS1_HUMAN Ribose-phosphate pyrophosphokinase I ... 56 2e-08
sp|Q9D7G0|PRPS1_MOUSE Ribose-phosphate pyrophosphokinase I ... 56 2e-08
sp|P65235|KPRS_NEIMB Ribose-phosphate pyrophosphokinase (RP... 36 0.031
sp|Q12265|KPR5_YEAST Probable ribose-phosphate pyrophosphok... 36 0.031
sp|Q899I8|KPRS_CLOTE Ribose-phosphate pyrophosphokinase (RP... 35 0.054
sp|P38689|KPR3_YEAST Ribose-phosphate pyrophosphokinase 3 (... 35 0.070
>sp|Q9CS42|PRPS2_MOUSE Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
Length = 318
Score = 58.2 bits (139), Expect = 6e-09
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +1
Query: 1 IFSGPAISRIESSKFTAIVVTNTIDQDKVMKQSNKVQCIDVSM 129
IFSGPAISRI S+ F A+VVTNTI Q+ MK +K+Q ID+SM
Sbjct: 252 IFSGPAISRINSAAFEAVVVTNTIPQEDKMKHCSKIQVIDISM 294
>sp|P21108|PRPS3_HUMAN Ribose-phosphate pyrophosphokinase III (Phosphoribosyl
pyrophosphate synthetase III) (PRS-III) (Phosphoribosyl
pyrophosphate synthetase 1-like 1)
Length = 318
Score = 57.0 bits (136), Expect = 1e-08
Identities = 27/43 (62%), Positives = 35/43 (81%)
Frame = +1
Query: 1 IFSGPAISRIESSKFTAIVVTNTIDQDKVMKQSNKVQCIDVSM 129
IFSGPAISRI ++ F A+VVTNTI QD+ MK +K++ ID+SM
Sbjct: 252 IFSGPAISRINTACFEAVVVTNTIPQDEKMKHCSKIRVIDISM 294
>sp|P09330|PRPS2_RAT Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
Length = 318
Score = 57.0 bits (136), Expect = 1e-08
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 1 IFSGPAISRIESSKFTAIVVTNTIDQDKVMKQSNKVQCIDVSM 129
IFSGPAISRI ++ F A+VVTNTI Q+ MK +K+Q ID+SM
Sbjct: 252 IFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISM 294
>sp|Q4R4R7|PRPS2_MACFA Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
sp|P11908|PRPS2_HUMAN Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II) (PPRibP)
Length = 318
Score = 56.6 bits (135), Expect = 2e-08
Identities = 27/43 (62%), Positives = 33/43 (76%)
Frame = +1
Query: 1 IFSGPAISRIESSKFTAIVVTNTIDQDKVMKQSNKVQCIDVSM 129
IFSGPAISRI ++ F A+VVTNTI Q+ MK K+Q ID+SM
Sbjct: 252 IFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISM 294
>sp|P60891|PRPS1_HUMAN Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I) (PPRibP)
sp|P60892|PRPS1_RAT Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I)
Length = 318
Score = 56.2 bits (134), Expect = 2e-08
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 1 IFSGPAISRIESSKFTAIVVTNTIDQDKVMKQSNKVQCIDVSM 129
IFSGPAISRI ++ F A+VVTNTI Q+ MK +K+Q ID+SM
Sbjct: 252 IFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISM 294
>sp|Q9D7G0|PRPS1_MOUSE Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I)
Length = 318
Score = 56.2 bits (134), Expect = 2e-08
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +1
Query: 1 IFSGPAISRIESSKFTAIVVTNTIDQDKVMKQSNKVQCIDVSM 129
IFSGPAISRI ++ F A+VVTNTI Q+ MK +K+Q ID+SM
Sbjct: 252 IFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISM 294
>sp|P65235|KPRS_NEIMB Ribose-phosphate pyrophosphokinase (RPPK) (Phosphoribosyl
pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP
synthetase)
sp|P65234|KPRS_NEIMA Ribose-phosphate pyrophosphokinase (RPPK) (Phosphoribosyl
pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP
synthetase)
Length = 327
Score = 35.8 bits (81), Expect = 0.031
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 1 IFSGPAISRIESSKFTAIVVTNTIDQDKVMKQSNKVQCIDVS 126
+FSG A+SRI SS+ +VVT+TI + K ++++ + ++
Sbjct: 254 VFSGEAVSRIASSEIDQVVVTDTIPLSEAAKNCDRIRQVTIA 295
>sp|Q12265|KPR5_YEAST Probable ribose-phosphate pyrophosphokinase 5 (Phosphoribosyl
pyrophosphate synthetase 5)
Length = 496
Score = 35.8 bits (81), Expect = 0.031
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 1 IFSGPAISRIESSKFTAIVVTNTIDQDKVMKQ--SNKVQCIDVS 126
+FSG A+ RI S ++++NT+ QD+ ++ ++V IDVS
Sbjct: 429 VFSGDALERIGQSSIDKLIISNTVPQDRTLQYLGKDRVDVIDVS 472
>sp|Q899I8|KPRS_CLOTE Ribose-phosphate pyrophosphokinase (RPPK) (Phosphoribosyl
pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP
synthetase)
Length = 320
Score = 35.0 bits (79), Expect = 0.054
Identities = 16/42 (38%), Positives = 28/42 (66%)
Frame = +1
Query: 1 IFSGPAISRIESSKFTAIVVTNTIDQDKVMKQSNKVQCIDVS 126
+ SGPA+ RI++S ++ NTID K+ K S+K++ + V+
Sbjct: 259 VLSGPAMERIDNSVIKELITLNTIDISKI-KPSDKIKVLSVA 299
>sp|P38689|KPR3_YEAST Ribose-phosphate pyrophosphokinase 3 (Phosphoribosyl pyrophosphate
synthetase 3)
Length = 320
Score = 34.7 bits (78), Expect = 0.070
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 1 IFSGPAISRIESSKFTAIVVTNTIDQDKVMKQSNKVQCIDVS 126
+ SG AI I +SK +V TNT+ ++ +K+ K+ ID+S
Sbjct: 254 VLSGRAIENINNSKLDRVVCTNTVPFEEKIKKCPKLAVIDIS 295
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.317 0.128 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,085,985
Number of Sequences: 369166
Number of extensions: 91394
Number of successful extensions: 307
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 68,354,980
effective HSP length: 16
effective length of database: 65,399,220
effective search space used: 1700379720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)