Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_N17
(442 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O18783|PLMN_MACEU Plasminogen precursor [Contains: Plasm... 57 2e-08
sp|Q5E9Z2|HABP2_BOVIN Hyaluronan-binding protein 2 precurso... 56 3e-08
sp|P29598|UROK_RAT Urokinase-type plasminogen activator pre... 55 5e-08
sp|P21842|MCPT1_CANFA Chymase precursor (Mast cell protease I) 54 1e-07
sp|P28293|CATG_MOUSE Cathepsin G precursor (Vimentin-specif... 54 2e-07
sp|Q14520|HABP2_HUMAN Hyaluronan-binding protein 2 precurso... 54 2e-07
sp|P04813|CTR2_CANFA Chymotrypsinogen 2 precursor [Contains... 54 2e-07
sp|Q6L711|HABP2_RAT Hyaluronan-binding protein 2 precursor ... 54 2e-07
sp|P00766|CTRA_BOVIN Chymotrypsinogen A [Contains: Chymotry... 54 2e-07
sp|P23946|MCPT1_HUMAN Chymase precursor (Mast cell protease I) 53 3e-07
>sp|O18783|PLMN_MACEU Plasminogen precursor [Contains: Plasmin heavy chain A; Activation
peptide; Plasmin heavy chain A, short form; Plasmin light
chain B]
Length = 806
Score = 57.0 bits (136), Expect = 2e-08
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Frame = -1
Query: 436 LVPNSLDCITAGWNHKLETNSRPLLGK-SVNLYNTTNCKSLTQFDDDKLARYFCSDNNMG 260
+VP+ C GW T+ R LL + S+ + + C + + C+ + +G
Sbjct: 688 MVPDRTLCHVTGWGDTQGTSPRGLLKQASLPVIDNRVCNRHEYLNGRVKSTELCAGHLVG 747
Query: 259 SSAIFNGESGGPLICSIDGSKVIAGVVSKSINSARATSIRLFTRVDYMLPWIKLTMNNN 83
G+SGGPLIC D V+ GV S + AR ++ RV + WI+ M NN
Sbjct: 748 RGDSCQGDSGGPLICFEDDKYVLQGVTSWGLGCARPNKPGVYVRVSRYISWIEDVMKNN 806
>sp|Q5E9Z2|HABP2_BOVIN Hyaluronan-binding protein 2 precursor [Contains:
Hyaluronan-binding protein 2 50 kDa heavy chain;
Hyaluronan-binding protein 2 50 kDa heavy chain
alternate form; Hyaluronan-binding protein 2 27 kDa
light chain; Hyaluronan-binding protein 2 27 kDa light
chain alternate form]
Length = 558
Score = 56.2 bits (134), Expect = 3e-08
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 3/112 (2%)
Frame = -1
Query: 418 DCITAGWN-HKLETNSRPLLGKSVNLYNTTNCKSLTQFDDDKLARYFCSDN--NMGSSAI 248
+C +GW + SR LL V L + T C S +D C+ N G +
Sbjct: 444 ECYISGWGVTETGEGSRHLLDAKVKLISNTICNSRQLYDHSIDDNMICAGNLQKPGQDSC 503
Query: 247 FNGESGGPLICSIDGSKVIAGVVSKSINSARATSIRLFTRVDYMLPWIKLTM 92
G+SGGPL C DG+ I G+VS + + + +T+V L WIK TM
Sbjct: 504 -QGDSGGPLTCEKDGTSYIYGIVSWGLECGKRPGV--YTQVTKFLTWIKATM 552
>sp|P29598|UROK_RAT Urokinase-type plasminogen activator precursor (uPA) (U-plasminogen
activator) [Contains: Urokinase-type plasminogen
activator long chain A; Urokinase-type plasminogen
activator short chain A; Urokinase-type plasminogen
activator chain B]
Length = 432
Score = 55.5 bits (132), Expect = 5e-08
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = -1
Query: 430 PNSLDCITAGWNHKLETN---SRPLLGKSVNLYNTTNCKSLTQFDDDKLARYFCSDNNMG 260
P DC G+ + T+ + L V + + CK + + + C+ +
Sbjct: 309 PFGSDCEITGFGQESATDYFYPKDLKMSVVKIISHEQCKQPHYYGSEINYKMLCAADPEW 368
Query: 259 SSAIFNGESGGPLICSIDGSKVIAGVVSKSINSARATSIRLFTRVDYMLPWIK 101
+ +G+SGGPLIC+IDG ++G+VS A ++TRV Y L WI+
Sbjct: 369 KTDSCSGDSGGPLICNIDGRPTLSGIVSWGSGCAEKNKPGVYTRVSYFLNWIQ 421
>sp|P21842|MCPT1_CANFA Chymase precursor (Mast cell protease I)
Length = 249
Score = 54.3 bits (129), Expect = 1e-07
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = -1
Query: 439 NLVPNSLDCITAGWNHKLE--TNSRPLLGKSVNLYNTTNCKSLTQFDDDKLARYFCSDNN 266
N VP C AGW + + S L + L + C+ FD + C N
Sbjct: 136 NFVPPGRMCRVAGWGKRQVNGSGSDTLQEVKLRLMDPQACRHYMAFDHNL---QLCVGNP 192
Query: 265 MGSSAIFNGESGGPLICSIDGSKVIAGVVSKSINSARATSIRLFTRVDYMLPWIKLTMNN 86
+ + F G+SGGPL+C + V G+VS N A+ ++ FTR+ + PWI +
Sbjct: 193 RKTKSAFKGDSGGPLLC----AGVAQGIVSYGQNDAKPPAV--FTRISHYRPWINKVLKQ 246
Query: 85 N 83
N
Sbjct: 247 N 247
>sp|P28293|CATG_MOUSE Cathepsin G precursor (Vimentin-specific protease) (VSP)
Length = 261
Score = 53.9 bits (128), Expect = 2e-07
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Frame = -1
Query: 442 KNLVPNSLDCITAGWNHKLETNSRPLLGK-SVNLYNTTNCKSLTQFDDDKLARYFCSDNN 266
K L P L C AGW ++ +L + + + C + QF + + C N
Sbjct: 134 KKLQPGDL-CTVAGWGRVSQSRGTNVLQEVQLRVQMDQMCANRFQFYNSQTQ--ICVGNP 190
Query: 265 MGSSAIFNGESGGPLICSIDGSKVIAGVVSKSINSARATSIRLFTRVDYMLPWIKLTM 92
+ F G+SGGPL+C S V G+VS N+ ++ FT++ +PWIK TM
Sbjct: 191 RERKSAFRGDSGGPLVC----SNVAQGIVSYGSNNGNPPAV--FTKIQSFMPWIKRTM 242
>sp|Q14520|HABP2_HUMAN Hyaluronan-binding protein 2 precursor (Plasma hyaluronan-binding
protein) (Hepatocyte growth factor activator-like
protein) (Factor VII-activating protease) (Factor
seven-activating protease) (FSAP) [Contains:
Hyaluronan-binding protein 2 50 kDa heavy chain;
Hyaluronan-binding protein 2 50 kDa heavy chain
alternate form; Hyaluronan-binding protein 2 27 kDa
light chain; Hyaluronan-binding protein 2 27 kDa light
chain alternate form]
Length = 560
Score = 53.5 bits (127), Expect = 2e-07
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 5/120 (4%)
Frame = -1
Query: 430 PNSLDCITAGWN-HKLETNSRPLLGKSVNLYNTTNCKSLTQFD---DDKLARYFCSDN-N 266
P+ +C +GW + SR LL V L T C S +D DD + C+ N
Sbjct: 442 PSGSECHISGWGVTETGKGSRQLLDAKVKLIANTLCNSRQLYDHMIDDSM---ICAGNLQ 498
Query: 265 MGSSAIFNGESGGPLICSIDGSKVIAGVVSKSINSARATSIRLFTRVDYMLPWIKLTMNN 86
G+SGGPL C DG+ + G+VS + + + +T+V L WIK T+ +
Sbjct: 499 KPGQDTCQGDSGGPLTCEKDGTYYVYGIVSWGLECGKRPGV--YTQVTKFLNWIKATIKS 556
>sp|P04813|CTR2_CANFA Chymotrypsinogen 2 precursor [Contains: Chymotrypsin 2 chain A;
Chymotrypsin 2 chain B; Chymotrypsin 2 chain C]
Length = 263
Score = 53.5 bits (127), Expect = 2e-07
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Frame = -1
Query: 415 CITAGWNHKLETNSRP---LLGKSVNLYNTTNCKSLTQFDDDKLARYFCSDNNMGSSAIF 245
C+T GW TN+ L ++ L + CK +F K+ G S+
Sbjct: 154 CVTTGWGLTKHTNANTPDKLQQAALPLLSNAECK---KFWGSKITDLMVCAGASGVSSCM 210
Query: 244 NGESGGPLICSIDGSKVIAGVVSKSINSARATSIRLFTRVDYMLPWIKLTMNNN 83
G+SGGPL+C DG+ + G+VS + ++ ++ RV ++PW++ + N
Sbjct: 211 -GDSGGPLVCQKDGAWTLVGIVSWGSGTCSTSTPGVYARVTKLIPWVQQILQAN 263
>sp|Q6L711|HABP2_RAT Hyaluronan-binding protein 2 precursor (Plasma hyaluronan-binding
protein) [Contains: Hyaluronan-binding protein 2 50 kDa
heavy chain; Hyaluronan-binding protein 2 50 kDa heavy
chain alternate form; Hyaluronan-binding protein 2 27
kDa light chain; Hyaluronan-binding protein 2 27 kDa
light chain alternate form]
Length = 558
Score = 53.5 bits (127), Expect = 2e-07
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = -1
Query: 430 PNSLDCITAGWN-HKLETNSRPLLGKSVNLYNTTNCKSLTQFDDDKLARYFCSDN-NMGS 257
P+ +C +GW + SR LL V L C S +D C+ N
Sbjct: 440 PSGTECHISGWGVTETGEGSRQLLDAKVKLIANALCNSRQLYDHTIDDSMICAGNLQKPG 499
Query: 256 SAIFNGESGGPLICSIDGSKVIAGVVSKSINSARATSIRLFTRVDYMLPWIKLTMN 89
S G+SGGPL C DG+ + G+VS + + +T+V L WIK TM+
Sbjct: 500 SDTCQGDSGGPLTCEKDGTYYVYGIVSWGQECGKKPGV--YTQVTKFLNWIKTTMH 553
>sp|P00766|CTRA_BOVIN Chymotrypsinogen A [Contains: Chymotrypsin A chain A; Chymotrypsin
A chain B; Chymotrypsin A chain C]
Length = 245
Score = 53.5 bits (127), Expect = 2e-07
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Frame = -1
Query: 415 CITAGWNHKLETNSRP---LLGKSVNLYNTTNCKSL--TQFDDDKLARYFCSDNNMGSSA 251
C+T GW TN+ L S+ L + TNCK T+ D + C+ + SS
Sbjct: 136 CVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMI----CAGASGVSSC 191
Query: 250 IFNGESGGPLICSIDGSKVIAGVVSKSINSARATSIRLFTRVDYMLPWIKLTMNNN 83
+ G+SGGPL+C +G+ + G+VS ++ ++ ++ RV ++ W++ T+ N
Sbjct: 192 M--GDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLAAN 245
>sp|P23946|MCPT1_HUMAN Chymase precursor (Mast cell protease I)
Length = 247
Score = 53.1 bits (126), Expect = 3e-07
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
Frame = -1
Query: 439 NLVPNSLDCITAGWNHK--LETNSRPLLGKSVNLYNTTNCKSLTQFDDDKLARYFCSDNN 266
N VP C AGW L+ S L + L + C FD + C N
Sbjct: 136 NFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNL---QLCVGNP 192
Query: 265 MGSSAIFNGESGGPLICSIDGSKVIAGVVSKSINSARATSIRLFTRVDYMLPWIKLTMNN 86
+ + F G+SGGPL+C + V G+VS + A+ ++ FTR+ + PWI +
Sbjct: 193 RKTKSAFKGDSGGPLLC----AGVAQGIVSYGRSDAKPPAV--FTRISHYRPWINQILQA 246
Query: 85 N 83
N
Sbjct: 247 N 247
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,605,926
Number of Sequences: 369166
Number of extensions: 999444
Number of successful extensions: 2710
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2604
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2294548080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)