Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_N02
(891 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HS... 429 e-120
sp|P08418|HSP70_SCHMA Heat shock 70 kDa homolog protein (HS... 428 e-119
sp|P02827|HSP70_XENLA Heat shock 70 kDa protein (HSP70) 426 e-119
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 426 e-119
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 425 e-119
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 425 e-119
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 425 e-119
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 424 e-118
sp|P34931|HS70L_HUMAN Heat shock 70 kDa protein 1L (Heat sh... 423 e-118
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 423 e-118
>sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HSP70)
Length = 665
Score = 429 bits (1104), Expect = e-120
Identities = 211/283 (74%), Positives = 244/283 (86%)
Frame = +2
Query: 2 TACERAKRTLSSSAQTNIEIDSLSDGMDFYTSITRARFEELCADLFRSTLDPVEKALKDS 181
TACERAKRTLSSSAQ NIEIDSL +G+DFYTSITRARFEELC+DLFRSTLDPVEKAL+D+
Sbjct: 267 TACERAKRTLSSSAQANIEIDSLLEGIDFYTSITRARFEELCSDLFRSTLDPVEKALRDA 326
Query: 182 KLDKGKIHEIVLVGGSIRIPKVQKLLQDYFNGKELNKSINPDEXXXXXXXXXXXILKGDK 361
KLDKG +HEIVLVGGS RIPKVQKLLQD+FNG+ELNKSINPDE IL GDK
Sbjct: 327 KLDKGAVHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILTGDK 386
Query: 362 SEAVQDXXXXXXXXXXXXXETAGGVMTVLIKRNTTIPTKQSQVFSTYSDNQPGVLIQVFE 541
SEAVQD ETAGGVMT LIKRNTTIPTKQ+Q F+TYSDNQPGVLIQV+E
Sbjct: 387 SEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 446
Query: 542 GERTMTKDNNLLGKFDLTGIPPAPRGIPQIEVTYDIDANGILNVSAVERGTGRENKITIT 721
GER M +DNNLLGKF+L+GIPP PRG+PQIEVT+DIDANGILNVSAV++ TG++NKITIT
Sbjct: 447 GERAMKRDNNLLGKFELSGIPPGPRGVPQIEVTFDIDANGILNVSAVDKSTGKQNKITIT 506
Query: 722 NDKGRLSKDQIDKMISDADKFKNDDDKQREKVTAKNALETYAY 850
DKGRLSK++I++M++DA+KFK +D+KQR++V AKN LE+YA+
Sbjct: 507 RDKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAF 549
>sp|P08418|HSP70_SCHMA Heat shock 70 kDa homolog protein (HSP70) (Major surface antigen)
Length = 637
Score = 428 bits (1100), Expect = e-119
Identities = 212/283 (74%), Positives = 244/283 (86%)
Frame = +2
Query: 2 TACERAKRTLSSSAQTNIEIDSLSDGMDFYTSITRARFEELCADLFRSTLDPVEKALKDS 181
TACERAKRTLSSSAQTN+EIDSL DG DFYT ITRARFEEL ADLFR TLDPVEKAL+D+
Sbjct: 263 TACERAKRTLSSSAQTNLEIDSLCDGTDFYTVITRARFEELNADLFRGTLDPVEKALRDA 322
Query: 182 KLDKGKIHEIVLVGGSIRIPKVQKLLQDYFNGKELNKSINPDEXXXXXXXXXXXILKGDK 361
K+DK +IH+IVLVGGS RIPKVQKLLQD+FNGKELNKSINPDE IL G+K
Sbjct: 323 KMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGEK 382
Query: 362 SEAVQDXXXXXXXXXXXXXETAGGVMTVLIKRNTTIPTKQSQVFSTYSDNQPGVLIQVFE 541
EAVQD ETAGGVMT LIKRNTTIPTKQ+Q F+TYSDNQPGVLIQVFE
Sbjct: 383 CEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFE 442
Query: 542 GERTMTKDNNLLGKFDLTGIPPAPRGIPQIEVTYDIDANGILNVSAVERGTGRENKITIT 721
GER +TKDNNLLGKF+L+GIPPAPRG PQIEVT+DIDANGILNVSAV++GTG++NKITIT
Sbjct: 443 GERALTKDNNLLGKFELSGIPPAPRGTPQIEVTFDIDANGILNVSAVDKGTGKQNKITIT 502
Query: 722 NDKGRLSKDQIDKMISDADKFKNDDDKQREKVTAKNALETYAY 850
NDKGRLSK++I++M++DADK+K +D+KQR++V+AKN+LE+Y Y
Sbjct: 503 NDKGRLSKEEIERMVADADKYKAEDEKQRDRVSAKNSLESYVY 545
>sp|P02827|HSP70_XENLA Heat shock 70 kDa protein (HSP70)
Length = 647
Score = 426 bits (1095), Expect = e-119
Identities = 212/283 (74%), Positives = 244/283 (86%)
Frame = +2
Query: 2 TACERAKRTLSSSAQTNIEIDSLSDGMDFYTSITRARFEELCADLFRSTLDPVEKALKDS 181
TAC+RAKRTLSSS+Q +IEIDSL +G+DFYT+ITRARFEELC+DLFR TL+PVEKAL+D+
Sbjct: 266 TACDRAKRTLSSSSQASIEIDSLFEGIDFYTAITRARFEELCSDLFRGTLEPVEKALRDA 325
Query: 182 KLDKGKIHEIVLVGGSIRIPKVQKLLQDYFNGKELNKSINPDEXXXXXXXXXXXILKGDK 361
KLDK +IHEIVLVGGS RIPKVQKLLQD+FNG+ELNKSINPDE IL GDK
Sbjct: 326 KLDKSQIHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMGDK 385
Query: 362 SEAVQDXXXXXXXXXXXXXETAGGVMTVLIKRNTTIPTKQSQVFSTYSDNQPGVLIQVFE 541
SE VQD ETAGGVMTVLIKRNTTIPTKQ+Q F+TYSDNQPGVLIQVFE
Sbjct: 386 SENVQDLLLLDVAPLSLGLETAGGVMTVLIKRNTTIPTKQTQSFTTYSDNQPGVLIQVFE 445
Query: 542 GERTMTKDNNLLGKFDLTGIPPAPRGIPQIEVTYDIDANGILNVSAVERGTGRENKITIT 721
GER MTKDNNLLGKF+L+GIPPAPRG+PQIEVT+DIDANGILNVSAVE+ +G++NKITIT
Sbjct: 446 GERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKSSGKQNKITIT 505
Query: 722 NDKGRLSKDQIDKMISDADKFKNDDDKQREKVTAKNALETYAY 850
NDKGRLSK+ I+KM+ +A+K+K DDD QRE+V AKNALE+YA+
Sbjct: 506 NDKGRLSKEDIEKMVQEAEKYKADDDAQRERVDAKNALESYAF 548
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 426 bits (1095), Expect = e-119
Identities = 216/301 (71%), Positives = 251/301 (83%), Gaps = 5/301 (1%)
Frame = +2
Query: 2 TACERAKRTLSSSAQTNIEIDSLSDGMDFYTSITRARFEELCADLFRSTLDPVEKALKDS 181
TACERAKRTLSSS Q +IEIDSL +G+DFYTSITRARFEEL ADLFR TLDPVEKAL+D+
Sbjct: 265 TACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDA 324
Query: 182 KLDKGKIHEIVLVGGSIRIPKVQKLLQDYFNGKELNKSINPDEXXXXXXXXXXXILKGDK 361
K+DK +IH+IVLVGGS RIPK+QKLLQDYFNGKELNKSINPDE IL GDK
Sbjct: 325 KMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDK 384
Query: 362 SEAVQDXXXXXXXXXXXXXETAGGVMTVLIKRNTTIPTKQSQVFSTYSDNQPGVLIQVFE 541
SE VQD ETAGGVMTVLIKRNTTIPTKQ+Q F+TYSDNQPGVLIQV+E
Sbjct: 385 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
Query: 542 GERTMTKDNNLLGKFDLTGIPPAPRGIPQIEVTYDIDANGILNVSAVERGTGRENKITIT 721
GER MTKDNNLLGKF+LTGIPPAPRG+PQIEVT+DIDANGI+NVSAV++ TG+ENKITIT
Sbjct: 445 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITIT 504
Query: 722 NDKGRLSKDQIDKMISDADKFKNDDDKQREKVTAKNALETYAY-----I*NKLLKIKISS 886
NDKGRLSK+ I++M+ +A+K+K +DD QR+KV+AKN LE+YA+ + ++ LK KIS
Sbjct: 505 NDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISD 564
Query: 887 Q 889
+
Sbjct: 565 E 565
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 425 bits (1093), Expect = e-119
Identities = 211/283 (74%), Positives = 244/283 (86%)
Frame = +2
Query: 2 TACERAKRTLSSSAQTNIEIDSLSDGMDFYTSITRARFEELCADLFRSTLDPVEKALKDS 181
TACERAKRTLSSS Q +IEIDSL +G+DFYTSITRARFEEL ADLFR TLDPVEKAL+D+
Sbjct: 265 TACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDA 324
Query: 182 KLDKGKIHEIVLVGGSIRIPKVQKLLQDYFNGKELNKSINPDEXXXXXXXXXXXILKGDK 361
KLDK +IH+IVLVGGS RIPK+QKLLQD+FNGKELNKSINPDE IL GDK
Sbjct: 325 KLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDK 384
Query: 362 SEAVQDXXXXXXXXXXXXXETAGGVMTVLIKRNTTIPTKQSQVFSTYSDNQPGVLIQVFE 541
SE VQD ETAGGVMTVLIKRNTTIPTKQ+Q F+TYSDNQPGVLIQV+E
Sbjct: 385 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
Query: 542 GERTMTKDNNLLGKFDLTGIPPAPRGIPQIEVTYDIDANGILNVSAVERGTGRENKITIT 721
GER MTKDNNLLGKF+LTGIPPAPRG+PQIEVT+DIDANGILNVSAV++ TG+ENKITIT
Sbjct: 445 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 504
Query: 722 NDKGRLSKDQIDKMISDADKFKNDDDKQREKVTAKNALETYAY 850
NDKGRLSK+ I++M+ +A+K+K +D+KQR+KV++KN+LE+YA+
Sbjct: 505 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAF 547
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 425 bits (1093), Expect = e-119
Identities = 211/283 (74%), Positives = 244/283 (86%)
Frame = +2
Query: 2 TACERAKRTLSSSAQTNIEIDSLSDGMDFYTSITRARFEELCADLFRSTLDPVEKALKDS 181
TACERAKRTLSSS Q +IEIDSL +G+DFYTSITRARFEEL ADLFR TLDPVEKAL+D+
Sbjct: 265 TACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDA 324
Query: 182 KLDKGKIHEIVLVGGSIRIPKVQKLLQDYFNGKELNKSINPDEXXXXXXXXXXXILKGDK 361
KLDK +IH+IVLVGGS RIPK+QKLLQD+FNGKELNKSINPDE IL GDK
Sbjct: 325 KLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDK 384
Query: 362 SEAVQDXXXXXXXXXXXXXETAGGVMTVLIKRNTTIPTKQSQVFSTYSDNQPGVLIQVFE 541
SE VQD ETAGGVMTVLIKRNTTIPTKQ+Q F+TYSDNQPGVLIQV+E
Sbjct: 385 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
Query: 542 GERTMTKDNNLLGKFDLTGIPPAPRGIPQIEVTYDIDANGILNVSAVERGTGRENKITIT 721
GER MTKDNNLLGKF+LTGIPPAPRG+PQIEVT+DIDANGILNVSAV++ TG+ENKITIT
Sbjct: 445 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 504
Query: 722 NDKGRLSKDQIDKMISDADKFKNDDDKQREKVTAKNALETYAY 850
NDKGRLSK+ I++M+ +A+K+K +D+KQR+KV++KN+LE+YA+
Sbjct: 505 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAF 547
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 425 bits (1093), Expect = e-119
Identities = 211/283 (74%), Positives = 244/283 (86%)
Frame = +2
Query: 2 TACERAKRTLSSSAQTNIEIDSLSDGMDFYTSITRARFEELCADLFRSTLDPVEKALKDS 181
TACERAKRTLSSS Q +IEIDSL +G+DFYTSITRARFEEL ADLFR TLDPVEKAL+D+
Sbjct: 265 TACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDA 324
Query: 182 KLDKGKIHEIVLVGGSIRIPKVQKLLQDYFNGKELNKSINPDEXXXXXXXXXXXILKGDK 361
KLDK +IH+IVLVGGS RIPK+QKLLQD+FNGKELNKSINPDE IL GDK
Sbjct: 325 KLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDK 384
Query: 362 SEAVQDXXXXXXXXXXXXXETAGGVMTVLIKRNTTIPTKQSQVFSTYSDNQPGVLIQVFE 541
SE VQD ETAGGVMTVLIKRNTTIPTKQ+Q F+TYSDNQPGVLIQV+E
Sbjct: 385 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
Query: 542 GERTMTKDNNLLGKFDLTGIPPAPRGIPQIEVTYDIDANGILNVSAVERGTGRENKITIT 721
GER MTKDNNLLGKF+LTGIPPAPRG+PQIEVT+DIDANGILNVSAV++ TG+ENKITIT
Sbjct: 445 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 504
Query: 722 NDKGRLSKDQIDKMISDADKFKNDDDKQREKVTAKNALETYAY 850
NDKGRLSK+ I++M+ +A+K+K +D+KQR+KV++KN+LE+YA+
Sbjct: 505 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAF 547
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 424 bits (1089), Expect = e-118
Identities = 210/283 (74%), Positives = 244/283 (86%)
Frame = +2
Query: 2 TACERAKRTLSSSAQTNIEIDSLSDGMDFYTSITRARFEELCADLFRSTLDPVEKALKDS 181
TACERAKRTLSSS Q +IEIDSL +G+DFYTSITRARFEEL ADLFR TLDPVEKAL+D+
Sbjct: 265 TACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDA 324
Query: 182 KLDKGKIHEIVLVGGSIRIPKVQKLLQDYFNGKELNKSINPDEXXXXXXXXXXXILKGDK 361
KLDK +IH+IVLVGGS RIPK+QKLLQD+FNGKELNKSINPDE IL GDK
Sbjct: 325 KLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDK 384
Query: 362 SEAVQDXXXXXXXXXXXXXETAGGVMTVLIKRNTTIPTKQSQVFSTYSDNQPGVLIQVFE 541
SE VQD ETAGGVMTVLIKRNTTIPTKQ+Q F+TYSDNQPGVLIQV+E
Sbjct: 385 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 444
Query: 542 GERTMTKDNNLLGKFDLTGIPPAPRGIPQIEVTYDIDANGILNVSAVERGTGRENKITIT 721
GER MTKDNNLLGKF+LTGIPPAPRG+PQIEVT+DIDANGILNVSAV++ TG+ENKITIT
Sbjct: 445 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 504
Query: 722 NDKGRLSKDQIDKMISDADKFKNDDDKQREKVTAKNALETYAY 850
NDKGRLSK+ I++M+ +A+K+K +D+KQR+KV++KN+L++YA+
Sbjct: 505 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLKSYAF 547
>sp|P34931|HS70L_HUMAN Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein 1-like) (Heat
shock 70 kDa protein 1-Hom) (HSP70-Hom)
Length = 641
Score = 423 bits (1088), Expect = e-118
Identities = 207/283 (73%), Positives = 242/283 (85%)
Frame = +2
Query: 2 TACERAKRTLSSSAQTNIEIDSLSDGMDFYTSITRARFEELCADLFRSTLDPVEKALKDS 181
TACERAKRTLSSS Q N+EIDSL +G+DFYTSITRARFEELCADLFR TL+PVEKAL+D+
Sbjct: 267 TACERAKRTLSSSTQANLEIDSLYEGIDFYTSITRARFEELCADLFRGTLEPVEKALRDA 326
Query: 182 KLDKGKIHEIVLVGGSIRIPKVQKLLQDYFNGKELNKSINPDEXXXXXXXXXXXILKGDK 361
K+DK KIH+IVLVGGS RIPKVQ+LLQDYFNG++LNKSINPDE IL GDK
Sbjct: 327 KMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDK 386
Query: 362 SEAVQDXXXXXXXXXXXXXETAGGVMTVLIKRNTTIPTKQSQVFSTYSDNQPGVLIQVFE 541
SE VQD ETAGGVMT LIKRN+TIPTKQ+Q+F+TYSDNQPGVLIQV+E
Sbjct: 387 SEKVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYE 446
Query: 542 GERTMTKDNNLLGKFDLTGIPPAPRGIPQIEVTYDIDANGILNVSAVERGTGRENKITIT 721
GER MTKDNNLLG+FDLTGIPPAPRG+PQIEVT+DIDANGILNV+A ++ TG+ NKITIT
Sbjct: 447 GERAMTKDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKVNKITIT 506
Query: 722 NDKGRLSKDQIDKMISDADKFKNDDDKQREKVTAKNALETYAY 850
NDKGRLSK++I++M+ DA+K+K +D+ QREK+ AKNALE+YA+
Sbjct: 507 NDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAF 549
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 423 bits (1088), Expect = e-118
Identities = 206/283 (72%), Positives = 243/283 (85%)
Frame = +2
Query: 2 TACERAKRTLSSSAQTNIEIDSLSDGMDFYTSITRARFEELCADLFRSTLDPVEKALKDS 181
TACERAKRTLSSS+Q +IEIDSL +G+DFYTSITRARFEE+C+DLFR TL+PVEKAL+D+
Sbjct: 267 TACERAKRTLSSSSQASIEIDSLFEGIDFYTSITRARFEEMCSDLFRGTLEPVEKALRDA 326
Query: 182 KLDKGKIHEIVLVGGSIRIPKVQKLLQDYFNGKELNKSINPDEXXXXXXXXXXXILKGDK 361
K+DK +IH++VLVGGS RIPKVQKLLQD+FNG+ELNKSINPDE IL GDK
Sbjct: 327 KMDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSGDK 386
Query: 362 SEAVQDXXXXXXXXXXXXXETAGGVMTVLIKRNTTIPTKQSQVFSTYSDNQPGVLIQVFE 541
SE VQD ETAGGVMT LIKRNTTIP+KQ+Q F+TYSDNQPGV+IQV+E
Sbjct: 387 SENVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYE 446
Query: 542 GERTMTKDNNLLGKFDLTGIPPAPRGIPQIEVTYDIDANGILNVSAVERGTGRENKITIT 721
GER MTKDNNLLGKF+L+GIPPAPRG+PQIEVT+DIDANGILNVSAV++ TG+ENKITIT
Sbjct: 447 GERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 506
Query: 722 NDKGRLSKDQIDKMISDADKFKNDDDKQREKVTAKNALETYAY 850
NDKGRLSK+ I++M+ DADK+K +DD QREK+ AKN+LE+YA+
Sbjct: 507 NDKGRLSKEDIERMVQDADKYKAEDDAQREKIAAKNSLESYAF 549
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,584,128
Number of Sequences: 369166
Number of extensions: 1521478
Number of successful extensions: 5616
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4995
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8934348180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)