Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_M22
(449 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P17817|P5CR_SOYBN Pyrroline-5-carboxylate reductase (P5C... 89 3e-18
sp|P74572|PROC_SYNY3 Pyrroline-5-carboxylate reductase (P5C... 88 8e-18
sp|Q04708|P5CR_PEA Pyrroline-5-carboxylate reductase (P5CR)... 86 5e-17
sp|P54904|P5CR1_ARATH Pyrroline-5-carboxylate reductase (P5... 81 1e-15
sp|Q96C36|P5CR2_HUMAN Pyrroline-5-carboxylate reductase 2 (... 79 4e-15
sp|Q5RAQ3|P5CR2_PONPY Pyrroline-5-carboxylate reductase 2 (... 79 4e-15
sp|Q922W5|P5CR1_MOUSE Pyrroline-5-carboxylate reductase 1 (... 79 5e-15
sp|P32322|P5CR1_HUMAN Pyrroline-5-carboxylate reductase 1 (... 79 5e-15
sp|Q922Q4|P5CR2_MOUSE Pyrroline-5-carboxylate reductase 2 (... 77 2e-14
sp|Q6AY23|P5CR2_RAT Pyrroline-5-carboxylate reductase 2 (P5... 77 2e-14
>sp|P17817|P5CR_SOYBN Pyrroline-5-carboxylate reductase (P5CR) (P5C reductase)
Length = 274
Score = 89.4 bits (220), Expect = 3e-18
Identities = 49/99 (49%), Positives = 61/99 (61%)
Frame = +3
Query: 6 IFGSVCKVCVAVSEDNIDXXXXXXXXXXAYMYVVAEAMIDAGVKMGLPRDVSNELVSQTM 185
+FGS+ K+ A E D AY+Y+ EA+ D GV GLPRD+S L SQT+
Sbjct: 157 LFGSIGKIWKA-EEKYFDAITGLSGSGPAYVYLAIEALADGGVAAGLPRDLSLSLASQTV 215
Query: 186 IGAGKMIQLTKEHPMQLKDRVTSPGGTTIFGIAKLEELG 302
+GA M+ T +HP QLKD VTSPGGTTI GI +LE G
Sbjct: 216 LGAASMVSQTGKHPGQLKDDVTSPGGTTITGIHELENGG 254
>sp|P74572|PROC_SYNY3 Pyrroline-5-carboxylate reductase (P5CR) (P5C reductase)
Length = 267
Score = 88.2 bits (217), Expect = 8e-18
Identities = 46/100 (46%), Positives = 67/100 (67%)
Frame = +3
Query: 3 AIFGSVCKVCVAVSEDNIDXXXXXXXXXXAYMYVVAEAMIDAGVKMGLPRDVSNELVSQT 182
AIF +V V V V E+ +D AY+ ++ EA+ D GV GLPR ++ +L QT
Sbjct: 147 AIFSAVGNV-VEVPENLMDAVTGVSGSGPAYVALMIEALADGGVLAGLPRAIAQKLALQT 205
Query: 183 MIGAGKMIQLTKEHPMQLKDRVTSPGGTTIFGIAKLEELG 302
++G ++I+ T+EHP Q+KD+VTSPGGTTI G+A LE++G
Sbjct: 206 VLGTAELIKETEEHPAQIKDKVTSPGGTTIAGVAVLEKMG 245
>sp|Q04708|P5CR_PEA Pyrroline-5-carboxylate reductase (P5CR) (P5C reductase)
Length = 273
Score = 85.5 bits (210), Expect = 5e-17
Identities = 46/99 (46%), Positives = 62/99 (62%)
Frame = +3
Query: 6 IFGSVCKVCVAVSEDNIDXXXXXXXXXXAYMYVVAEAMIDAGVKMGLPRDVSNELVSQTM 185
+FGS+ K+ A + D AY+Y+ EA+ D GV GLPRD++ L SQT+
Sbjct: 156 LFGSIGKIWKA-DDKFFDAITGLSGSGPAYIYLAIEALADGGVAAGLPRDLALSLASQTV 214
Query: 186 IGAGKMIQLTKEHPMQLKDRVTSPGGTTIFGIAKLEELG 302
+GA M L+ +HP QLKD VTSPGGTTI G+ +LE+ G
Sbjct: 215 LGAASMATLSGKHPGQLKDDVTSPGGTTIAGVHELEKGG 253
>sp|P54904|P5CR1_ARATH Pyrroline-5-carboxylate reductase (P5CR) (P5C reductase)
Length = 276
Score = 80.9 bits (198), Expect = 1e-15
Identities = 43/97 (44%), Positives = 60/97 (61%)
Frame = +3
Query: 6 IFGSVCKVCVAVSEDNIDXXXXXXXXXXAYMYVVAEAMIDAGVKMGLPRDVSNELVSQTM 185
+FG+V K+ A E D AY+++ EA+ D GV GLPR+++ L SQT+
Sbjct: 157 LFGAVGKILKA-DEKMFDAVTGLSGSGPAYIFLAIEALADGGVAAGLpreLALSLASQTV 215
Query: 186 IGAGKMIQLTKEHPMQLKDRVTSPGGTTIFGIAKLEE 296
+GA M+ T +HP LKD VTSPGGTTI G+ +LE+
Sbjct: 216 LGAATMVSKTGKHPGVLKDDVTSPGGTTIAGVHELEK 252
>sp|Q96C36|P5CR2_HUMAN Pyrroline-5-carboxylate reductase 2 (P5CR 2) (P5C reductase 2)
Length = 320
Score = 79.3 bits (194), Expect = 4e-15
Identities = 40/91 (43%), Positives = 55/91 (60%)
Frame = +3
Query: 30 CVAVSEDNIDXXXXXXXXXXAYMYVVAEAMIDAGVKMGLPRDVSNELVSQTMIGAGKMIQ 209
C V ED ID AY ++ +A+ D GVKMGLPR ++ +L +Q ++GA KM+
Sbjct: 159 CTEVEEDLIDAVTGLSGSGPAYAFMALDALADGGVKMGLPRRLAIQLGAQALLGAAKMLL 218
Query: 210 LTKEHPMQLKDRVTSPGGTTIFGIAKLEELG 302
+++HP QLKD V SPGG TI + LE G
Sbjct: 219 DSEQHPCQLKDNVCSPGGATIHALHFLESGG 249
>sp|Q5RAQ3|P5CR2_PONPY Pyrroline-5-carboxylate reductase 2 (P5CR 2) (P5C reductase 2)
Length = 320
Score = 79.3 bits (194), Expect = 4e-15
Identities = 40/91 (43%), Positives = 55/91 (60%)
Frame = +3
Query: 30 CVAVSEDNIDXXXXXXXXXXAYMYVVAEAMIDAGVKMGLPRDVSNELVSQTMIGAGKMIQ 209
C V ED ID AY ++ +A+ D GVKMGLPR ++ +L +Q ++GA KM+
Sbjct: 159 CTEVEEDLIDAVTGLSGSGPAYAFMALDALADGGVKMGLPRRLAIQLGAQALLGAAKMLL 218
Query: 210 LTKEHPMQLKDRVTSPGGTTIFGIAKLEELG 302
+++HP QLKD V SPGG TI + LE G
Sbjct: 219 DSEQHPCQLKDNVCSPGGATIHALHFLESGG 249
>sp|Q922W5|P5CR1_MOUSE Pyrroline-5-carboxylate reductase 1 (P5CR 1) (P5C reductase 1)
Length = 309
Score = 79.0 bits (193), Expect = 5e-15
Identities = 43/99 (43%), Positives = 57/99 (57%)
Frame = +3
Query: 6 IFGSVCKVCVAVSEDNIDXXXXXXXXXXAYMYVVAEAMIDAGVKMGLPRDVSNELVSQTM 185
+ GSV C V ED ID AY + +A+ D GVKMGLPR ++ L +Q +
Sbjct: 152 LMGSV-GFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQAL 210
Query: 186 IGAGKMIQLTKEHPMQLKDRVTSPGGTTIFGIAKLEELG 302
+GA KM+ +++HP QLKD V SPGG TI + LE G
Sbjct: 211 LGAAKMLLDSEQHPSQLKDNVCSPGGATIHALHVLESGG 249
>sp|P32322|P5CR1_HUMAN Pyrroline-5-carboxylate reductase 1 (P5CR 1) (P5C reductase 1)
sp|Q5R9X6|P5CR1_PONPY Pyrroline-5-carboxylate reductase 1 (P5CR 1) (P5C reductase 1)
Length = 319
Score = 79.0 bits (193), Expect = 5e-15
Identities = 40/91 (43%), Positives = 54/91 (59%)
Frame = +3
Query: 30 CVAVSEDNIDXXXXXXXXXXAYMYVVAEAMIDAGVKMGLPRDVSNELVSQTMIGAGKMIQ 209
C V ED ID AY + +A+ D GVKMGLPR ++ L +Q ++GA KM+
Sbjct: 159 CTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLL 218
Query: 210 LTKEHPMQLKDRVTSPGGTTIFGIAKLEELG 302
+++HP QLKD V+SPGG TI + LE G
Sbjct: 219 HSEQHPGQLKDNVSSPGGATIHALHVLESGG 249
>sp|Q922Q4|P5CR2_MOUSE Pyrroline-5-carboxylate reductase 2 (P5CR 2) (P5C reductase 2)
Length = 320
Score = 76.6 bits (187), Expect = 2e-14
Identities = 39/91 (42%), Positives = 54/91 (59%)
Frame = +3
Query: 30 CVAVSEDNIDXXXXXXXXXXAYMYVVAEAMIDAGVKMGLPRDVSNELVSQTMIGAGKMIQ 209
C V ED ID AY ++ +A+ D GVKMG+PR ++ L +Q ++GA KM+
Sbjct: 159 CTEVEEDLIDAITGLSGSGPAYAFMALDALADGGVKMGVPRRLAVRLGAQALLGAAKMLL 218
Query: 210 LTKEHPMQLKDRVTSPGGTTIFGIAKLEELG 302
+++HP QLKD V SPGG TI + LE G
Sbjct: 219 DSEDHPGQLKDNVCSPGGATIHALHFLESGG 249
>sp|Q6AY23|P5CR2_RAT Pyrroline-5-carboxylate reductase 2 (P5CR 2) (P5C reductase 2)
Length = 320
Score = 76.6 bits (187), Expect = 2e-14
Identities = 39/91 (42%), Positives = 54/91 (59%)
Frame = +3
Query: 30 CVAVSEDNIDXXXXXXXXXXAYMYVVAEAMIDAGVKMGLPRDVSNELVSQTMIGAGKMIQ 209
C V ED ID AY ++ +A+ D GVKMG+PR ++ L +Q ++GA KM+
Sbjct: 159 CTEVEEDLIDAITGLSGSGPAYAFMALDALADGGVKMGVPRRLAVRLGAQALLGAAKMLL 218
Query: 210 LTKEHPMQLKDRVTSPGGTTIFGIAKLEELG 302
+++HP QLKD V SPGG TI + LE G
Sbjct: 219 DSEDHPGQLKDNVCSPGGATIHALHFLESGG 249
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,020,897
Number of Sequences: 369166
Number of extensions: 852296
Number of successful extensions: 1934
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1925
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2444192520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)