Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_M08
(251 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 101 5e-22
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 100 2e-21
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 100 2e-21
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 97 1e-20
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 95 6e-20
sp|P25784|CYSP3_HOMAM Digestive cysteine proteinase 3 precu... 94 7e-20
sp||P09648_1 [Segment 1 of 2] Cathepsin L [Contains: Cathep... 94 1e-19
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 92 4e-19
sp|Q10991|CATL_SHEEP Cathepsin L [Contains: Cathepsin L hea... 91 6e-19
sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine protei... 91 8e-19
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 101 bits (252), Expect = 5e-22
Identities = 45/63 (71%), Positives = 52/63 (82%)
Frame = +3
Query: 63 PASVDWRQKGYVTPVKNQQQCGSCWSFSSTGSLEGQYFRKNNRLINFS*QQLLECSGAYG 242
P SVDWR+KGYVTPVKNQ QCGSCW+FS+TG+LEGQ FRK RLI+ S Q L++CSG G
Sbjct: 115 PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQG 174
Query: 243 NYG 251
N G
Sbjct: 175 NEG 177
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 99.8 bits (247), Expect = 2e-21
Identities = 43/64 (67%), Positives = 53/64 (82%)
Frame = +3
Query: 60 LPASVDWRQKGYVTPVKNQQQCGSCWSFSSTGSLEGQYFRKNNRLINFS*QQLLECSGAY 239
LP SVDWR+KGYVTPVKNQ+QCGSCW+FS+TG+LEGQ FRK +L++ S Q L++CS
Sbjct: 114 LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQ 173
Query: 240 GNYG 251
GN G
Sbjct: 174 GNQG 177
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 99.8 bits (247), Expect = 2e-21
Identities = 43/64 (67%), Positives = 53/64 (82%)
Frame = +3
Query: 60 LPASVDWRQKGYVTPVKNQQQCGSCWSFSSTGSLEGQYFRKNNRLINFS*QQLLECSGAY 239
+P SVDWR+KGYVTPVKNQ QCGSCW+FS+TG+LEGQ FRK +L++ S Q L++CS A
Sbjct: 114 IPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQ 173
Query: 240 GNYG 251
GN G
Sbjct: 174 GNEG 177
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 97.1 bits (240), Expect = 1e-20
Identities = 42/64 (65%), Positives = 52/64 (81%)
Frame = +3
Query: 60 LPASVDWRQKGYVTPVKNQQQCGSCWSFSSTGSLEGQYFRKNNRLINFS*QQLLECSGAY 239
+P SVDW +KGYVTPVKNQ QCGSCW+FS+TG+LEGQ FRK +L++ S Q L++CS A
Sbjct: 114 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQ 173
Query: 240 GNYG 251
GN G
Sbjct: 174 GNQG 177
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 94.7 bits (234), Expect = 6e-20
Identities = 41/64 (64%), Positives = 51/64 (79%)
Frame = +3
Query: 60 LPASVDWRQKGYVTPVKNQQQCGSCWSFSSTGSLEGQYFRKNNRLINFS*QQLLECSGAY 239
+P SVDWR+KGYVT VKNQ QCGSCW+FS+TG+LEGQ FRK +L++ S Q L++CS
Sbjct: 114 VPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQ 173
Query: 240 GNYG 251
GN G
Sbjct: 174 GNQG 177
>sp|P25784|CYSP3_HOMAM Digestive cysteine proteinase 3 precursor
Length = 321
Score = 94.4 bits (233), Expect = 7e-20
Identities = 41/66 (62%), Positives = 53/66 (80%)
Frame = +3
Query: 54 GVLPASVDWRQKGYVTPVKNQQQCGSCWSFSSTGSLEGQYFRKNNRLINFS*QQLLECSG 233
G + A VDWR K VTPVK+Q+QCGSCW+FS+TG+LEGQ+F KN+ L++ S QQL++CS
Sbjct: 104 GPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCST 163
Query: 234 AYGNYG 251
YGN G
Sbjct: 164 DYGNDG 169
>sp||P09648_1 [Segment 1 of 2] Cathepsin L [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 176
Score = 94.0 bits (232), Expect = 1e-19
Identities = 40/63 (63%), Positives = 51/63 (80%)
Frame = +3
Query: 63 PASVDWRQKGYVTPVKNQQQCGSCWSFSSTGSLEGQYFRKNNRLINFS*QQLLECSGAYG 242
P SVDWR+KGYVTPVK+Q QCGSCW+FS+TG+LEGQ+FR +L++ S Q L++CS G
Sbjct: 2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEG 61
Query: 243 NYG 251
N G
Sbjct: 62 NQG 64
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 92.0 bits (227), Expect = 4e-19
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 60 LPASVDWRQKGYVTPVKNQQQCGSCWSFSSTGSLEGQYFRKNNRLINFS*QQLLECSGAY 239
+P SVDWR+KG VTPVKNQ QCGSCW+FS++G LEGQ F K +LI+ S Q L++CS A
Sbjct: 114 IPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQ 173
Query: 240 GNYG 251
GN G
Sbjct: 174 GNQG 177
>sp|Q10991|CATL_SHEEP Cathepsin L [Contains: Cathepsin L heavy chain; Cathepsin L light
chain]
Length = 217
Score = 91.3 bits (225), Expect = 6e-19
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = +3
Query: 60 LPASVDWRQKGYVTPVKNQQQCGSCWSFSSTGSLEGQYFRKNNRLINFS*QQLLECSGAY 239
+P SVDW +KGYVTPVKNQ QCGSCW+FS+TG+LEGQ FRK +L++ S Q L++ S
Sbjct: 1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRPQ 60
Query: 240 GNYG 251
GN G
Sbjct: 61 GNQG 64
>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
L heavy chain; Cathepsin L light chain]
Length = 341
Score = 90.9 bits (224), Expect = 8e-19
Identities = 41/64 (64%), Positives = 50/64 (78%)
Frame = +3
Query: 60 LPASVDWRQKGYVTPVKNQQQCGSCWSFSSTGSLEGQYFRKNNRLINFS*QQLLECSGAY 239
LP SVDWR KG VT VK+Q CGSCW+FSSTG+LEGQ+FRK+ L++ S Q L++CS Y
Sbjct: 124 LPKSVDWRTKGAVTAVKDQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKY 183
Query: 240 GNYG 251
GN G
Sbjct: 184 GNNG 187
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,860,205
Number of Sequences: 369166
Number of extensions: 497173
Number of successful extensions: 1442
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 68,354,980
effective HSP length: 54
effective length of database: 58,379,290
effective search space used: 1692999410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)