Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_L08
(811 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q02748|IF4A_DROME Eukaryotic initiation factor 4A (eIF4A... 378 e-104
sp|P60842|IF4A1_HUMAN Eukaryotic initiation factor 4A-I (eI... 377 e-104
sp|Q4R8K5|IF4A1_MACFA Eukaryotic initiation factor 4A-I (eI... 377 e-104
sp|P29562|IF4A1_RABIT Eukaryotic initiation factor 4A-I (eI... 377 e-104
sp|P47943|IF4A_SCHPO Eukaryotic initiation factor 4A (eIF4A... 373 e-103
sp|P10630|IF4A2_MOUSE Eukaryotic initiation factor 4A-II (e... 372 e-103
sp|Q5R5F5|IF4A1_PONPY Eukaryotic initiation factor 4A-I (eI... 372 e-103
sp|Q4R4Y9|IF4A2_MACFA Eukaryotic initiation factor 4A-II (e... 370 e-102
sp|P27639|IF4A_CAEEL Eukaryotic initiation factor 4A (eIF4A... 363 e-100
sp|Q40465|IF411_TOBAC Eukaryotic initiation factor 4A-11 (e... 353 2e-97
>sp|Q02748|IF4A_DROME Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 403
Score = 378 bits (970), Expect = e-104
Identities = 188/269 (69%), Positives = 225/269 (83%)
Frame = +1
Query: 4 MENPGEIETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQA 183
ME G IE+ + +V ++FDDMNL+E+LLRGIY YGFEKPSAIQQRA++P + G DVIAQA
Sbjct: 15 MEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQA 74
Query: 184 QSGTGKTATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIG 363
QSGTGKTATFS+AILQ+ID + E QAL+LAPTRELA QI +V++ALG+YM S+ACIG
Sbjct: 75 QSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIG 134
Query: 364 GTRVQEDVGNLENGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIH 543
GT V+ED LE+G HV+VGTPGRV DMI R L+T IK+FVLDEADEMLSRGFK+QI
Sbjct: 135 GTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQ 194
Query: 544 SVIQFIEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEED 723
V + + D Q++LLSATMPPDVLEV+R FMR PV ILVKKEELTLEGI+QFYVNV +E+
Sbjct: 195 DVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQEN 254
Query: 724 YKFETLTDLYETLTITQAVIFCNTRRKVD 810
+K TL DLY+TL+ITQ+VIFCNTRRKVD
Sbjct: 255 WKLGTLCDLYDTLSITQSVIFCNTRRKVD 283
>sp|P60842|IF4A1_HUMAN Eukaryotic initiation factor 4A-I (eIF4A-I) (eIF-4A-I)
sp|P60843|IF4A1_MOUSE Eukaryotic initiation factor 4A-I (eIF4A-I) (eIF-4A-I)
Length = 406
Score = 377 bits (968), Expect = e-104
Identities = 190/270 (70%), Positives = 226/270 (83%), Gaps = 1/270 (0%)
Frame = +1
Query: 4 MENPGEIETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQA 183
ME G IE+N+ ++ +SFDDMNL E LLRGIYAYGFEKPSAIQQRA+LP I+G+DVIAQA
Sbjct: 17 MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQA 76
Query: 184 QSGTGKTATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIG 363
QSGTGKTATF+++ILQ+I++ QALVLAPTRELA+QI KV++ALGDYMGA +ACIG
Sbjct: 77 QSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIG 136
Query: 364 GTRVQEDVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQI 540
GT V+ +V L+ H+IVGTPGRV DM+ R L IKMFVLDEADEMLSRGFK+QI
Sbjct: 137 GTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196
Query: 541 HSVIQFIEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEE 720
+ + Q + +TQ+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGIRQFY+NV E
Sbjct: 197 YDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVERE 256
Query: 721 DYKFETLTDLYETLTITQAVIFCNTRRKVD 810
++K +TL DLYETLTITQAVIF NTRRKVD
Sbjct: 257 EWKLDTLCDLYETLTITQAVIFINTRRKVD 286
>sp|Q4R8K5|IF4A1_MACFA Eukaryotic initiation factor 4A-I (eIF4A-I) (eIF-4A-I)
Length = 406
Score = 377 bits (968), Expect = e-104
Identities = 190/270 (70%), Positives = 226/270 (83%), Gaps = 1/270 (0%)
Frame = +1
Query: 4 MENPGEIETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQA 183
ME G IE+N+ ++ +SFDDMNL E LLRGIYAYGFEKPSAIQQRA+LP I+G+DVIAQA
Sbjct: 17 MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQA 76
Query: 184 QSGTGKTATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIG 363
QSGTGKTATF+++ILQ+I++ QALVLAPTRELA+QI KV++ALGDYMGA +ACIG
Sbjct: 77 QSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIG 136
Query: 364 GTRVQEDVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQI 540
GT V+ +V L+ H+IVGTPGRV DM+ R L IKMFVLDEADEMLSRGFK+QI
Sbjct: 137 GTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196
Query: 541 HSVIQFIEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEE 720
+ + Q + +TQ+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGIRQFY+NV E
Sbjct: 197 YDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVERE 256
Query: 721 DYKFETLTDLYETLTITQAVIFCNTRRKVD 810
++K +TL DLYETLTITQAVIF NTRRKVD
Sbjct: 257 EWKLDTLCDLYETLTITQAVIFINTRRKVD 286
>sp|P29562|IF4A1_RABIT Eukaryotic initiation factor 4A-I (eIF4A-I) (eIF-4A-I)
Length = 398
Score = 377 bits (968), Expect = e-104
Identities = 190/270 (70%), Positives = 226/270 (83%), Gaps = 1/270 (0%)
Frame = +1
Query: 4 MENPGEIETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQA 183
ME G IE+N+ ++ +SFDDMNL E LLRGIYAYGFEKPSAIQQRA+LP I+G+DVIAQA
Sbjct: 9 MEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQA 68
Query: 184 QSGTGKTATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIG 363
QSGTGKTATF+++ILQ+I++ QALVLAPTRELA+QI KV++ALGDYMGA +ACIG
Sbjct: 69 QSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIG 128
Query: 364 GTRVQEDVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQI 540
GT V+ +V L+ H+IVGTPGRV DM+ R L IKMFVLDEADEMLSRGFK+QI
Sbjct: 129 GTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 188
Query: 541 HSVIQFIEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEE 720
+ + Q + +TQ+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGIRQFY+NV E
Sbjct: 189 YDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVERE 248
Query: 721 DYKFETLTDLYETLTITQAVIFCNTRRKVD 810
++K +TL DLYETLTITQAVIF NTRRKVD
Sbjct: 249 EWKLDTLCDLYETLTITQAVIFINTRRKVD 278
>sp|P47943|IF4A_SCHPO Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 392
Score = 373 bits (958), Expect = e-103
Identities = 179/263 (68%), Positives = 227/263 (86%)
Frame = +1
Query: 22 IETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTGK 201
IETNY++V ++FDDMNLK +LLRGIYAYGFE+PSAIQQRA++P + DV+AQAQSGTGK
Sbjct: 10 IETNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGK 69
Query: 202 TATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQE 381
TATFS+++LQ+ID + + QAL+LAPTRELA+QI KV++ALGD M + +ACIGGT V++
Sbjct: 70 TATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRD 129
Query: 382 DVGNLENGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQFI 561
D+ L+ GVHV+VGTPGRV+DMI+R L T++++MFVLDEADEMLSRGFK+QI+ + Q +
Sbjct: 130 DMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLL 189
Query: 562 EHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFETL 741
Q+VLLSATMP DVLEVT KFMR P++ILVKK+ELTLEGI+QFYV V +E++K +TL
Sbjct: 190 PPTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTL 249
Query: 742 TDLYETLTITQAVIFCNTRRKVD 810
DLYET+T+TQAVIFCNTRRKVD
Sbjct: 250 CDLYETVTVTQAVIFCNTRRKVD 272
>sp|P10630|IF4A2_MOUSE Eukaryotic initiation factor 4A-II (eIF4A-II) (eIF-4A-II)
sp|Q14240|IF4A2_HUMAN Eukaryotic initiation factor 4A-II (eIF4A-II) (eIF-4A-II)
sp|Q5R4X1|IF4A2_PONPY Eukaryotic initiation factor 4A-II (eIF4A-II) (eIF-4A-II)
Length = 407
Score = 372 bits (956), Expect = e-103
Identities = 185/270 (68%), Positives = 226/270 (83%), Gaps = 1/270 (0%)
Frame = +1
Query: 4 MENPGEIETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQA 183
M+ G IE+N+ ++ ++FDDMNLKE LLRGIYAYGFEKPSAIQQRA++P I+G+DVIAQA
Sbjct: 18 MDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQA 77
Query: 184 QSGTGKTATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIG 363
QSGTGKTATF+++ILQ++++ E QALVLAPTRELA+QI KVI+ALGDYMGA +ACIG
Sbjct: 78 QSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIG 137
Query: 364 GTRVQEDVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQI 540
GT V+ ++ L+ H++VGTPGRV DM+ R L IKMFVLDEADEMLSRGFK+QI
Sbjct: 138 GTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQI 197
Query: 541 HSVIQFIEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEE 720
+ + Q + Q+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGI+QFY+NV E
Sbjct: 198 YEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVERE 257
Query: 721 DYKFETLTDLYETLTITQAVIFCNTRRKVD 810
++K +TL DLYETLTITQAVIF NTRRKVD
Sbjct: 258 EWKLDTLCDLYETLTITQAVIFLNTRRKVD 287
>sp|Q5R5F5|IF4A1_PONPY Eukaryotic initiation factor 4A-I (eIF4A-I) (eIF-4A-I)
Length = 406
Score = 372 bits (954), Expect = e-103
Identities = 188/270 (69%), Positives = 224/270 (82%), Gaps = 1/270 (0%)
Frame = +1
Query: 4 MENPGEIETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQA 183
ME G IE+N+ ++ +S DDMNL E LLRGIYAYGFEKPSAIQQRA+L I+G+DVIAQA
Sbjct: 17 MEPEGVIESNWNEIVDSLDDMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQA 76
Query: 184 QSGTGKTATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIG 363
QSGTGKTATF+++ILQ+I++ QALVLAPTRELA+QI KV++ALGDYMGA +ACIG
Sbjct: 77 QSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIG 136
Query: 364 GTRVQEDVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQI 540
GT V+ +V L+ H+IVGTPGRV DM+ R L IKMFVLDEADEMLSRGFK+QI
Sbjct: 137 GTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQI 196
Query: 541 HSVIQFIEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEE 720
+ + Q + +TQ+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGIRQFY+NV E
Sbjct: 197 YDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVERE 256
Query: 721 DYKFETLTDLYETLTITQAVIFCNTRRKVD 810
++K +TL DLYETLTITQAVIF NTRRKVD
Sbjct: 257 EWKLDTLCDLYETLTITQAVIFINTRRKVD 286
>sp|Q4R4Y9|IF4A2_MACFA Eukaryotic initiation factor 4A-II (eIF4A-II) (eIF-4A-II)
Length = 408
Score = 370 bits (949), Expect = e-102
Identities = 184/270 (68%), Positives = 225/270 (83%), Gaps = 1/270 (0%)
Frame = +1
Query: 4 MENPGEIETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQA 183
M+ G IE+N+ ++ ++FDDMNLKE LLRGIYAYGFEKPSAIQQRA++P I+G+DVIAQA
Sbjct: 19 MDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQA 78
Query: 184 QSGTGKTATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIG 363
QSGTGKTATF+++ILQ++++ E QALVLAPTRELA+QI KVI+ALGDYMGA +ACIG
Sbjct: 79 QSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIG 138
Query: 364 GTRVQEDVGNLE-NGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQI 540
GT V+ ++ L+ H++VGTPGRV DM+ R L IKMFVLDEAD MLSRGFK+QI
Sbjct: 139 GTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADGMLSRGFKDQI 198
Query: 541 HSVIQFIEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEE 720
+ + Q + Q+VLLSATMP DVLEVT+KFMR P++ILVKKEELTLEGI+QFY+NV E
Sbjct: 199 YEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVERE 258
Query: 721 DYKFETLTDLYETLTITQAVIFCNTRRKVD 810
++K +TL DLYETLTITQAVIF NTRRKVD
Sbjct: 259 EWKLDTLCDLYETLTITQAVIFLNTRRKVD 288
>sp|P27639|IF4A_CAEEL Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 402
Score = 363 bits (933), Expect = e-100
Identities = 180/265 (67%), Positives = 218/265 (82%)
Frame = +1
Query: 16 GEIETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGT 195
G IE NY++V ESFDDM LKE+LLRGIY +GFEKPSAIQ+RA++P G DVIAQAQSGT
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGT 77
Query: 196 GKTATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRV 375
GKTATFSV+ILQRID VQALV+APTRELA+QI KV+ ALG+Y+ CIGGT V
Sbjct: 78 GKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSV 137
Query: 376 QEDVGNLENGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQ 555
++D LE G+HV+VGTPGRV DMI R L T+ IKMFVLDEADEMLSRGFK+QI+ V +
Sbjct: 138 RDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFR 197
Query: 556 FIEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFE 735
+ D Q+VLLSATMP +VL+VT +FMR+P++ILVKK+ELTLEGIRQFY+NV ++++KF+
Sbjct: 198 SMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFD 257
Query: 736 TLTDLYETLTITQAVIFCNTRRKVD 810
L DLY + +TQAVIFCNTRRKVD
Sbjct: 258 CLCDLYNVVNVTQAVIFCNTRRKVD 282
>sp|Q40465|IF411_TOBAC Eukaryotic initiation factor 4A-11 (eIF4A-11) (eIF-4A-11)
Length = 413
Score = 353 bits (907), Expect = 2e-97
Identities = 177/264 (67%), Positives = 218/264 (82%)
Frame = +1
Query: 19 EIETNYEKVTESFDDMNLKEDLLRGIYAYGFEKPSAIQQRAVLPAIEGHDVIAQAQSGTG 198
E T+Y++V ESFD M L+E+LLRGIYAYGFEKPSAIQQR ++P +G DVI QAQSGTG
Sbjct: 30 EFFTSYDEVYESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTG 89
Query: 199 KTATFSVAILQRIDVTKNEVQALVLAPTRELAKQIHKVIIALGDYMGAKSYACIGGTRVQ 378
KTATF ILQ++D + E QALVLAPTRELA+QI KV+ ALGDY+G K +AC+GGT V+
Sbjct: 90 KTATFCSGILQQLDYSLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 149
Query: 379 EDVGNLENGVHVIVGTPGRVNDMIERGNLKTNSIKMFVLDEADEMLSRGFKEQIHSVIQF 558
ED L++GVHV+VGTPGRV DM+ R +L+ ++IKMFVLDEADEMLSRGFK+QI+ + Q
Sbjct: 150 EDQRILQSGVHVVVGTPGRVFDMLRRQSLRPDNIKMFVLDEADEMLSRGFKDQIYDIFQL 209
Query: 559 IEHDTQIVLLSATMPPDVLEVTRKFMRSPVKILVKKEELTLEGIRQFYVNVSEEDYKFET 738
+ Q+ + SATMPP+ LE+TRKFM PV+ILVK++ELTLEGI+QFYVNV +E++K ET
Sbjct: 210 LPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLET 269
Query: 739 LTDLYETLTITQAVIFCNTRRKVD 810
L DLYETL ITQ+VIF NTRRKVD
Sbjct: 270 LCDLYETLAITQSVIFVNTRRKVD 293
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,980,891
Number of Sequences: 369166
Number of extensions: 1895739
Number of successful extensions: 5305
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4959
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7715018400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)