Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_L03
(871 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9C3Z4|NOG2_PNECA Nucleolar GTP-binding protein 2 (Bindi... 215 1e-55
sp|Q6CSP9|NOG2_KLULA Nucleolar GTP-binding protein 2 213 4e-55
sp|Q13823|NOG2_HUMAN Nucleolar GTP-binding protein 2 (Autoa... 213 7e-55
sp|O14236|NOG2_SCHPO Nucleolar GTP-binding protein 2 210 4e-54
sp|Q99LH1|NOG2_MOUSE Nucleolar GTP-binding protein 2 210 5e-54
sp|Q6C036|NOG2_YARLI Nucleolar GTP-binding protein 2 206 9e-53
sp|Q75DA4|NOG2_ASHGO Nucleolar GTP-binding protein 2 204 3e-52
sp|P53742|NOG2_YEAST Nucleolar GTP-binding protein 2 201 2e-51
sp|Q6FWS1|NOG2_CANGA Nucleolar GTP-binding protein 2 199 6e-51
sp|Q8J109|NOG2_CRYNV Nucleolar GTP-binding protein 2 193 5e-49
>sp|Q9C3Z4|NOG2_PNECA Nucleolar GTP-binding protein 2 (Binding-inducible GTPase)
Length = 483
Score = 215 bits (547), Expect = 1e-55
Identities = 116/264 (43%), Positives = 167/264 (63%), Gaps = 8/264 (3%)
Frame = +1
Query: 1 KWFGNTRVISEKDLMKFQEY--QNTYDPFQVTLRKTVMPLSLNLHKTKKNKPNFKTLQPY 174
+WF NTRVIS+ L F+E + DP +V L++ +P+SL + TK K N ++P+
Sbjct: 65 RWFSNTRVISQDVLNMFRESFAEKLNDPCKVLLKQNKLPMSLLMEPTKTRKANIIDIEPF 124
Query: 175 ---FKRKITVKESNIKARTFEELSAQTKTALEEFNAKQSML-SIDDDKDEATHGVFRAGT 342
F +K K + + A + E LS + E + K S ++D + ++ +F GT
Sbjct: 125 DDTFGKKSXRKRAKLYASSIENLSNFAFESYENYIKKNSEYENVDKNIQKSFEAIFSKGT 184
Query: 343 SNRIWQEVYKVIDSSDVLLYVLDARNPMGMRSPKIELDIRNKQ--KKIIFVLNKVDLVPS 516
S RIW E+YK IDSSDV++ +LDARNP+G R +E ++ ++ K +I +LNK DL+P+
Sbjct: 185 SKRIWNELYKXIDSSDVIIQLLDARNPLGTRCKHVEEYLKKEKPHKHMILLLNKCDLIPT 244
Query: 517 GVTRHWEKLLNKEYPTIMFYADVKHPLGKDRLICLLRQFRDKMKDRRQISVGIIGFPNTG 696
TR W K L+KEYPT+ F+A + +P GK LI LLRQF +RRQISVG IG+PNTG
Sbjct: 245 WCTREWIKQLSKEYPTLAFHASINNPFGKGSLIQLLRQFSKLHSNRRQISVGFIGYPNTG 304
Query: 697 KSSLINTLKGEKVCKVAPSPGKQR 768
KSS+INTL+ +KVC AP PG+ +
Sbjct: 305 KSSVINTLRSKKVCNTAPIPGETK 328
Score = 40.4 bits (93), Expect = 0.006
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3
Query: 759 ETKVWQYISLMKSIDLIDCPGTVTSEKDEKLSETDLI 869
ETKVWQY+ + I +IDCPG V ++ SET++I
Sbjct: 326 ETKVWQYVRMTSKIFMIDCPGIVPPNSND--SETEII 360
>sp|Q6CSP9|NOG2_KLULA Nucleolar GTP-binding protein 2
Length = 513
Score = 213 bits (543), Expect = 4e-55
Identities = 126/275 (45%), Positives = 168/275 (61%), Gaps = 19/275 (6%)
Frame = +1
Query: 1 KWFGNTRVISEKDLMKFQEY--QNTYDPFQVTLRKTVMPLSLNLHKTKKNKPNFKTLQ-- 168
+WFGNTRVIS+ L F+E +N D +QV LR+ +P+SL K P K L+
Sbjct: 76 RWFGNTRVISQDSLSHFREALGENKRDSYQVLLRRNKLPMSLLNEKDSAESPTAKILETE 135
Query: 169 PY---FKRKITVKESNIKARTFEELSAQTKTALEEFNAKQ---SMLSIDDDKDE------ 312
P+ F K K+ I A + EEL + T T + F KQ S L + ++E
Sbjct: 136 PFEQTFGPKAQRKKPRIAASSLEELISSTSTDNKTFEEKQELDSTLGLMGKQEEEDGWTQ 195
Query: 313 -ATHGVFRAGTSNRIWQEVYKVIDSSDVLLYVLDARNPMGMRSPKIELDIRNK--QKKII 483
A +F G S RIW E+YKVIDSSDV+++VLDAR+P+G R + + N+ K +I
Sbjct: 196 AAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVTDYMTNETPHKHLI 255
Query: 484 FVLNKVDLVPSGVTRHWEKLLNKEYPTIMFYADVKHPLGKDRLICLLRQFRDKMKDRRQI 663
+VLNK DLVP+ V W K L+KE PT+ F+A + + GK LI LLRQF KDR QI
Sbjct: 256 YVLNKCDLVPTWVAAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHKDRHQI 315
Query: 664 SVGIIGFPNTGKSSLINTLKGEKVCKVAPSPGKQR 768
SVG IG+PNTGKSS+INTL+ +KVC+VAP PG+ +
Sbjct: 316 SVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETK 350
Score = 45.4 bits (106), Expect = 2e-04
Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 759 ETKVWQYISLMKSIDLIDCPGTV-TSEKDEKLSETDLI 869
ETKVWQYI+LMK I LIDCPG V S KD SE D++
Sbjct: 348 ETKVWQYITLMKRIFLIDCPGIVPPSSKD---SEEDIL 382
>sp|Q13823|NOG2_HUMAN Nucleolar GTP-binding protein 2 (Autoantigen NGP-1)
Length = 731
Score = 213 bits (541), Expect = 7e-55
Identities = 114/268 (42%), Positives = 170/268 (63%), Gaps = 12/268 (4%)
Frame = +1
Query: 1 KWFGNTRVISEKDLMKFQEYQNTY--DPFQVTLRKTVMPLSL-----NLHKTKKNKPNFK 159
KWFGNTRVI + L KFQE +T DP++V ++++ +P+SL H K + + +
Sbjct: 79 KWFGNTRVIKQSSLQKFQEEMDTVMKDPYKVVMKQSKLPMSLLHDRIRPHNLKVHILDTE 138
Query: 160 TLQPYFKRKITVKESNIKARTFEELSAQTKTALEEFNAKQSMLSIDDD---KDEATHGVF 330
+ + F K K N+ A + L + + E ++ + + +D ++EA ++
Sbjct: 139 SFETTFGPKSQRKRPNLFASDMQSLIENAEMSTESYDQGKDRDLVTEDTGVRNEAQEEIY 198
Query: 331 RAGTSNRIWQEVYKVIDSSDVLLYVLDARNPMGMRSPKIELDIRNKQ--KKIIFVLNKVD 504
+ G S RIW E+YKVIDSSDV++ VLDAR+PMG RSP IE ++ ++ K +IFVLNK D
Sbjct: 199 KKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCD 258
Query: 505 LVPSGVTRHWEKLLNKEYPTIMFYADVKHPLGKDRLICLLRQFRDKMKDRRQISVGIIGF 684
LVP+ T+ W +L+++YPT+ F+A + +P GK I LLRQF D++QISVG IG+
Sbjct: 259 LVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGY 318
Query: 685 PNTGKSSLINTLKGEKVCKVAPSPGKQR 768
PN GKSS+INTL+ +KVC VAP G+ +
Sbjct: 319 PNVGKSSVINTLRSKKVCNVAPIAGETK 346
Score = 48.1 bits (113), Expect = 3e-05
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +3
Query: 759 ETKVWQYISLMKSIDLIDCPGTVTSEKDEKLSETDLI 869
ETKVWQYI+LM+ I LIDCPG V +D SETD++
Sbjct: 344 ETKVWQYITLMRRIFLIDCPGVVYPSED---SETDIV 377
>sp|O14236|NOG2_SCHPO Nucleolar GTP-binding protein 2
Length = 537
Score = 210 bits (535), Expect = 4e-54
Identities = 120/269 (44%), Positives = 165/269 (61%), Gaps = 13/269 (4%)
Frame = +1
Query: 1 KWFGNTRVISEKDLMKFQEY--QNTYDPFQVTLRKTVMPLSLNLHKTKKNKPNFKTLQPY 174
+WF NTRVI++ L +F+E Q DP+QV LR+ +P+SL T+ K +P+
Sbjct: 78 RWFNNTRVIAQPTLTQFREAMGQKLNDPYQVLLRRNKLPMSLLQENTEIPKVRVLESEPF 137
Query: 175 ---FKRKITVKESNIKARTFEELSAQTKTALEEFNAK--QSMLSIDDDKDE----ATHGV 327
F K K I + EL+ ++ + K + +L+ D+ D+ A +
Sbjct: 138 ENTFGPKSQRKRPKISFDSVAELAKESDEKQNAYEEKIEERILANPDESDDVMLAARDAI 197
Query: 328 FRAGTSNRIWQEVYKVIDSSDVLLYVLDARNPMGMRSPKIELDIRNK--QKKIIFVLNKV 501
F G S RIW E+YKVIDSSDVL+ VLDAR+P+G R +E +RN+ K +I VLNKV
Sbjct: 198 FSKGQSKRIWNELYKVIDSSDVLIQVLDARDPVGTRCGTVERYLRNEASHKHMILVLNKV 257
Query: 502 DLVPSGVTRHWEKLLNKEYPTIMFYADVKHPLGKDRLICLLRQFRDKMKDRRQISVGIIG 681
DLVP+ V W K+L KEYPTI F+A + + GK LI +LRQF D++QISVG+IG
Sbjct: 258 DLVPTSVAAAWVKILAKEYPTIAFHASINNSFGKGSLIQILRQFASLHSDKKQISVGLIG 317
Query: 682 FPNTGKSSLINTLKGEKVCKVAPSPGKQR 768
FPN GKSS+INTL+ +KVC VAP PG+ +
Sbjct: 318 FPNAGKSSIINTLRKKKVCNVAPIPGETK 346
Score = 43.9 bits (102), Expect = 6e-04
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +3
Query: 759 ETKVWQYISLMKSIDLIDCPGTVTSEKDEKLSE 857
ETKVWQY++LMK I LIDCPG V ++ +E
Sbjct: 344 ETKVWQYVALMKRIFLIDCPGIVPPSSNDSDAE 376
>sp|Q99LH1|NOG2_MOUSE Nucleolar GTP-binding protein 2
Length = 728
Score = 210 bits (534), Expect = 5e-54
Identities = 115/268 (42%), Positives = 170/268 (63%), Gaps = 12/268 (4%)
Frame = +1
Query: 1 KWFGNTRVISEKDLMKFQEYQNTY--DPFQVTLRKTVMPLSL-----NLHKTKKNKPNFK 159
KWFGNTRVI + L KFQE + DP++V ++++ +P+SL H K + + +
Sbjct: 79 KWFGNTRVIKQASLQKFQEEMDKVMKDPYKVVMKQSKLPMSLLHDRIQPHNAKVHILDTE 138
Query: 160 TLQPYFKRKITVKESNIKARTFEELSAQTKTALEEFN-AKQSMLSIDDD--KDEATHGVF 330
+ + F K K N+ A + L + + E ++ K L ++D ++EA ++
Sbjct: 139 SFESTFGPKSQRKRPNLFASDMQSLLENAEMSTESYDQGKDRDLVMEDTGVRNEAQEEIY 198
Query: 331 RAGTSNRIWQEVYKVIDSSDVLLYVLDARNPMGMRSPKIELDIRNKQ--KKIIFVLNKVD 504
+ G S RIW E+YKVIDSSDV++ VLDAR+PMG RSP IE ++ ++ K +IFVLNK D
Sbjct: 199 KKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIEAYLKKEKPWKHLIFVLNKCD 258
Query: 505 LVPSGVTRHWEKLLNKEYPTIMFYADVKHPLGKDRLICLLRQFRDKMKDRRQISVGIIGF 684
LVP+ T+ W +L+++YPT+ F+A + +P GK I LLRQF D++QISVG IG+
Sbjct: 259 LVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGFIGY 318
Query: 685 PNTGKSSLINTLKGEKVCKVAPSPGKQR 768
PN GKSS+INTL+ +KVC VAP G+ +
Sbjct: 319 PNVGKSSVINTLRSKKVCNVAPIAGETK 346
Score = 48.1 bits (113), Expect = 3e-05
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +3
Query: 759 ETKVWQYISLMKSIDLIDCPGTVTSEKDEKLSETDLI 869
ETKVWQYI+LM+ I LIDCPG V +D SETD++
Sbjct: 344 ETKVWQYITLMRRIFLIDCPGVVYPSED---SETDIV 377
>sp|Q6C036|NOG2_YARLI Nucleolar GTP-binding protein 2
Length = 509
Score = 206 bits (523), Expect = 9e-53
Identities = 115/266 (43%), Positives = 163/266 (61%), Gaps = 10/266 (3%)
Frame = +1
Query: 1 KWFGNTRVISEKDLMKFQEY--QNTYDPFQVTLRKTVMPLSLNLHKTKKNKPNFKTLQPY 174
+WFGNTRVI++ L F+E + D +QV LR+ +P+SL K + + Y
Sbjct: 78 RWFGNTRVIAQDALNHFREALGETKRDSYQVLLRQNKLPMSLLEENNKIPQVKVVETESY 137
Query: 175 ---FKRKITVKESNIKARTFEELSAQTKTALEEFNAKQ---SMLSIDDDKDEATHGVFRA 336
F K K+ + F EL++ + ++F AK+ + +D EA +F
Sbjct: 138 ANTFGPKAQRKKPQLAVGDFAELASAADESQQDFEAKKEEDNSWKVDGWSQEAKEAIFHK 197
Query: 337 GTSNRIWQEVYKVIDSSDVLLYVLDARNPMGMRSPKIELDIRNK--QKKIIFVLNKVDLV 510
G S RIW E+YKVIDSSDV+++VLDAR+P+G R +E I+ + K +IFVLNK DLV
Sbjct: 198 GQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCTSVEQYIKKEAPHKHLIFVLNKCDLV 257
Query: 511 PSGVTRHWEKLLNKEYPTIMFYADVKHPLGKDRLICLLRQFRDKMKDRRQISVGIIGFPN 690
P+ V W K L+++YPT+ F+A + + GK LI LLRQ+ DR+QISVG IG+PN
Sbjct: 258 PTWVAAAWVKHLSQDYPTLAFHASITNSFGKGSLIQLLRQYSALHPDRQQISVGFIGYPN 317
Query: 691 TGKSSLINTLKGEKVCKVAPSPGKQR 768
TGKSS+INTL+ +KVCK AP PG+ +
Sbjct: 318 TGKSSIINTLRKKKVCKTAPIPGETK 343
Score = 48.5 bits (114), Expect = 2e-05
Identities = 26/38 (68%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +3
Query: 759 ETKVWQYISLMKSIDLIDCPGTV-TSEKDEKLSETDLI 869
ETKVWQYI+LMK I LIDCPG V S+KD SETD++
Sbjct: 341 ETKVWQYITLMKRIFLIDCPGIVPPSQKD---SETDIL 375
>sp|Q75DA4|NOG2_ASHGO Nucleolar GTP-binding protein 2
Length = 502
Score = 204 bits (519), Expect = 3e-52
Identities = 116/275 (42%), Positives = 166/275 (60%), Gaps = 19/275 (6%)
Frame = +1
Query: 1 KWFGNTRVISEKDLMKFQEY--QNTYDPFQVTLRKTVMPLSLNLHKTKKNKPNFKTL--Q 168
+WFGNTRVIS+ L F++ D +QV LR+ +P+SL K P K + +
Sbjct: 76 RWFGNTRVISQDALQHFRDALGDKKNDSYQVLLRRNKLPMSLLEEKDTSESPTAKIIDTE 135
Query: 169 PY---FKRKITVKESNIKARTFEELSAQTKTALEEFNAKQSMLSI----------DDDKD 309
PY F K K+ + A + E+L+ T + +++ K+ + S D
Sbjct: 136 PYGATFGPKAQRKKPRVAAASLEDLAKATDSDSQKYEEKKELDSTLGLMAATEQEDGWSQ 195
Query: 310 EATHGVFRAGTSNRIWQEVYKVIDSSDVLLYVLDARNPMGMRSPKIELDIRNK--QKKII 483
A +F G S RIW E+YKVIDSSDV+++VLDAR+P+G R +E ++ + K +I
Sbjct: 196 VAKEAIFHKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHLI 255
Query: 484 FVLNKVDLVPSGVTRHWEKLLNKEYPTIMFYADVKHPLGKDRLICLLRQFRDKMKDRRQI 663
+VLNK DLVP+ + W K L+K+ PT+ F+A + + GK LI LLRQF KDR+QI
Sbjct: 256 YVLNKCDLVPTWLAAAWVKHLSKDRPTLAFHASITNSFGKGSLIQLLRQFSQLHKDRQQI 315
Query: 664 SVGIIGFPNTGKSSLINTLKGEKVCKVAPSPGKQR 768
SVG IG+PNTGKSS+INTL+ +KVC+VAP PG+ +
Sbjct: 316 SVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETK 350
Score = 43.9 bits (102), Expect = 6e-04
Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 759 ETKVWQYISLMKSIDLIDCPGTV-TSEKDEKLSETDLI 869
ETKVWQYI+LMK I LIDCPG V S KD +E D++
Sbjct: 348 ETKVWQYITLMKRIFLIDCPGIVPPSAKD---TEEDIL 382
>sp|P53742|NOG2_YEAST Nucleolar GTP-binding protein 2
Length = 486
Score = 201 bits (511), Expect = 2e-51
Identities = 116/276 (42%), Positives = 161/276 (58%), Gaps = 20/276 (7%)
Frame = +1
Query: 1 KWFGNTRVISEKDLMKFQEY--QNTYDPFQVTLRKTVMPLSLNLHKTKKNKPNFKTLQPY 174
+WFGNTRVIS+ L F+ + D +QV LR+ +P+SL K P + L
Sbjct: 76 RWFGNTRVISQDALQHFRSALGETQKDTYQVLLRRNKLPMSLLEEKDADESPKARILDTE 135
Query: 175 -----FKRKITVKESNIKARTFEELSAQTKTALEEFNAKQ------SMLSIDDDKDE--- 312
F K K + A E+L T + ++ KQ ++ +DK+
Sbjct: 136 SYADAFGPKAQRKRPRLAASNLEDLVKATNEDITKYEEKQVLDATLGLMGNQEDKENGWT 195
Query: 313 --ATHGVFRAGTSNRIWQEVYKVIDSSDVLLYVLDARNPMGMRSPKIELDIRNK--QKKI 480
A +F G S RIW E+YKVIDSSDV+++VLDAR+P+G R +E ++ + K +
Sbjct: 196 SAAKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHL 255
Query: 481 IFVLNKVDLVPSGVTRHWEKLLNKEYPTIMFYADVKHPLGKDRLICLLRQFRDKMKDRRQ 660
I+VLNK DLVP+ V W K L+KE PT+ F+A + + GK LI LLRQF DR+Q
Sbjct: 256 IYVLNKCDLVPTWVAAAWVKHLSKERPTLAFHASITNSFGKGSLIQLLRQFSQLHTDRKQ 315
Query: 661 ISVGIIGFPNTGKSSLINTLKGEKVCKVAPSPGKQR 768
ISVG IG+PNTGKSS+INTL+ +KVC+VAP PG+ +
Sbjct: 316 ISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETK 351
Score = 45.4 bits (106), Expect = 2e-04
Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 759 ETKVWQYISLMKSIDLIDCPGTV-TSEKDEKLSETDLI 869
ETKVWQYI+LMK I LIDCPG V S KD SE D++
Sbjct: 349 ETKVWQYITLMKRIFLIDCPGIVPPSSKD---SEEDIL 383
>sp|Q6FWS1|NOG2_CANGA Nucleolar GTP-binding protein 2
Length = 494
Score = 199 bits (507), Expect = 6e-51
Identities = 115/276 (41%), Positives = 163/276 (59%), Gaps = 20/276 (7%)
Frame = +1
Query: 1 KWFGNTRVISEKDLMKFQEY--QNTYDPFQVTLRKTVMPLSLNLHKTKKNKPNFKTLQPY 174
+WFGNTRVIS+ L F++ + D +QV LR+ +P+SL K P + L+
Sbjct: 76 RWFGNTRVISQDALQHFRDALGETQKDTYQVLLRRNKLPMSLLDEKDSTESPRARILETE 135
Query: 175 -----FKRKITVKESNIKARTFEELSAQTKTA------LEEFNAKQSMLSIDDDKDEA-- 315
F K K+ + A + EEL T+ EE A ++ +D++
Sbjct: 136 SFDQTFGPKAQRKKPRVAASSLEELVQATEEENKTYEEKEELKATLGLMGKQEDEENGWT 195
Query: 316 ---THGVFRAGTSNRIWQEVYKVIDSSDVLLYVLDARNPMGMRSPKIELDIRNK--QKKI 480
+F G S RIW E+YKVIDSSDV+++VLDAR+P+G R +E ++ + K +
Sbjct: 196 QVTKEAIFSKGQSKRIWNELYKVIDSSDVVIHVLDARDPLGTRCKSVEEYMKKETPHKHL 255
Query: 481 IFVLNKVDLVPSGVTRHWEKLLNKEYPTIMFYADVKHPLGKDRLICLLRQFRDKMKDRRQ 660
I+VLNK DLVP+ V W K L+K+ PT+ F+A + + GK LI LLRQF DR+Q
Sbjct: 256 IYVLNKCDLVPTWVAAAWVKHLSKDRPTLAFHASITNSFGKGSLIQLLRQFSQLHTDRKQ 315
Query: 661 ISVGIIGFPNTGKSSLINTLKGEKVCKVAPSPGKQR 768
ISVG IG+PNTGKSS+INTL+ +KVC+VAP PG+ +
Sbjct: 316 ISVGFIGYPNTGKSSIINTLRKKKVCQVAPIPGETK 351
Score = 45.1 bits (105), Expect = 3e-04
Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 759 ETKVWQYISLMKSIDLIDCPGTV-TSEKDEKLSETDLI 869
ETKVWQYI+LMK I LIDCPG V S KD SE D++
Sbjct: 349 ETKVWQYITLMKRIFLIDCPGIVPPSTKD---SEEDIL 383
>sp|Q8J109|NOG2_CRYNV Nucleolar GTP-binding protein 2
Length = 720
Score = 193 bits (491), Expect = 5e-49
Identities = 115/277 (41%), Positives = 162/277 (58%), Gaps = 21/277 (7%)
Frame = +1
Query: 1 KWFGNTRVISEKDLMKFQEY--QNTYDPFQVTLRKTVMPLSLNLHKTKKN--KPNFKTLQ 168
+WFGNTRVIS+ L F+ + DP+ V L++ +P+ L TK +P+ +
Sbjct: 88 RWFGNTRVISQSALDHFRTALKEQKADPYSVLLKRNKLPMGLLQDDTKDGGRRPHIVETE 147
Query: 169 PY---FKRKITVKESNIKARTFEEL-----------SAQTKTALEEFNAKQSMLSI-DDD 303
P+ F K K + + EEL +A+T TA + N + I
Sbjct: 148 PFGNTFGPKAQRKRPRLDIGSIEELGESSAASAAAAAAETATAESQGNGTADLADIYHPT 207
Query: 304 KDEATHGVFRAGTSNRIWQEVYKVIDSSDVLLYVLDARNPMGMRSPKIELDIRNKQ--KK 477
A ++ GTS RIW E+YKV+DSSDV+++VLDAR+P+G R + +R ++ K
Sbjct: 208 TSTAREPIYAKGTSRRIWGELYKVLDSSDVVIHVLDARDPLGTRCKPVVEYLRKEKAHKH 267
Query: 478 IIFVLNKVDLVPSGVTRHWEKLLNKEYPTIMFYADVKHPLGKDRLICLLRQFRDKMKDRR 657
+++VLNKVDLVP+ VT W K L+ PTI F+A + + GK LI LLRQF D++
Sbjct: 268 LVYVLNKVDLVPTWVTARWVKHLSLSAPTIAFHASINNSFGKGSLIQLLRQFSVLHSDKK 327
Query: 658 QISVGIIGFPNTGKSSLINTLKGEKVCKVAPSPGKQR 768
QISVG IG+PNTGKSS+INTLK +KVC VAP PG+ +
Sbjct: 328 QISVGFIGYPNTGKSSIINTLKKKKVCTVAPIPGETK 364
Score = 44.7 bits (104), Expect = 3e-04
Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 759 ETKVWQYISLMKSIDLIDCPGTV-TSEKDEKLSETDLI 869
ETKVWQYI+LM+ I LIDCPG V S KD S+TD +
Sbjct: 362 ETKVWQYITLMRRIYLIDCPGIVPVSAKD---SDTDTV 396
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,984,471
Number of Sequences: 369166
Number of extensions: 2074333
Number of successful extensions: 7229
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7129
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8598109270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)