Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_K21
(622 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammon... 332 4e-91
sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammon... 332 5e-91
sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia... 332 5e-91
sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammon... 331 8e-91
sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammon... 330 2e-90
sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammon... 330 2e-90
sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammon... 329 3e-90
sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammon... 328 5e-90
sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammon... 325 4e-89
sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia... 324 1e-88
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 332 bits (852), Expect = 4e-91
Identities = 147/207 (71%), Positives = 172/207 (83%)
Frame = +1
Query: 1 SCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDI 180
+C+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG +K +GRDI
Sbjct: 116 TCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDI 175
Query: 181 IEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVV 360
+EAHY+ACL+AGIKIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+
Sbjct: 176 VEAHYRACLYAGIKIAGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVI 235
Query: 361 VSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 540
+FDPKPI G+WNGAG HTN+ST MR G+KYIEE+IEK+SKRH HI AYDP G D
Sbjct: 236 ATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEESIEKLSKRHQYHIRAYDPKGGLD 295
Query: 541 NRRRLTGRHETSTIDDFSSGVANRGAS 621
N RRLTG HETS I+DFS+GVANRGAS
Sbjct: 296 NARRLTGFHETSNINDFSAGVANRGAS 322
>sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammonia ligase)
Length = 361
Score = 332 bits (851), Expect = 5e-91
Identities = 149/206 (72%), Positives = 171/206 (83%)
Frame = +1
Query: 4 CEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDII 183
C E M A D HPWFG+EQEYTLLDID +P WPK G+PG QGPYYCGVG N+V+GRD++
Sbjct: 114 CMEVMTRAADQHPWFGMEQEYTLLDIDKHPLGWPKNGYPGPQGPYYCGVGANRVYGRDVV 173
Query: 184 EAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVV 363
EAHY+ACL AGI I+G NA+VMPAQWEFQ+GPCEGI + D LWMARYLLHRVAEDF VVV
Sbjct: 174 EAHYRACLCAGINISGENAKVMPAQWEFQVGPCEGITMGDDLWMARYLLHRVAEDFDVVV 233
Query: 364 SFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDN 543
+ DPKPI GDWNGAG HTN+ST MR P GI IE AI+K+SK H +HI+AYDPH G+DN
Sbjct: 234 TLDPKPIPGDWNGAGMHTNFSTEAMRGPNGILEIESAIDKLSKVHEKHIKAYDPHAGKDN 293
Query: 544 RRRLTGRHETSTIDDFSSGVANRGAS 621
RRLTG +ETS+I DFS+GVANRGAS
Sbjct: 294 ERRLTGHYETSSIHDFSAGVANRGAS 319
>sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 332 bits (851), Expect = 5e-91
Identities = 147/207 (71%), Positives = 171/207 (82%)
Frame = +1
Query: 1 SCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDI 180
+C+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG +K +GRDI
Sbjct: 116 TCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDI 175
Query: 181 IEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVV 360
+EAHY+ACL+AGIKI GTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+
Sbjct: 176 VEAHYRACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVI 235
Query: 361 VSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 540
+FDPKPI G+WNGAG HTN+ST MR G+KYIEEAIEK+SKRH HI AYDP G D
Sbjct: 236 ATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLD 295
Query: 541 NRRRLTGRHETSTIDDFSSGVANRGAS 621
N RRLTG HETS I+DFS+GVANRGAS
Sbjct: 296 NTRRLTGFHETSNINDFSAGVANRGAS 322
>sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 331 bits (849), Expect = 8e-91
Identities = 146/207 (70%), Positives = 170/207 (82%)
Frame = +1
Query: 1 SCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDI 180
SC+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG +K +GRDI
Sbjct: 116 SCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDI 175
Query: 181 IEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVV 360
+EAHY+ACL+AG+KI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+
Sbjct: 176 VEAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVI 235
Query: 361 VSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 540
+FDPKPI G+WNGAG HTN+ST MR G+KYIEEAI+K+SKRH HI AYDP G D
Sbjct: 236 ATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIDKLSKRHQYHIRAYDPKGGLD 295
Query: 541 NRRRLTGRHETSTIDDFSSGVANRGAS 621
N RRLTG HETS I+DFS+GVANRGAS
Sbjct: 296 NARRLTGFHETSNINDFSAGVANRGAS 322
>sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 330 bits (845), Expect = 2e-90
Identities = 145/207 (70%), Positives = 171/207 (82%)
Frame = +1
Query: 1 SCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDI 180
+C+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG ++ +GRDI
Sbjct: 116 TCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRDI 175
Query: 181 IEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVV 360
+EAHY+ACL+AG+KIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+
Sbjct: 176 VEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVI 235
Query: 361 VSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 540
+FDPKPI G+WNGAG HTN+ST MR G+KYIEEAIEK+SKRH HI AYDP G D
Sbjct: 236 ATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLD 295
Query: 541 NRRRLTGRHETSTIDDFSSGVANRGAS 621
N RRLTG HETS I+DFS+GVANR AS
Sbjct: 296 NARRLTGFHETSNINDFSAGVANRSAS 322
>sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 374
Score = 330 bits (845), Expect = 2e-90
Identities = 145/207 (70%), Positives = 171/207 (82%)
Frame = +1
Query: 1 SCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDI 180
+C+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG ++ +GRDI
Sbjct: 117 TCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRDI 176
Query: 181 IEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVV 360
+EAHY+ACL+AG+KIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+
Sbjct: 177 VEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVI 236
Query: 361 VSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 540
+FDPKPI G+WNGAG HTN+ST MR G+KYIEEAIEK+SKRH HI AYDP G D
Sbjct: 237 ATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLD 296
Query: 541 NRRRLTGRHETSTIDDFSSGVANRGAS 621
N RRLTG HETS I+DFS+GVANR AS
Sbjct: 297 NARRLTGFHETSNINDFSAGVANRSAS 323
>sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 329 bits (844), Expect = 3e-90
Identities = 146/207 (70%), Positives = 170/207 (82%)
Frame = +1
Query: 1 SCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDI 180
+C M + HPWFG+EQEYTLL D +PF WP FPG QGPYYCGVG +K +GRDI
Sbjct: 116 TCRRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADKAYGRDI 175
Query: 181 IEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVV 360
+EAHY+ACL+AG+KI GTNAEVMPAQWEFQ+GPCEGI + DHLW+AR++LHRV EDFGV+
Sbjct: 176 VEAHYRACLYAGVKIGGTNAEVMPAQWEFQVGPCEGIEMGDHLWIARFILHRVCEDFGVI 235
Query: 361 VSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 540
VSFDPKPI G+WNGAG HTN+ST MR GG+K+IEEAIEK+SKRH HI AYDP G D
Sbjct: 236 VSFDPKPIPGNWNGAGCHTNFSTKNMREDGGLKHIEEAIEKLSKRHQYHIRAYDPKGGLD 295
Query: 541 NRRRLTGRHETSTIDDFSSGVANRGAS 621
N RRLTG HETS+I +FS+GVANRGAS
Sbjct: 296 NARRLTGFHETSSIHEFSAGVANRGAS 322
>sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammonia ligase)
Length = 392
Score = 328 bits (842), Expect = 5e-90
Identities = 142/207 (68%), Positives = 176/207 (85%)
Frame = +1
Query: 1 SCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDI 180
+C++ M+ D+ PWFG+EQEYTLL I+ +P+ WP+ GFPG QGPYYCGVG +KV+GRD+
Sbjct: 116 TCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGADKVYGRDV 175
Query: 181 IEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVV 360
+E+HYKACL+AGIKI GTNAEVMP+QWEFQ+GPCEGI++ DHLWMAR++LHRV EDFGVV
Sbjct: 176 VESHYKACLYAGIKICGTNAEVMPSQWEFQVGPCEGIDMGDHLWMARFILHRVCEDFGVV 235
Query: 361 VSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 540
+ DPKP+ G+WNGAG HTNYST MR GG+K+IE+AIEK+ KRH HI YDP G+D
Sbjct: 236 ATLDPKPMTGNWNGAGCHTNYSTESMRVEGGLKHIEDAIEKLGKRHDYHICVYDPRGGKD 295
Query: 541 NRRRLTGRHETSTIDDFSSGVANRGAS 621
N RRLTG+HETS+I +FS+GVANRGAS
Sbjct: 296 NSRRLTGQHETSSIHEFSAGVANRGAS 322
>sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 325 bits (834), Expect = 4e-89
Identities = 143/206 (69%), Positives = 168/206 (81%)
Frame = +1
Query: 4 CEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDII 183
C+ M + HPWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG +K +GRDI+
Sbjct: 117 CKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIV 176
Query: 184 EAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVV 363
EAHY+ACL+AG+KI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+
Sbjct: 177 EAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWIARFILHRVCEDFGVIA 236
Query: 364 SFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGEDN 543
+FDPKPI G+WNGAG HTN+ST MR G+K+IEEAI+K+SKRH HI AYDP G DN
Sbjct: 237 TFDPKPIPGNWNGAGCHTNFSTKAMREENGLKWIEEAIDKLSKRHQYHIRAYDPKGGLDN 296
Query: 544 RRRLTGRHETSTIDDFSSGVANRGAS 621
R LTG HETS I+DFS+GVANRGAS
Sbjct: 297 ARALTGFHETSNINDFSAGVANRGAS 322
>sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 324 bits (831), Expect = 1e-88
Identities = 144/207 (69%), Positives = 167/207 (80%)
Frame = +1
Query: 1 SCEEAMKAAEDYHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDI 180
SC+ M HPWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG +K +GRDI
Sbjct: 116 SCKRIMDMVSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDI 175
Query: 181 IEAHYKACLFAGIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVV 360
+EAHY+ACL+AGIKI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+
Sbjct: 176 VEAHYRACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVI 235
Query: 361 VSFDPKPIAGDWNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 540
+FDPKPI G+WNGAG HTN+ST MR G++ IEEAI+K+SKRH HI AYDP G D
Sbjct: 236 ATFDPKPIPGNWNGAGCHTNFSTKAMREENGLRCIEEAIDKLSKRHQYHIRAYDPKGGLD 295
Query: 541 NRRRLTGRHETSTIDDFSSGVANRGAS 621
N RRLTG HETS I+DFS+GVANR AS
Sbjct: 296 NARRLTGFHETSNINDFSAGVANRSAS 322
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,460,027
Number of Sequences: 369166
Number of extensions: 1596237
Number of successful extensions: 4780
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4653
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 4877307000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)