Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_J18
(869 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P60891|PRPS1_HUMAN Ribose-phosphate pyrophosphokinase I ... 288 2e-77
sp|Q9D7G0|PRPS1_MOUSE Ribose-phosphate pyrophosphokinase I ... 287 2e-77
sp|Q4R4R7|PRPS2_MACFA Ribose-phosphate pyrophosphokinase II... 287 3e-77
sp|P09330|PRPS2_RAT Ribose-phosphate pyrophosphokinase II (... 287 3e-77
sp|Q9CS42|PRPS2_MOUSE Ribose-phosphate pyrophosphokinase II... 286 4e-77
sp|P21108|PRPS3_HUMAN Ribose-phosphate pyrophosphokinase II... 280 4e-75
sp|P38620|KPR2_YEAST Ribose-phosphate pyrophosphokinase 2 (... 231 2e-60
sp|P38063|KPR4_YEAST Probable ribose-phosphate pyrophosphok... 231 3e-60
sp|P38689|KPR3_YEAST Ribose-phosphate pyrophosphokinase 3 (... 226 8e-59
sp|P46585|KPR1_CANAL Ribose-phosphate pyrophosphokinase 1 (... 221 2e-57
>sp|P60891|PRPS1_HUMAN Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I) (PPRibP)
sp|P60892|PRPS1_RAT Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I)
Length = 318
Score = 288 bits (736), Expect = 2e-77
Identities = 143/282 (50%), Positives = 208/282 (73%), Gaps = 2/282 (0%)
Frame = +3
Query: 3 RLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVN 182
++FSGSS+ L++KI +R+G++L + + KFSN ET V+I ESVRG+DV+I+QSG ++N
Sbjct: 5 KIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEIN 64
Query: 183 NHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHI 362
++LMELLIMINACK AS++R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+HI
Sbjct: 65 DNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHI 124
Query: 363 ITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANT 542
ITMDLHASQIQGFF++PVDNL +E + WI++NIS+W TI S + A+RV ++A+
Sbjct: 125 ITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADR 184
Query: 543 LKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGV 716
L V F LI+ E+K+A+E +++LVGDV R+A+++ D+ D C + + +L GA V
Sbjct: 185 LNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRV 244
Query: 717 YVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDK 842
Y I THG+ S + ++++ +VVTNTI QE +K K
Sbjct: 245 YAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSK 286
>sp|Q9D7G0|PRPS1_MOUSE Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I)
Length = 318
Score = 287 bits (735), Expect = 2e-77
Identities = 143/282 (50%), Positives = 207/282 (73%), Gaps = 2/282 (0%)
Frame = +3
Query: 3 RLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVN 182
++FSGSS+ L++KI +R+G++L + + KFSN ET V+I ESVRG+DV+I+QSG ++N
Sbjct: 5 KIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGEIN 64
Query: 183 NHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHI 362
++LMELLIMINACK AS++R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+HI
Sbjct: 65 DNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHI 124
Query: 363 ITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANT 542
ITMDLHASQIQGFF++PVDNL +E + WI++NIS+W TI S + A+RV ++A
Sbjct: 125 ITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIAER 184
Query: 543 LKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGV 716
L V F LI+ E+K+A+E +++LVGDV R+A+++ D+ D C + + +L GA V
Sbjct: 185 LNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATRV 244
Query: 717 YVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDK 842
Y I THG+ S + ++++ +VVTNTI QE +K K
Sbjct: 245 YAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSK 286
>sp|Q4R4R7|PRPS2_MACFA Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
sp|P11908|PRPS2_HUMAN Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II) (PPRibP)
Length = 318
Score = 287 bits (734), Expect = 3e-77
Identities = 142/281 (50%), Positives = 208/281 (74%), Gaps = 2/281 (0%)
Frame = +3
Query: 6 LFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVNN 185
LFSGSS+ L++++ +R+G++L + + KFSN ETSV+I ESVRG+DV+I+QSG ++N+
Sbjct: 6 LFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEIND 65
Query: 186 HLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHII 365
+LMELLIMINACK ASS+R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+HII
Sbjct: 66 NLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHII 125
Query: 366 TMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTL 545
TMDLHASQIQGFF++PVDNL +E + WI++NI++W+ I S + A+RV ++A+ L
Sbjct: 126 TMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTSIADRL 185
Query: 546 KVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVY 719
V F LI+ E+K+A+E +++LVGDV R+A+++ D+ D C + + +L GA VY
Sbjct: 186 NVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVY 245
Query: 720 VIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDK 842
I THG+ S + ++++ +VVTNTI QE +K K
Sbjct: 246 AILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTK 286
>sp|P09330|PRPS2_RAT Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
Length = 318
Score = 287 bits (734), Expect = 3e-77
Identities = 142/281 (50%), Positives = 207/281 (73%), Gaps = 2/281 (0%)
Frame = +3
Query: 6 LFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVNN 185
LFSGSS+ L++++ +R+G++L + + KFSN ETSV+I ESVRG+DV+I+QSG ++N+
Sbjct: 6 LFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEIND 65
Query: 186 HLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHII 365
+LMELLIMINACK ASS+R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+HII
Sbjct: 66 NLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHII 125
Query: 366 TMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTL 545
TMDLHASQIQGFF++PVDNL +E + WI++NI++W I S + A+RV ++A+ L
Sbjct: 126 TMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENITEWRNCIIVSPDAGGAKRVTSIADRL 185
Query: 546 KVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVY 719
V F LI+ E+K+A+E +++LVGDV R+A+++ D+ D C + + +L GA VY
Sbjct: 186 NVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVY 245
Query: 720 VIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDK 842
I THG+ S + ++++ +VVTNTI QE +K K
Sbjct: 246 AILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSK 286
>sp|Q9CS42|PRPS2_MOUSE Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
Length = 318
Score = 286 bits (733), Expect = 4e-77
Identities = 142/281 (50%), Positives = 206/281 (73%), Gaps = 2/281 (0%)
Frame = +3
Query: 6 LFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVNN 185
LFSGSS+ L++++ +R+G++L + + KFSN ETSV+I ESVRG+DV+I+QSG ++N+
Sbjct: 6 LFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGEIND 65
Query: 186 HLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHII 365
+LMELLIMINACK ASS+R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+HII
Sbjct: 66 NLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHII 125
Query: 366 TMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTL 545
TMDLHASQIQGFF++PVDNL +E + WI++NI++W I S + A+RV ++A+ L
Sbjct: 126 TMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENITEWRNCIIVSPDAGGAKRVTSIADRL 185
Query: 546 KVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVY 719
V F LI+ E+K+A+E +++LVGDV R+A+++ D+ D C + + +L GA VY
Sbjct: 186 NVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVY 245
Query: 720 VIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDK 842
I THG+ S + ++ + +VVTNTI QE +K K
Sbjct: 246 AILTHGIFSGPAISRINSAAFEAVVVTNTIPQEDKMKHCSK 286
>sp|P21108|PRPS3_HUMAN Ribose-phosphate pyrophosphokinase III (Phosphoribosyl
pyrophosphate synthetase III) (PRS-III) (Phosphoribosyl
pyrophosphate synthetase 1-like 1)
Length = 318
Score = 280 bits (716), Expect = 4e-75
Identities = 142/282 (50%), Positives = 205/282 (72%), Gaps = 2/282 (0%)
Frame = +3
Query: 3 RLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYIDVN 182
++FSGSS+ L++KI +R+G++L + + KFSN ET V+I ESVRG+DV+I+QSG ++N
Sbjct: 5 KIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGCGEIN 64
Query: 183 NHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHI 362
+ LMELLIMINACK AS++R+TAV+P PY+RQ KKD +R PI+AKLVA++L IAGA+HI
Sbjct: 65 DSLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRSPISAKLVANMLSIAGADHI 124
Query: 363 ITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANT 542
ITMDLHASQIQGFF++PVDNL +E + WI++NI +W+ I S + A+RV ++A+
Sbjct: 125 ITMDLHASQIQGFFDIPVDNLYAEPTVLKWIRENIPEWKNCIIVSPDAGGAKRVTSIADQ 184
Query: 543 LKVRFGLIYVEKKEASEQ--IILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGV 716
L V F LI+ E+K+A+E I+LVGDV R+A+++ D+ D C + + +L GA V
Sbjct: 185 LNVDFALIHKERKKANEVDCIVLVGDVNDRVAILVDDMADTCVTICLAADKLLSAGATRV 244
Query: 717 YVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDK 842
Y I THG+ S + ++ + +VVTNTI Q++ +K K
Sbjct: 245 YAILTHGIFSGPAISRINTACFEAVVVTNTIPQDEKMKHCSK 286
>sp|P38620|KPR2_YEAST Ribose-phosphate pyrophosphokinase 2 (Phosphoribosyl pyrophosphate
synthetase 2)
Length = 318
Score = 231 bits (590), Expect = 2e-60
Identities = 121/273 (44%), Positives = 191/273 (69%), Gaps = 4/273 (1%)
Frame = +3
Query: 3 RLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGY--ID 176
+L +G+S+ L E I +R+G+ LS+ + ++SN ETSV I ES+R +DV+I+Q+GY +
Sbjct: 7 KLLAGNSHPGLAELISQRLGVPLSKVGVYQYSNKETSVTIGESIRDEDVYIIQTGYGEHE 66
Query: 177 VNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGAN 356
+N+ LMELLI+I+ACK AS RITAV+P PY+RQ KKD +R PITAKL+A+LL AG +
Sbjct: 67 INDFLMELLILIHACKTASVRRITAVIPNFPYARQDKKDKSRAPITAKLIANLLETAGCD 126
Query: 357 HIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMA 536
H+ITMDLHASQIQGFF++PVDNL E +++I+ + + + S + A+RVA++A
Sbjct: 127 HVITMDLHASQIQGFFHIPVDNLYGEPSVLNYIRTK-TDFNNAILVSPDAGGAKRVASLA 185
Query: 537 NTLKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAA 710
+ L + F LI+ E+++A+E +++LVGDV + +++ D+ D C ++ + L + GA
Sbjct: 186 DKLDMNFALIHKERQKANEVSRMLLVGDVAGKSCLLIDDMADTCGTLVKACDTLMDHGAK 245
Query: 711 GVYVIATHGMLSERLMKEVDDSIITKLVVTNTI 809
V I THG+ S +++ +S ++++V TNT+
Sbjct: 246 EVIAIVTHGIFSGSAREKLINSRLSRIVCTNTV 278
>sp|P38063|KPR4_YEAST Probable ribose-phosphate pyrophosphokinase 4 (Phosphoribosyl
pyrophosphate synthetase 4)
Length = 355
Score = 231 bits (588), Expect = 3e-60
Identities = 120/273 (43%), Positives = 194/273 (71%), Gaps = 4/273 (1%)
Frame = +3
Query: 3 RLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGY--ID 176
+L +G+S+ L E+I +++GI LS+ + ++SN ETSV I ES+R +DV+I+Q+G +
Sbjct: 43 KLLAGNSHPDLAEQISKKLGIPLSKVGVYQYSNKETSVTIGESLRDEDVYIIQTGIGEQE 102
Query: 177 VNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGAN 356
+N+ LMELLI+I+AC+ AS+ +IT V+P PY+RQ KKD +R PITAKLVA+LL AGA+
Sbjct: 103 INDFLMELLILIHACQIASARKITTVIPNFPYARQDKKDKSRAPITAKLVANLLQTAGAD 162
Query: 357 HIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMA 536
H+ITMDLHASQIQGFF++PVDNL +E +++I+ + ++ + S + A+RVA +A
Sbjct: 163 HVITMDLHASQIQGFFHIPVDNLYAEPSVLNYIRARKTDFDNAILVSPDAGGAKRVAALA 222
Query: 537 NTLKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAA 710
+ L + F LI+ E+++A+E +++LVGDV ++ +++ D+ D C ++ + L E GA
Sbjct: 223 DKLDLNFALIHKERQKANEVSKMVLVGDVTNKSCLLVDDMADTCGTLVKACDTLMEHGAK 282
Query: 711 GVYVIATHGMLSERLMKEVDDSIITKLVVTNTI 809
V I THG+ S +++ +S ++++V TNT+
Sbjct: 283 EVIAIVTHGIFSGSAREKLRNSRLSRIVCTNTV 315
>sp|P38689|KPR3_YEAST Ribose-phosphate pyrophosphokinase 3 (Phosphoribosyl pyrophosphate
synthetase 3)
Length = 320
Score = 226 bits (575), Expect = 8e-59
Identities = 122/273 (44%), Positives = 185/273 (67%), Gaps = 3/273 (1%)
Frame = +3
Query: 33 LTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFIL-QSGYIDVNNHLMELLIM 209
L E + +R+G++L+ + L + E S I ESVR +D+FI+ Q G VN+ ++ELLIM
Sbjct: 17 LAELVAKRLGLQLTSSKLKRDPTGEVSFSIGESVRDQDIFIITQIGSGVVNDRVLELLIM 76
Query: 210 INACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQ 389
INA K AS+ RITA++P PY+RQ +KD +R PITAKL+AD+L AG +H+ITMDLHASQ
Sbjct: 77 INASKTASARRITAIIPNFPYARQDRKDKSRAPITAKLMADMLTTAGCDHVITMDLHASQ 136
Query: 390 IQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIY 569
IQGFF+VPVDNL +E + +IK+N++ + I I S + A+R A +A+ L + F LI+
Sbjct: 137 IQGFFDVPVDNLYAEPSVVRYIKENVNYMDSI-IISPDAGGAKRAATLADRLDLNFALIH 195
Query: 570 VEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGML 743
E+ A+E +++LVGDV +I +I+ D+ D C + + + L E A V I THG+L
Sbjct: 196 KERARANEVSRMVLVGDVTDKICIIVDDMADTCGTLAKAAEILLENRAKSVIAIVTHGVL 255
Query: 744 SERLMKEVDDSIITKLVVTNTICQEKYVKQSDK 842
S R ++ +++S + ++V TNT+ E+ +K+ K
Sbjct: 256 SGRAIENINNSKLDRVVCTNTVPFEEKIKKCPK 288
>sp|P46585|KPR1_CANAL Ribose-phosphate pyrophosphokinase 1 (Phosphoribosyl pyrophosphate
synthetase 1)
Length = 321
Score = 221 bits (564), Expect = 2e-57
Identities = 121/269 (44%), Positives = 178/269 (66%), Gaps = 3/269 (1%)
Frame = +3
Query: 33 LTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFIL-QSGYIDVNNHLMELLIM 209
L E + +R+G++L+ + L + S E I ESVR +D+FI+ Q G +VN+ + EL+IM
Sbjct: 17 LAELVSKRLGLRLTPSELKRESTGEVQFSIGESVRDEDIFIICQIGSGEVNDRVFELMIM 76
Query: 210 INACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGANHIITMDLHASQ 389
INACK AS+ RIT +LP PY+RQ +KD +R PITAKL+AD+L AG +H+ITMDLHASQ
Sbjct: 77 INACKTASARRITVILPNFPYARQDRKDKSRAPITAKLMADMLTTAGCDHVITMDLHASQ 136
Query: 390 IQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMANTLKVRFGLIY 569
IQGFF+VPVDNL +E + +IK+ I + E I S + A+R A +A+ L + F LI+
Sbjct: 137 IQGFFDVPVDNLYAEPSVVRYIKETID-YSEAIIISSDAGGAKRAAGLADRLDLNFELIH 195
Query: 570 VEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAAGVYVIATHGML 743
E+ A+E +++LV DV +I VI+ D+ D C + + + L + A V I THG+L
Sbjct: 196 KERARANEVSRMVLVVDVTDKICVIVDDMADTCGTLAKAAEVLLDNNAKDVIAIVTHGIL 255
Query: 744 SERLMKEVDDSIITKLVVTNTICQEKYVK 830
S +K +++S + K+V TNT+ E +K
Sbjct: 256 SGNAIKNINNSKLKKVVCTNTVPFEDKLK 284
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,417,712
Number of Sequences: 369166
Number of extensions: 1986240
Number of successful extensions: 5375
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5203
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8598109270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)