Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_I15
(868 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07837|ACT2_BOMMO Actin, muscle A2 471 e-132
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 471 e-132
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 471 e-132
sp|P53458|ACT5_DIPDE Actin-5 470 e-132
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 470 e-132
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 470 e-132
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 470 e-132
sp|P92176|ACT2_LUMTE Actin-2 469 e-132
sp|P12716|ACTC_PISOC Actin, cytoplasmic 469 e-132
sp|P53470|ACT1_SCHMA Actin-1 469 e-132
>sp|P07837|ACT2_BOMMO Actin, muscle A2
Length = 376
Score = 471 bits (1212), Expect = e-132
Identities = 231/249 (92%), Positives = 242/249 (97%)
Frame = -2
Query: 840 FQCSAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 661
F C AMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 660 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQ 481
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA+AS+SLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAAASTSLEKSYELPDGQ 247
Query: 480 VITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMY 301
VITIGNERFRCPEALFQPSFLG+ES GIHET YNSIMKCDVDIRKDLYAN VLSGG+TMY
Sbjct: 248 VITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVLSGGTTMY 307
Query: 300 PGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 121
PGIADRMQKEI+ALAP T+KIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 120 PGIVHRKCF 94
PGIVHRKCF
Sbjct: 368 PGIVHRKCF 376
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 471 bits (1212), Expect = e-132
Identities = 231/249 (92%), Positives = 241/249 (96%)
Frame = -2
Query: 840 FQCSAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 661
F AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 660 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQ 481
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQ 247
Query: 480 VITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMY 301
VITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+
Sbjct: 248 VITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 300 PGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 121
PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 120 PGIVHRKCF 94
P IVHRKCF
Sbjct: 368 PSIVHRKCF 376
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 471 bits (1212), Expect = e-132
Identities = 231/249 (92%), Positives = 242/249 (97%)
Frame = -2
Query: 840 FQCSAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 661
F AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 660 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQ 481
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQ 247
Query: 480 VITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMY 301
VITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+
Sbjct: 248 VITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 300 PGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 121
PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 120 PGIVHRKCF 94
P IVHRKCF
Sbjct: 368 PSIVHRKCF 376
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 470 bits (1210), Expect = e-132
Identities = 233/249 (93%), Positives = 240/249 (96%)
Frame = -2
Query: 840 FQCSAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 661
F AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 123 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 182
Query: 660 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQ 481
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM A++SS+LEKSYELPDGQ
Sbjct: 183 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSNAASSSALEKSYELPDGQ 242
Query: 480 VITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMY 301
VITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMY
Sbjct: 243 VITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMY 302
Query: 300 PGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 121
PGI+DRMQKEISALAP TMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 303 PGISDRMQKEISALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 362
Query: 120 PGIVHRKCF 94
PGIVHRKCF
Sbjct: 363 PGIVHRKCF 371
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 470 bits (1210), Expect = e-132
Identities = 230/249 (92%), Positives = 241/249 (96%)
Frame = -2
Query: 840 FQCSAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 661
F AMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 660 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQ 481
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQ 247
Query: 480 VITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMY 301
VITIGNERFRCPEA++QPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+
Sbjct: 248 VITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 300 PGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 121
PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 120 PGIVHRKCF 94
P IVHRKCF
Sbjct: 368 PSIVHRKCF 376
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 470 bits (1210), Expect = e-132
Identities = 231/249 (92%), Positives = 240/249 (96%)
Frame = -2
Query: 840 FQCSAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 661
F AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 660 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQ 481
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA+ SSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQ 247
Query: 480 VITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMY 301
VITIGNERFRCPEA+FQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+
Sbjct: 248 VITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 300 PGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 121
PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 120 PGIVHRKCF 94
P IVHRKCF
Sbjct: 368 PSIVHRKCF 376
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 470 bits (1210), Expect = e-132
Identities = 230/249 (92%), Positives = 241/249 (96%)
Frame = -2
Query: 840 FQCSAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 661
F AMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 660 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQ 481
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQ 247
Query: 480 VITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMY 301
VITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+
Sbjct: 248 VITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 300 PGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 121
PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 120 PGIVHRKCF 94
P IVHRKCF
Sbjct: 368 PSIVHRKCF 376
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 469 bits (1208), Expect = e-132
Identities = 232/249 (93%), Positives = 240/249 (96%)
Frame = -2
Query: 840 FQCSAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 661
F AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 660 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQ 481
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYELPDGQ 247
Query: 480 VITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMY 301
VITIGNERFRCPEA+F SFLG+ESVGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TM+
Sbjct: 248 VITIGNERFRCPEAMFHASFLGMESVGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMF 307
Query: 300 PGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 121
PGIADRMQKEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 120 PGIVHRKCF 94
P IVHRKCF
Sbjct: 368 PSIVHRKCF 376
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 469 bits (1208), Expect = e-132
Identities = 230/249 (92%), Positives = 241/249 (96%)
Frame = -2
Query: 840 FQCSAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 661
F AMYVAIQAVLSLYASGRTTGIV DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 660 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQ 481
DYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQ 247
Query: 480 VITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMY 301
VITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+
Sbjct: 248 VITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 300 PGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 121
PGIADRMQKE++ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEVTALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 120 PGIVHRKCF 94
P IVHRKCF
Sbjct: 368 PSIVHRKCF 376
>sp|P53470|ACT1_SCHMA Actin-1
Length = 376
Score = 469 bits (1207), Expect = e-132
Identities = 232/249 (93%), Positives = 241/249 (96%)
Frame = -2
Query: 840 FQCSAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 661
F AMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT
Sbjct: 128 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 660 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQ 481
DY+MKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SS+LEKSYELPDGQ
Sbjct: 188 DYMMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSALEKSYELPDGQ 247
Query: 480 VITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMY 301
VITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLY+N VLSGGSTMY
Sbjct: 248 VITIGNERFRCPEALFQPSFLGMEASGIHETTYNSIMKCDVDIRKDLYSNTVLSGGSTMY 307
Query: 300 PGIADRMQKEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 121
PGIADRMQKEISALAP TMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG
Sbjct: 308 PGIADRMQKEISALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 367
Query: 120 PGIVHRKCF 94
PGIVHRKCF
Sbjct: 368 PGIVHRKCF 376
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,107,589
Number of Sequences: 369166
Number of extensions: 2088465
Number of successful extensions: 6467
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6304
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8550075140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)