Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_I12
(846 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O95747|OXSR1_HUMAN Serine/threonine-protein kinase OSR1 ... 284 2e-76
sp|Q5R495|OXSR1_PONPY Serine/threonine-protein kinase OSR1 ... 284 2e-76
sp|O88506|STK39_RAT STE20/SPS1-related proline-alanine-rich... 283 3e-76
sp|Q9UEW8|STK39_HUMAN STE20/SPS1-related proline-alanine-ri... 283 3e-76
sp|Q9Z1W9|STK39_MOUSE STE20/SPS1-related proline-alanine-ri... 283 3e-76
sp|Q863I2|OXSR1_PIG Serine/threonine-protein kinase OSR1 (O... 282 7e-76
sp|Q6P9R2|OXSR1_MOUSE Serine/threonine-protein kinase OSR1 ... 282 7e-76
sp|Q9Y6E0|STK24_HUMAN Serine/threonine-protein kinase 24 (S... 189 1e-47
sp|Q9P289|MST4_HUMAN Serine/threonine-protein kinase MST4 (... 187 3e-47
sp|Q99KH8|STK24_MOUSE Serine/threonine-protein kinase 24 187 3e-47
>sp|O95747|OXSR1_HUMAN Serine/threonine-protein kinase OSR1 (Oxidative stress-responsive 1
protein)
Length = 527
Score = 284 bits (726), Expect = 2e-76
Identities = 147/280 (52%), Positives = 195/280 (69%)
Frame = +1
Query: 4 STVYEAACPILNDRKCAMKIINLEKCSSSTLLDEIKKEIRGMRNLKNENIVTYYASFVAG 183
+ V +AA K A+K INLEKC +S +DE+ KEI+ M + NIV+YY SFV
Sbjct: 28 TAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHHPNIVSYYTSFVVK 85
Query: 184 TELCILMDLCQKGSLLDIIKATQNKRDISSGVLDENTIATIMKDVLKGLSYIHENGLVHR 363
EL ++M L GS+LDIIK K + SGVLDE+TIATI+++VL+GL Y+H+NG +HR
Sbjct: 86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHR 145
Query: 364 DLKCGNLLVKDDAVIQIADFGVAGFLAARPMEATGMSLDDKRFTFVGTPCWMAPEVMQQV 543
D+K GN+L+ +D +QIADFGV+ FLA ++ + R TFVGTPCWMAPEVM+QV
Sbjct: 146 DVKAGNILLGEDGSVQIADFGVSAFLAT----GGDITRNKVRKTFVGTPCWMAPEVMEQV 201
Query: 544 KGYNQKADIWSIGITSIEMATGQAPYAKYTPMKVLMLTLQNEPPDIDTAATSSNQYTNYG 723
+GY+ KADIWS GIT+IE+ATG APY KY PMKVLMLTLQN+PP ++T YG
Sbjct: 202 RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYG 261
Query: 724 HKYRKFTKVCLCKDPTQRPSAKELLQSPFIKSKSRDRELL 843
+RK +CL KDP +RP+A ELL+ F + K++++E L
Sbjct: 262 KSFRKMISLCLQKDPEKRPTAAELLRHKFFQ-KAKNKEFL 300
>sp|Q5R495|OXSR1_PONPY Serine/threonine-protein kinase OSR1 (Oxidative stress-responsive 1
protein)
Length = 527
Score = 284 bits (726), Expect = 2e-76
Identities = 147/280 (52%), Positives = 195/280 (69%)
Frame = +1
Query: 4 STVYEAACPILNDRKCAMKIINLEKCSSSTLLDEIKKEIRGMRNLKNENIVTYYASFVAG 183
+ V +AA K A+K INLEKC +S +DE+ KEI+ M + NIV+YY SFV
Sbjct: 28 TAVVQAAYCAPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHHPNIVSYYTSFVVK 85
Query: 184 TELCILMDLCQKGSLLDIIKATQNKRDISSGVLDENTIATIMKDVLKGLSYIHENGLVHR 363
EL ++M L GS+LDIIK K + SGVLDE+TIATI+++VL+GL Y+H+NG +HR
Sbjct: 86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHR 145
Query: 364 DLKCGNLLVKDDAVIQIADFGVAGFLAARPMEATGMSLDDKRFTFVGTPCWMAPEVMQQV 543
D+K GN+L+ +D +QIADFGV+ FLA ++ + R TFVGTPCWMAPEVM+QV
Sbjct: 146 DVKAGNILLGEDGSVQIADFGVSAFLAT----GGDITRNKVRKTFVGTPCWMAPEVMEQV 201
Query: 544 KGYNQKADIWSIGITSIEMATGQAPYAKYTPMKVLMLTLQNEPPDIDTAATSSNQYTNYG 723
+GY+ KADIWS GIT+IE+ATG APY KY PMKVLMLTLQN+PP ++T YG
Sbjct: 202 RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYG 261
Query: 724 HKYRKFTKVCLCKDPTQRPSAKELLQSPFIKSKSRDRELL 843
+RK +CL KDP +RP+A ELL+ F + K++++E L
Sbjct: 262 KSFRKMISLCLQKDPEKRPTAAELLRHKFFQ-KAKNKEFL 300
>sp|O88506|STK39_RAT STE20/SPS1-related proline-alanine-rich protein kinase (Ste-20
related kinase) (Serine/threonine-protein kinase 39)
(Pancreatic serine/threonine-protein kinase) (PS/TK)
(PSTK1)
Length = 553
Score = 283 bits (725), Expect = 3e-76
Identities = 147/281 (52%), Positives = 195/281 (69%)
Frame = +1
Query: 1 TSTVYEAACPILNDRKCAMKIINLEKCSSSTLLDEIKKEIRGMRNLKNENIVTYYASFVA 180
T+ V A C +R A+K INLEKC +S +DE+ KEI+ M + N+VTYY SFV
Sbjct: 83 TAVVQAALCKPRQER-VAIKRINLEKCQTS--MDELLKEIQAMSQCSHPNVVTYYTSFVV 139
Query: 181 GTELCILMDLCQKGSLLDIIKATQNKRDISSGVLDENTIATIMKDVLKGLSYIHENGLVH 360
EL ++M L GS+LDIIK N+ + +GVL+E IATI+K+VL+GL Y+H NG +H
Sbjct: 140 KDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIH 199
Query: 361 RDLKCGNLLVKDDAVIQIADFGVAGFLAARPMEATGMSLDDKRFTFVGTPCWMAPEVMQQ 540
RDLK GN+L+ +D +QIADFGV+ FLA ++ + R TFVGTPCWMAPEVM+Q
Sbjct: 200 RDLKAGNILLGEDGSVQIADFGVSAFLAT----GGDVTRNKVRKTFVGTPCWMAPEVMEQ 255
Query: 541 VKGYNQKADIWSIGITSIEMATGQAPYAKYTPMKVLMLTLQNEPPDIDTAATSSNQYTNY 720
V+GY+ KAD+WS GIT+IE+ATG APY KY PMKVLMLTLQN+PP ++T Y
Sbjct: 256 VRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTLETGVEDKEMMKKY 315
Query: 721 GHKYRKFTKVCLCKDPTQRPSAKELLQSPFIKSKSRDRELL 843
G +RK +CL KDP++RP+A ELL+ F + K+++RE L
Sbjct: 316 GKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQ-KAKNREYL 355
>sp|Q9UEW8|STK39_HUMAN STE20/SPS1-related proline-alanine-rich protein kinase (Ste-20
related kinase) (Serine/threonine-protein kinase 39)
(DCHT)
Length = 547
Score = 283 bits (725), Expect = 3e-76
Identities = 147/281 (52%), Positives = 195/281 (69%)
Frame = +1
Query: 1 TSTVYEAACPILNDRKCAMKIINLEKCSSSTLLDEIKKEIRGMRNLKNENIVTYYASFVA 180
T+ V A C +R A+K INLEKC +S +DE+ KEI+ M + N+VTYY SFV
Sbjct: 76 TAVVQAALCKPRQER-VAIKRINLEKCQTS--MDELLKEIQAMSQCSHPNVVTYYTSFVV 132
Query: 181 GTELCILMDLCQKGSLLDIIKATQNKRDISSGVLDENTIATIMKDVLKGLSYIHENGLVH 360
EL ++M L GS+LDIIK N+ + +GVL+E IATI+K+VL+GL Y+H NG +H
Sbjct: 133 KDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIH 192
Query: 361 RDLKCGNLLVKDDAVIQIADFGVAGFLAARPMEATGMSLDDKRFTFVGTPCWMAPEVMQQ 540
RDLK GN+L+ +D +QIADFGV+ FLA ++ + R TFVGTPCWMAPEVM+Q
Sbjct: 193 RDLKAGNILLGEDGSVQIADFGVSAFLAT----GGDVTRNKVRKTFVGTPCWMAPEVMEQ 248
Query: 541 VKGYNQKADIWSIGITSIEMATGQAPYAKYTPMKVLMLTLQNEPPDIDTAATSSNQYTNY 720
V+GY+ KAD+WS GIT+IE+ATG APY KY PMKVLMLTLQN+PP ++T Y
Sbjct: 249 VRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTLETGVEDKEMMKKY 308
Query: 721 GHKYRKFTKVCLCKDPTQRPSAKELLQSPFIKSKSRDRELL 843
G +RK +CL KDP++RP+A ELL+ F + K+++RE L
Sbjct: 309 GKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQ-KAKNREYL 348
>sp|Q9Z1W9|STK39_MOUSE STE20/SPS1-related proline-alanine-rich protein kinase (Ste-20
related kinase) (Serine/threonine-protein kinase 39)
Length = 556
Score = 283 bits (725), Expect = 3e-76
Identities = 147/281 (52%), Positives = 195/281 (69%)
Frame = +1
Query: 1 TSTVYEAACPILNDRKCAMKIINLEKCSSSTLLDEIKKEIRGMRNLKNENIVTYYASFVA 180
T+ V A C +R A+K INLEKC +S +DE+ KEI+ M + N+VTYY SFV
Sbjct: 86 TAVVQAALCKPRQER-VAIKRINLEKCQTS--MDELLKEIQAMSQCSHPNVVTYYTSFVV 142
Query: 181 GTELCILMDLCQKGSLLDIIKATQNKRDISSGVLDENTIATIMKDVLKGLSYIHENGLVH 360
EL ++M L GS+LDIIK N+ + +GVL+E IATI+K+VL+GL Y+H NG +H
Sbjct: 143 KDELWLVMKLLSGGSMLDIIKYIVNRGEHKNGVLEEAIIATILKEVLEGLDYLHRNGQIH 202
Query: 361 RDLKCGNLLVKDDAVIQIADFGVAGFLAARPMEATGMSLDDKRFTFVGTPCWMAPEVMQQ 540
RDLK GN+L+ +D +QIADFGV+ FLA ++ + R TFVGTPCWMAPEVM+Q
Sbjct: 203 RDLKAGNILLGEDGSVQIADFGVSAFLAT----GGDVTRNKVRKTFVGTPCWMAPEVMEQ 258
Query: 541 VKGYNQKADIWSIGITSIEMATGQAPYAKYTPMKVLMLTLQNEPPDIDTAATSSNQYTNY 720
V+GY+ KAD+WS GIT+IE+ATG APY KY PMKVLMLTLQN+PP ++T Y
Sbjct: 259 VRGYDFKADMWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPTLETGVEDKEMMKKY 318
Query: 721 GHKYRKFTKVCLCKDPTQRPSAKELLQSPFIKSKSRDRELL 843
G +RK +CL KDP++RP+A ELL+ F + K+++RE L
Sbjct: 319 GKSFRKLLSLCLQKDPSKRPTAAELLKCKFFQ-KAKNREYL 358
>sp|Q863I2|OXSR1_PIG Serine/threonine-protein kinase OSR1 (Oxidative stress-responsive 1
protein)
Length = 529
Score = 282 bits (722), Expect = 7e-76
Identities = 147/280 (52%), Positives = 194/280 (69%)
Frame = +1
Query: 4 STVYEAACPILNDRKCAMKIINLEKCSSSTLLDEIKKEIRGMRNLKNENIVTYYASFVAG 183
+ V +AA K A+K INLEKC +S +DE+ KEI+ M + NIV+YY SFV
Sbjct: 28 TAVVQAAYCTPKKEKVAIKRINLEKCQTS--MDELLKEIQAMSQCHHPNIVSYYTSFVVK 85
Query: 184 TELCILMDLCQKGSLLDIIKATQNKRDISSGVLDENTIATIMKDVLKGLSYIHENGLVHR 363
EL ++M L GS+LDIIK K + SGVLDE TIATI+++VL+GL Y+H+NG +HR
Sbjct: 86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEATIATILREVLEGLEYLHKNGQIHR 145
Query: 364 DLKCGNLLVKDDAVIQIADFGVAGFLAARPMEATGMSLDDKRFTFVGTPCWMAPEVMQQV 543
D+K GN+L+ +D +QIADFGV+ FLA ++ + R TFVGTPCWMAPEVM+QV
Sbjct: 146 DVKAGNILLGEDGSVQIADFGVSAFLAT----GGDITRNKVRKTFVGTPCWMAPEVMEQV 201
Query: 544 KGYNQKADIWSIGITSIEMATGQAPYAKYTPMKVLMLTLQNEPPDIDTAATSSNQYTNYG 723
+GY+ KADIWS GIT+IE+ATG APY KY PMKVLMLTLQN+PP ++T YG
Sbjct: 202 RGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYG 261
Query: 724 HKYRKFTKVCLCKDPTQRPSAKELLQSPFIKSKSRDRELL 843
+RK +CL KDP +RP+A ELL+ F + K++++E L
Sbjct: 262 KSFRKMISLCLQKDPEKRPTAAELLRHKFFQ-KAKNKEYL 300
>sp|Q6P9R2|OXSR1_MOUSE Serine/threonine-protein kinase OSR1 (Oxidative stress-responsive 1
protein)
Length = 527
Score = 282 bits (722), Expect = 7e-76
Identities = 148/281 (52%), Positives = 195/281 (69%)
Frame = +1
Query: 1 TSTVYEAACPILNDRKCAMKIINLEKCSSSTLLDEIKKEIRGMRNLKNENIVTYYASFVA 180
T+ V A C +R A+K INLEKC +S +DE+ KEI+ M + NIV+YY SFV
Sbjct: 28 TAVVQAAYCAPKKER-VAIKRINLEKCQTS--MDELLKEIQAMSQCHHPNIVSYYTSFVV 84
Query: 181 GTELCILMDLCQKGSLLDIIKATQNKRDISSGVLDENTIATIMKDVLKGLSYIHENGLVH 360
EL ++M L GS+LDIIK K + SGVLDE TIATI+++VL+GL Y+H+NG +H
Sbjct: 85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEPTIATILREVLEGLEYLHKNGQIH 144
Query: 361 RDLKCGNLLVKDDAVIQIADFGVAGFLAARPMEATGMSLDDKRFTFVGTPCWMAPEVMQQ 540
RD+K GN+L+ +D +QIADFGV+ FLA ++ + R TFVGTPCWMAPEVM+Q
Sbjct: 145 RDVKAGNILLGEDGSVQIADFGVSAFLAT----GGDITRNKVRKTFVGTPCWMAPEVMEQ 200
Query: 541 VKGYNQKADIWSIGITSIEMATGQAPYAKYTPMKVLMLTLQNEPPDIDTAATSSNQYTNY 720
V+GY+ KADIWS GIT+IE+ATG APY KY PMKVLMLTLQN+PP ++T Y
Sbjct: 201 VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKY 260
Query: 721 GHKYRKFTKVCLCKDPTQRPSAKELLQSPFIKSKSRDRELL 843
G +RK +CL KDP +RP+A ELL+ F + K++++E L
Sbjct: 261 GKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ-KAKNKEFL 300
>sp|Q9Y6E0|STK24_HUMAN Serine/threonine-protein kinase 24 (STE20-like kinase MST3) (MST-3)
(Mammalian STE20-like protein kinase 3)
Length = 443
Score = 189 bits (479), Expect = 1e-47
Identities = 104/265 (39%), Positives = 160/265 (60%)
Frame = +1
Query: 52 AMKIINLEKCSSSTLLDEIKKEIRGMRNLKNENIVTYYASFVAGTELCILMDLCQKGSLL 231
A+KII+LE+ +++I++EI + + + YY S++ T+L I+M+ GS L
Sbjct: 63 AIKIIDLEEAEDE--IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL 120
Query: 232 DIIKATQNKRDISSGVLDENTIATIMKDVLKGLSYIHENGLVHRDLKCGNLLVKDDAVIQ 411
D+++ G LDE IATI++++LKGL Y+H +HRD+K N+L+ + ++
Sbjct: 121 DLLEP---------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 171
Query: 412 IADFGVAGFLAARPMEATGMSLDDKRFTFVGTPCWMAPEVMQQVKGYNQKADIWSIGITS 591
+ADFGVAG L + KR TFVGTP WMAPEV++Q Y+ KADIWS+GIT+
Sbjct: 172 LADFGVAGQLTDTQI---------KRNTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITA 221
Query: 592 IEMATGQAPYAKYTPMKVLMLTLQNEPPDIDTAATSSNQYTNYGHKYRKFTKVCLCKDPT 771
IE+A G+ P+++ PMKVL L +N PP ++ NY ++F + CL K+P+
Sbjct: 222 IELARGEPPHSELHPMKVLFLIPKNNPPTLE---------GNYSKPLKEFVEACLNKEPS 272
Query: 772 QRPSAKELLQSPFIKSKSRDRELLS 846
RP+AKELL+ FI ++ L+
Sbjct: 273 FRPTAKELLKHKFILRNAKKTSYLT 297
>sp|Q9P289|MST4_HUMAN Serine/threonine-protein kinase MST4 (STE20-like kinase MST4)
(MST-4) (Mammalian STE20-like protein kinase 4)
(Serine/threonine-protein kinase MASK) (Mst3 and
SOK1-related kinase)
Length = 416
Score = 187 bits (475), Expect = 3e-47
Identities = 106/265 (40%), Positives = 158/265 (59%)
Frame = +1
Query: 52 AMKIINLEKCSSSTLLDEIKKEIRGMRNLKNENIVTYYASFVAGTELCILMDLCQKGSLL 231
A+KII+LE+ +++I++EI + + + YY S++ G++L I+M+ GS L
Sbjct: 51 AIKIIDLEEAEDE--IEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSAL 108
Query: 232 DIIKATQNKRDISSGVLDENTIATIMKDVLKGLSYIHENGLVHRDLKCGNLLVKDDAVIQ 411
D+++A G DE IAT++K++LKGL Y+H +HRD+K N+L+ + ++
Sbjct: 109 DLLRA---------GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVK 159
Query: 412 IADFGVAGFLAARPMEATGMSLDDKRFTFVGTPCWMAPEVMQQVKGYNQKADIWSIGITS 591
+ADFGVAG L + KR TFVGTP WMAPEV+QQ Y+ KADIWS+GIT+
Sbjct: 160 LADFGVAGQLTDTQI---------KRNTFVGTPFWMAPEVIQQ-SAYDSKADIWSLGITA 209
Query: 592 IEMATGQAPYAKYTPMKVLMLTLQNEPPDIDTAATSSNQYTNYGHKYRKFTKVCLCKDPT 771
IE+A G+ P + PM+VL L +N PP + T S +++F CL KDP+
Sbjct: 210 IELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKS---------FKEFIDACLNKDPS 260
Query: 772 QRPSAKELLQSPFIKSKSRDRELLS 846
RP+AKELL+ FI S+ L+
Sbjct: 261 FRPTAKELLKHKFIVKNSKKTSYLT 285
>sp|Q99KH8|STK24_MOUSE Serine/threonine-protein kinase 24
Length = 431
Score = 187 bits (475), Expect = 3e-47
Identities = 104/265 (39%), Positives = 160/265 (60%)
Frame = +1
Query: 52 AMKIINLEKCSSSTLLDEIKKEIRGMRNLKNENIVTYYASFVAGTELCILMDLCQKGSLL 231
A+KII+LE+ +++I++EI + + + YY S++ T+L I+M+ GS L
Sbjct: 51 AIKIIDLEEAEDE--IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSAL 108
Query: 232 DIIKATQNKRDISSGVLDENTIATIMKDVLKGLSYIHENGLVHRDLKCGNLLVKDDAVIQ 411
D+++ G LDE IATI++++LKGL Y+H +HRD+K N+L+ + ++
Sbjct: 109 DLLEP---------GPLDEIQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 159
Query: 412 IADFGVAGFLAARPMEATGMSLDDKRFTFVGTPCWMAPEVMQQVKGYNQKADIWSIGITS 591
+ADFGVAG L + KR TFVGTP WMAPEV++Q Y+ KADIWS+GIT+
Sbjct: 160 LADFGVAGQLTDTQI---------KRNTFVGTPFWMAPEVIKQ-SAYDSKADIWSLGITA 209
Query: 592 IEMATGQAPYAKYTPMKVLMLTLQNEPPDIDTAATSSNQYTNYGHKYRKFTKVCLCKDPT 771
IE+A G+ P+++ PMKVL L +N PP ++ NY ++F + CL K+P+
Sbjct: 210 IELAKGEPPHSELHPMKVLFLIPKNNPPTLE---------GNYSKPLKEFVEACLNKEPS 260
Query: 772 QRPSAKELLQSPFIKSKSRDRELLS 846
RP+AKELL+ FI ++ L+
Sbjct: 261 FRPTAKELLKHKFIIRNAKKTSYLT 285
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,218,324
Number of Sequences: 369166
Number of extensions: 1906131
Number of successful extensions: 9309
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6862
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8293644780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)