Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dr_sW_010_D22 (298 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|O44125|RL37_SCHMA 60S ribosomal protein L37 144 6e-35 sp|Q9C0T1|RL37_EMENI 60S ribosomal protein L37 137 6e-33 sp|P05733|RL37B_SCHPO 60S ribosomal protein L37-B (L37-2) (... 135 2e-32 sp|Q9VXX8|RL371_DROME Probable 60S ribosomal protein L37-A 135 3e-32 sp|P59289|RL37A_SCHPO 60S ribosomal protein L37-A (L37-1) 134 5e-32 sp|Q962S7|RL37_SPOFR 60S ribosomal protein L37 131 4e-31 sp|Q9W1U6|RL372_DROME Probable 60S ribosomal protein L37-B 127 1e-29 sp|P51402|RL37B_YEAST 60S ribosomal protein L37-B (L35) (YP55) 124 7e-29 sp|P49166|RL37A_YEAST 60S ribosomal protein L37-A (L35) (YP55) 124 7e-29 sp|P49622|RL37_CAEEL 60S ribosomal protein L37 122 3e-28
>sp|O44125|RL37_SCHMA 60S ribosomal protein L37 Length = 88 Score = 144 bits (363), Expect = 6e-35 Identities = 62/83 (74%), Positives = 72/83 (86%) Frame = +3 Query: 6 MTKGTTSFGKRHNKTHTFCRRCGKSSFHIQKKTCASCAYPNPKIRHFNWSTKAQGRRTTG 185 MTKGTTSFGKRHNK+HT CRRCG+ S+HIQKKTC+SC YP+ ++R +NWS KA+ RRTTG Sbjct: 1 MTKGTTSFGKRHNKSHTQCRRCGRKSYHIQKKTCSSCGYPSARLRKYNWSEKAKRRRTTG 60 Query: 186 TGRCLHLKDIHRRFKNGFRSGKP 254 TGR LHLK +HRRFK GFRSG P Sbjct: 61 TGRMLHLKRVHRRFKQGFRSGPP 83
>sp|Q9C0T1|RL37_EMENI 60S ribosomal protein L37 Length = 92 Score = 137 bits (346), Expect = 6e-33 Identities = 58/83 (69%), Positives = 69/83 (83%) Frame = +3 Query: 6 MTKGTTSFGKRHNKTHTFCRRCGKSSFHIQKKTCASCAYPNPKIRHFNWSTKAQGRRTTG 185 MTKGT+SFGKRHNKTHT CRRCG+ S+HIQK TCA+C YP K R +NWS KA+ R+TTG Sbjct: 1 MTKGTSSFGKRHNKTHTLCRRCGRRSYHIQKSTCANCGYPAAKTRKYNWSEKAKRRKTTG 60 Query: 186 TGRCLHLKDIHRRFKNGFRSGKP 254 +GR HL+D+HRRFKNGF+ G P Sbjct: 61 SGRTAHLRDVHRRFKNGFQVGTP 83
>sp|P05733|RL37B_SCHPO 60S ribosomal protein L37-B (L37-2) (YL27) Length = 91 Score = 135 bits (341), Expect = 2e-32 Identities = 60/83 (72%), Positives = 65/83 (78%) Frame = +3 Query: 6 MTKGTTSFGKRHNKTHTFCRRCGKSSFHIQKKTCASCAYPNPKIRHFNWSTKAQGRRTTG 185 MTKGT SFG RHNK+HT CRRCGK SFHIQK TCA C YP K R +NW KA+ RRTTG Sbjct: 1 MTKGTQSFGMRHNKSHTICRRCGKRSFHIQKSTCACCGYPAAKTRSYNWGAKAKRRRTTG 60 Query: 186 TGRCLHLKDIHRRFKNGFRSGKP 254 TGR +LK +HR FKNGFRSGKP Sbjct: 61 TGRMSYLKKVHRSFKNGFRSGKP 83
>sp|Q9VXX8|RL371_DROME Probable 60S ribosomal protein L37-A Length = 93 Score = 135 bits (340), Expect = 3e-32 Identities = 58/81 (71%), Positives = 67/81 (82%) Frame = +3 Query: 6 MTKGTTSFGKRHNKTHTFCRRCGKSSFHIQKKTCASCAYPNPKIRHFNWSTKAQGRRTTG 185 MTKGT+SFGKRHNKTHT CRRCG+SS+HIQK TCA C YP K+R +NWS KA+ R+TTG Sbjct: 1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTG 60 Query: 186 TGRCLHLKDIHRRFKNGFRSG 248 TGR HLK + RRF+NGFR G Sbjct: 61 TGRMQHLKVVRRRFRNGFREG 81
>sp|P59289|RL37A_SCHPO 60S ribosomal protein L37-A (L37-1) Length = 89 Score = 134 bits (338), Expect = 5e-32 Identities = 59/83 (71%), Positives = 65/83 (78%) Frame = +3 Query: 6 MTKGTTSFGKRHNKTHTFCRRCGKSSFHIQKKTCASCAYPNPKIRHFNWSTKAQGRRTTG 185 MTKGT SFG RHNK+HT CRRCGK SFHIQK TCA C YP K R +NW KA+ RRTTG Sbjct: 1 MTKGTQSFGMRHNKSHTICRRCGKRSFHIQKSTCACCGYPAAKTRSYNWGAKAKRRRTTG 60 Query: 186 TGRCLHLKDIHRRFKNGFRSGKP 254 TGR +LK +HR FKNGFR+GKP Sbjct: 61 TGRMSYLKKVHRSFKNGFRAGKP 83
>sp|Q962S7|RL37_SPOFR 60S ribosomal protein L37 Length = 92 Score = 131 bits (330), Expect = 4e-31 Identities = 56/83 (67%), Positives = 67/83 (80%) Frame = +3 Query: 6 MTKGTTSFGKRHNKTHTFCRRCGKSSFHIQKKTCASCAYPNPKIRHFNWSTKAQGRRTTG 185 MTKGT+SFGKR NKTHT CRRCG+SS+HIQK CA C YP K+R ++WS KA+ R+TTG Sbjct: 1 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTG 60 Query: 186 TGRCLHLKDIHRRFKNGFRSGKP 254 TGR HLK + RRF+NGF+ GKP Sbjct: 61 TGRMRHLKIVRRRFRNGFKEGKP 83
>sp|Q9W1U6|RL372_DROME Probable 60S ribosomal protein L37-B Length = 89 Score = 127 bits (318), Expect = 1e-29 Identities = 54/81 (66%), Positives = 63/81 (77%) Frame = +3 Query: 6 MTKGTTSFGKRHNKTHTFCRRCGKSSFHIQKKTCASCAYPNPKIRHFNWSTKAQGRRTTG 185 MTKGTTSFGKRHNKTHT CRRCG SS+H+QK C+ C YP K R FNWS KA+GR+ G Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQG 60 Query: 186 TGRCLHLKDIHRRFKNGFRSG 248 TGR +LK++ RRF+NG R G Sbjct: 61 TGRMRYLKNLRRRFRNGLREG 81
>sp|P51402|RL37B_YEAST 60S ribosomal protein L37-B (L35) (YP55) Length = 88 Score = 124 bits (311), Expect = 7e-29 Identities = 53/81 (65%), Positives = 64/81 (79%) Frame = +3 Query: 6 MTKGTTSFGKRHNKTHTFCRRCGKSSFHIQKKTCASCAYPNPKIRHFNWSTKAQGRRTTG 185 M KGT SFGKRHNK+HT C RCG+ SFH+QKKTC+SC YP+ K R NW+ KA+ R TTG Sbjct: 1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTG 60 Query: 186 TGRCLHLKDIHRRFKNGFRSG 248 TGR +LK + RRFKNGF++G Sbjct: 61 TGRMRYLKHVSRRFKNGFQTG 81
>sp|P49166|RL37A_YEAST 60S ribosomal protein L37-A (L35) (YP55) Length = 88 Score = 124 bits (311), Expect = 7e-29 Identities = 53/81 (65%), Positives = 63/81 (77%) Frame = +3 Query: 6 MTKGTTSFGKRHNKTHTFCRRCGKSSFHIQKKTCASCAYPNPKIRHFNWSTKAQGRRTTG 185 M KGT SFGKRHNK+HT C RCG+ SFH+QKKTC+SC YP K R +NW KA+ R TTG Sbjct: 1 MGKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPAAKTRSYNWGAKAKRRHTTG 60 Query: 186 TGRCLHLKDIHRRFKNGFRSG 248 TGR +LK + RRFKNGF++G Sbjct: 61 TGRMRYLKHVSRRFKNGFQTG 81
>sp|P49622|RL37_CAEEL 60S ribosomal protein L37 Length = 91 Score = 122 bits (305), Expect = 3e-28 Identities = 53/83 (63%), Positives = 64/83 (77%) Frame = +3 Query: 6 MTKGTTSFGKRHNKTHTFCRRCGKSSFHIQKKTCASCAYPNPKIRHFNWSTKAQGRRTTG 185 MTKGT +FGK+H K+HT C+RCGKSSFHIQKK CASC Y + K R +NW K+ RRTTG Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60 Query: 186 TGRCLHLKDIHRRFKNGFRSGKP 254 TGR HL+D++ RF+NGFR P Sbjct: 61 TGRTRHLRDVNARFRNGFRGTTP 83
Database: Non-redundant SwissProt sequences Posted date: Dec 6, 2005 7:40 AM Number of letters in database: 68,354,980 Number of sequences in database: 184,735 Database: swissprot.01 Posted date: Dec 6, 2005 8:18 AM Number of letters in database: 66,202,850 Number of sequences in database: 184,431 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,037,336 Number of Sequences: 369166 Number of extensions: 601088 Number of successful extensions: 1449 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1424 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1447 length of database: 68,354,980 effective HSP length: 68 effective length of database: 55,793,000 effective search space used: 1673790000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)