Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_D01
(552 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 272 5e-73
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 271 6e-73
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 271 6e-73
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 271 6e-73
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 271 6e-73
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 268 5e-72
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 265 6e-71
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 264 9e-71
sp|O23755|EF2_BETVU Elongation factor 2 (EF-2) 227 1e-59
sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2) 226 3e-59
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 272 bits (695), Expect = 5e-73
Identities = 126/173 (72%), Positives = 144/173 (83%)
Frame = +1
Query: 1 ATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVY 180
ATK+GVLCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YA VLTA P L+EP+Y
Sbjct: 686 ATKEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQPRLMEPIY 745
Query: 181 QCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTG 360
EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TG
Sbjct: 746 LVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTG 805
Query: 361 GQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 519
GQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 806 GQAFPQCVFDHWQILPGDPFDSASRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 271 bits (694), Expect = 6e-73
Identities = 126/173 (72%), Positives = 144/173 (83%)
Frame = +1
Query: 1 ATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVY 180
ATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y
Sbjct: 686 ATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIY 745
Query: 181 QCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTG 360
EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TG
Sbjct: 746 LVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTG 805
Query: 361 GQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 519
GQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 806 GQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 271 bits (694), Expect = 6e-73
Identities = 126/173 (72%), Positives = 144/173 (83%)
Frame = +1
Query: 1 ATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVY 180
ATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y
Sbjct: 686 ATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIY 745
Query: 181 QCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTG 360
EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TG
Sbjct: 746 LVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTG 805
Query: 361 GQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 519
GQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 806 GQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 271 bits (694), Expect = 6e-73
Identities = 126/173 (72%), Positives = 144/173 (83%)
Frame = +1
Query: 1 ATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVY 180
ATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y
Sbjct: 686 ATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIY 745
Query: 181 QCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTG 360
EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TG
Sbjct: 746 LVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTG 805
Query: 361 GQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 519
GQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 806 GQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 271 bits (694), Expect = 6e-73
Identities = 126/173 (72%), Positives = 144/173 (83%)
Frame = +1
Query: 1 ATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVY 180
ATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y
Sbjct: 686 ATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIY 745
Query: 181 QCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTG 360
EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TG
Sbjct: 746 LVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTG 805
Query: 361 GQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 519
GQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 806 GQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 268 bits (686), Expect = 5e-72
Identities = 128/173 (73%), Positives = 145/173 (83%)
Frame = +1
Query: 1 ATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVY 180
AT++GVL +ENMRGVRFN+HDVTLHADAIHRGGGQIIPTARR FYASVLTA P LLEPVY
Sbjct: 680 ATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVY 739
Query: 181 QCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTG 360
EIQ PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT++LR+ TG
Sbjct: 740 LVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTG 799
Query: 361 GQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 519
GQAFPQCVFDHWQ+ PG+PL+ +KP V DTRKRKGL E VP LD +LDK+
Sbjct: 800 GQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLDKM 852
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 265 bits (677), Expect = 6e-71
Identities = 124/173 (71%), Positives = 142/173 (82%)
Frame = +1
Query: 1 ATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVY 180
ATK+G LCEENMRGVRF++HDVTLHADAIHR GGQIIPTARRC YASVLTA P L+EP+Y
Sbjct: 686 ATKEGALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTAQPRLMEPIY 745
Query: 181 QCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTG 360
EIQ PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TG
Sbjct: 746 LVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTG 805
Query: 361 GQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 519
GQAFPQCVFDHWQ+ PG+P D S+ V +TRKRKGL E +P LD FLDKL
Sbjct: 806 GQAFPQCVFDHWQILPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 264 bits (675), Expect = 9e-71
Identities = 122/173 (70%), Positives = 145/173 (83%)
Frame = +1
Query: 1 ATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVY 180
A+K+G+L +EN+RGVRFNI+DVTLHADAIHRGGGQIIPT RRC YA+ +TA P L+EPVY
Sbjct: 672 ASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVY 731
Query: 181 QCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTG 360
CEIQ PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT++LR+ TG
Sbjct: 732 LCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTG 791
Query: 361 GQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 519
GQAFPQCVFDHWQ+ PG+P +P SKP V+DTRKRKGL E +P L ++LDKL
Sbjct: 792 GQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 844
>sp|O23755|EF2_BETVU Elongation factor 2 (EF-2)
Length = 843
Score = 227 bits (579), Expect = 1e-59
Identities = 113/173 (65%), Positives = 129/173 (74%)
Frame = +1
Query: 1 ATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVY 180
A+K+G L EENMRG+ F + DV LH DAIHRGGGQIIPTARR FYAS LTA P LLEPVY
Sbjct: 671 ASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVY 730
Query: 181 QCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTG 360
EIQ PE ALGGIYS LN++RG +F EMQ GTP Y +KAYLPV ESF F+S LRA T
Sbjct: 731 LVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSTLRASTS 790
Query: 361 GQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 519
GQAFPQCVFDHW++ P +PL+ S+ V RKRKGL E + L +F DKL
Sbjct: 791 GQAFPQCVFDHWEMMPSDPLEAGSQASTLVSVIRKRKGLKEQMTPLSEFEDKL 843
>sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2)
Length = 842
Score = 226 bits (576), Expect = 3e-59
Identities = 113/173 (65%), Positives = 129/173 (74%)
Frame = +1
Query: 1 ATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVY 180
A+K+G + EEN+R RFNI DV LHADAIHRGGGQIIPTARR YAS L ASP + EPV+
Sbjct: 670 ASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVF 729
Query: 181 QCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTG 360
EIQ E A+GGIYS LNK+RG +FSE Q GTP Y +KAYLPVNESF FT ELR T
Sbjct: 730 LVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATA 789
Query: 361 GQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 519
GQAFPQ VFDHW G+PLDP SKPG V + RKRKGL E+VP ++ D+L
Sbjct: 790 GQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,352,723
Number of Sequences: 369166
Number of extensions: 1446156
Number of successful extensions: 3062
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2950
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3882260660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)