Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_C02
(378 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P39745|SUR1_CAEEL Mitogen-activated protein kinase mpk-1... 40 0.002
sp|P21708|MK03_RAT Mitogen-activated protein kinase 3 (Extr... 37 0.014
sp|Q63844|MK03_MOUSE Mitogen-activated protein kinase 3 (Ex... 37 0.014
sp|P28482|MK01_HUMAN Mitogen-activated protein kinase 1 (Ex... 37 0.014
sp|P63086|MK01_RAT Mitogen-activated protein kinase 1 (Extr... 37 0.014
sp|P46196|MK01_BOVIN Mitogen-activated protein kinase 1 (Ex... 37 0.014
sp|P27361|MK03_HUMAN Mitogen-activated protein kinase 3 (Ex... 36 0.031
sp|P26696|MK01_XENLA Mitogen-activated protein kinase 1 (My... 36 0.031
>sp|P39745|SUR1_CAEEL Mitogen-activated protein kinase mpk-1 (MAP kinase sur-1)
Length = 444
Score = 40.0 bits (92), Expect = 0.002
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = +3
Query: 9 PFTFEHELDDLPIEKLREMIWERVK-YFRQLE 101
PFT E E DDLP EKL+E+IWE + + R++E
Sbjct: 399 PFTLEMEFDDLPKEKLKELIWEEAEAHHRRME 430
>sp|P21708|MK03_RAT Mitogen-activated protein kinase 3 (Extracellular signal-regulated
kinase 1) (ERK-1) (Insulin-stimulated MAP2 kinase) (MAP
kinase 1) (MAPK 1) (p44-ERK1) (ERT2) (p44-MAPK)
(Microtubule-associated protein 2 kinase) (MNK1)
Length = 380
Score = 37.0 bits (84), Expect = 0.014
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 9 PFTFEHELDDLPIEKLREMIWERVKYFR 92
PFTF+ ELDDLP E+L+E+I++ F+
Sbjct: 346 PFTFDMELDDLPKERLKELIFQETARFQ 373
>sp|Q63844|MK03_MOUSE Mitogen-activated protein kinase 3 (Extracellular signal-regulated
kinase 1) (ERK-1) (Insulin-stimulated MAP2 kinase) (MAP
kinase 1) (MAPK 1) (p44-ERK1) (ERT2) (p44-MAPK)
(Microtubule-associated protein 2 kinase) (MNK1)
Length = 380
Score = 37.0 bits (84), Expect = 0.014
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 9 PFTFEHELDDLPIEKLREMIWERVKYFR 92
PFTF+ ELDDLP E+L+E+I++ F+
Sbjct: 346 PFTFDMELDDLPKERLKELIFQETARFQ 373
>sp|P28482|MK01_HUMAN Mitogen-activated protein kinase 1 (Extracellular signal-regulated
kinase 2) (ERK-2) (Mitogen-activated protein kinase 2)
(MAP kinase 2) (MAPK 2) (p42-MAPK) (ERT1)
Length = 360
Score = 37.0 bits (84), Expect = 0.014
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 9 PFTFEHELDDLPIEKLREMIWERVKYFR 92
PF F+ ELDDLP EKL+E+I+E F+
Sbjct: 328 PFKFDMELDDLPKEKLKELIFEETARFQ 355
>sp|P63086|MK01_RAT Mitogen-activated protein kinase 1 (Extracellular signal-regulated
kinase 2) (ERK-2) (Mitogen-activated protein kinase 2)
(MAP kinase 2) (MAPK 2) (p42-MAPK) (ERT1)
sp|P63085|MK01_MOUSE Mitogen-activated protein kinase 1 (Extracellular signal-regulated
kinase 2) (ERK-2) (Mitogen-activated protein kinase 2)
(MAP kinase 2) (MAPK 2) (p42-MAPK) (ERT1)
Length = 358
Score = 37.0 bits (84), Expect = 0.014
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 9 PFTFEHELDDLPIEKLREMIWERVKYFR 92
PF F+ ELDDLP EKL+E+I+E F+
Sbjct: 326 PFKFDMELDDLPKEKLKELIFEETARFQ 353
>sp|P46196|MK01_BOVIN Mitogen-activated protein kinase 1 (Extracellular signal-regulated
kinase 2) (ERK-2) (Mitogen-activated protein kinase 2)
(MAP kinase 2) (MAPK 2) (p42-MAPK) (ERT1)
Length = 360
Score = 37.0 bits (84), Expect = 0.014
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +3
Query: 9 PFTFEHELDDLPIEKLREMIWERVKYFR 92
PF F+ ELDDLP EKL+E+I+E F+
Sbjct: 328 PFKFDMELDDLPKEKLKELIFEETARFQ 355
>sp|P27361|MK03_HUMAN Mitogen-activated protein kinase 3 (Extracellular signal-regulated
kinase 1) (ERK-1) (Insulin-stimulated MAP2 kinase) (MAP
kinase 1) (MAPK 1) (p44-ERK1) (ERT2) (p44-MAPK)
(Microtubule-associated protein 2 kinase)
Length = 379
Score = 35.8 bits (81), Expect = 0.031
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 9 PFTFEHELDDLPIEKLREMIWERVKYFR 92
PFTF ELDDLP E+L+E+I++ F+
Sbjct: 345 PFTFAMELDDLPKERLKELIFQETARFQ 372
>sp|P26696|MK01_XENLA Mitogen-activated protein kinase 1 (Myelin xP42 protein kinase)
(Myelin basic protein kinase) (MBP kinase) (M phase MAP
kinase)
Length = 361
Score = 35.8 bits (81), Expect = 0.031
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +3
Query: 9 PFTFEHELDDLPIEKLREMIWERVKYFR 92
PF FE ELDDLP E L+E+I+E F+
Sbjct: 331 PFKFEMELDDLPKETLKELIFEETARFQ 358
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,965,555
Number of Sequences: 369166
Number of extensions: 469128
Number of successful extensions: 1255
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 68,354,980
effective HSP length: 92
effective length of database: 51,359,360
effective search space used: 1694858880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)