Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_010_A19
(616 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P04931|ARP_PLAFA Asparagine-rich protein (AG319) (ARP) 36 0.068
sp|Q4A0V8|UAFA_STAS1 Uro-adherence factor A precursor 35 0.15
sp|P54677|PI4K_DICDI Phosphatidylinositol 4-kinase (PI4-kin... 33 0.44
sp|Q17060|MRJP3_APIME Major royal jelly protein 3 precursor... 33 0.44
sp|O43952|TGP1_TETTH G-quartet DNA binding protein TGP1 33 0.44
sp|P34756|FAB1_YEAST 1-phosphatidylinositol-3-phosphate 5-k... 33 0.58
sp|P14196|AAC2_DICDI AAC-rich mRNA clone AAC11 protein 32 1.3
sp|Q22366|RIM_CAEEL Rab-3 interacting molecule unc-10 (Rim)... 32 1.7
sp|P72186|PLS_PYRFU Pyrolysin precursor 31 2.9
sp|P54673|PI3K1_DICDI Phosphatidylinositol 3-kinase 1 (PI3-... 30 3.8
>sp|P04931|ARP_PLAFA Asparagine-rich protein (AG319) (ARP)
Length = 537
Score = 36.2 bits (82), Expect = 0.068
Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 9/165 (5%)
Frame = +2
Query: 23 FISNRQDKPGRNV---GHNQNMNVKN-YSKHENTSQNGNLRNVDSVPLLKRQPDQYRQID 190
F+ N + +N G N N++ KN Y + ++ +N + D+ +K +
Sbjct: 89 FMENENENENKNYHTGGMNNNIHFKNKYDNNNSSMKNTDNNKTDTSYNMKGTINNDNNNM 148
Query: 191 KY--NVENLLQSFGRNVSXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQNG-- 358
Y N+ N+ + G + + + + NN NG
Sbjct: 149 DYLRNINNINEYKGSAKNKFYTNYMNKNNLKFTQNNNDNMNINEDNNNNNNNNNNNNGVF 208
Query: 359 -NVQNFSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLN 490
N QN + N+N ++N +NN++ + ++ DKN N
Sbjct: 209 SNYQNNNMNRNNSINIKRNLNNNNNINNNMNKMGSQDKNQNSNNN 253
Score = 31.2 bits (69), Expect = 2.2
Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 6/163 (3%)
Frame = +2
Query: 2 KASEKGHFISNRQDKPGRNVGHNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYR 181
K S K F +N +K N+ QN N N + +E+ + N N N ++ Q +
Sbjct: 161 KGSAKNKFYTNYMNK--NNLKFTQNNN-DNMNINEDNNNNNNNNNNNNGVFSNYQNNNMN 217
Query: 182 QIDKYNVENLL---QSFGRNVSXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQ 352
+ + N++ L + N++ KN + + +NN
Sbjct: 218 RNNSINIKRNLNNNNNINNNMNKMGSQDKNQNSNNNFYMNYNYQNRKNSMNNNMNNNMNN 277
Query: 353 NGN---VQNFSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKN 472
N N N + N N +N N N + + + LD +
Sbjct: 278 NMNHNMNNNMNHNMNNNMNHNMNNNMNHNMNNNMNNINSLDSD 320
Score = 31.2 bits (69), Expect = 2.2
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 314 NEVRSKINNGPYQNGNVQNF-SKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNN 475
N + S +NN N++N S+NKN A N ND +NN+ ++ NN
Sbjct: 403 NNMNSAVNNNSSNGNNMKNENSENKNVADN-NDSLNNNKNNNNNINMNESINNNN 456
Score = 29.6 bits (65), Expect = 6.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 335 NNGPYQNGNVQNFSKNKNEAVNKNDKINNDSRLRGQ 442
NN N N + N NE++N N+ +NN++ Q
Sbjct: 432 NNDSLNNNKNNNNNINMNESINNNNTLNNNNEYNNQ 467
>sp|Q4A0V8|UAFA_STAS1 Uro-adherence factor A precursor
Length = 2316
Score = 35.0 bits (79), Expect = 0.15
Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 1/143 (0%)
Frame = +2
Query: 2 KASEKGHFISNRQDKPGRNVGHNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYR 181
K+SE N QD + H +N+ K E+ + +++ + ++ +
Sbjct: 106 KSSEYDQKPINEQDTSNHHETHLNQNATENHVKEESKEVSTEEESIEDRKTEESTTEESK 165
Query: 182 QIDKYNVENLLQSFGR-NVSXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQNG 358
+++ N EN + ++ + + +K+ + Y+N
Sbjct: 166 AVEEANKENTTEKNDEGSLDLEKEKDTYKDEKDNGKKKNELESHNHRIENKVEDNVYKNN 225
Query: 359 NVQNFSKNKNEAVNKNDKINNDS 427
N ++KNE VNK+DK+N S
Sbjct: 226 KETNL-ESKNENVNKDDKVNTSS 247
>sp|P54677|PI4K_DICDI Phosphatidylinositol 4-kinase (PI4-kinase) (PtdIns-4-kinase)
(PI4K-alpha)
Length = 1093
Score = 33.5 bits (75), Expect = 0.44
Identities = 35/165 (21%), Positives = 57/165 (34%)
Frame = +2
Query: 11 EKGHFISNRQDKPGRNVGHNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYRQID 190
E H I N K + +N N N S +++ + N L N +S + + +QY
Sbjct: 170 ENDHHIENDPKKDINSNNNNNNNINNNNSNNDDNNNNEILPNENSDNSINDENNQY---G 226
Query: 191 KYNVENLLQSFGRNVSXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQNGNVQN 370
N N + N+ K S I + N N N
Sbjct: 227 NSNNNNNISGENNNIKIDINSQNKSDSNIETLNSTLCEETKT---SPIKDDMENNNNNNN 283
Query: 371 FSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLNKGDVH 505
+ N N N N+ INN++ + + NN +N G ++
Sbjct: 284 NNNNNNNNNNNNNNINNNN--------INNNNINNNNNINYGHIN 320
>sp|Q17060|MRJP3_APIME Major royal jelly protein 3 precursor (MRJP-3) (Bee-milk protein)
(Royal jelly protein RJP57-1)
Length = 544
Score = 33.5 bits (75), Expect = 0.44
Identities = 37/152 (24%), Positives = 54/152 (35%)
Frame = +2
Query: 65 HNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYRQIDKYNVENLLQSFGRNVSXX 244
HNQN +N +QN N +N D+ K+ + RQ D +N +N +
Sbjct: 423 HNQNAGNQNADNQNADNQNANNQNADNQNANKQNGN--RQNDNRQNDNKQNGNRQNDNKQ 480
Query: 245 XXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQNGNVQNFSKNKNEAVNKNDKINND 424
N NG QNGN QN +K +N ND
Sbjct: 481 NG---------------------NRQNDNKQNGNRQNGNKQNDNK-------QNGNRQND 512
Query: 425 SRLRGQAAQLRQLDKNNGGQLNKGDVHVLDKL 520
++ G Q ++N+ + N VH KL
Sbjct: 513 NKRNGNRQNDNQNNQNDNNR-NDNQVHHSSKL 543
>sp|O43952|TGP1_TETTH G-quartet DNA binding protein TGP1
Length = 725
Score = 33.5 bits (75), Expect = 0.44
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +2
Query: 335 NNGP--YQNGNVQNFSKNKNE----AVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLN 490
NN P Y+N +VQN + NKN+ + N+ N D+R G+ RQ ++NN N
Sbjct: 513 NNQPNKYKNTSVQNNNNNKNQQRSQSQNQRPPRNYDNRQGGENRNNRQRNENNRNNFN 570
Score = 30.0 bits (66), Expect = 4.9
Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 1/158 (0%)
Frame = +2
Query: 32 NRQDKPGRNVGHNQN-MNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYRQIDKYNVEN 208
N Q N H+QN N +N KH N+ N QP++Y+ +V+N
Sbjct: 484 NHQGGQRGNRSHSQNNRNQRNRDKHHNSQNN--------------QPNKYKNT---SVQN 526
Query: 209 LLQSFGRNVSXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQNGNVQNFSKNKN 388
+ + S +NE NG N QN +N+N
Sbjct: 527 NNNNKNQQRSQSQNQRPPRNYDNRQGGENRNNRQRNENNRNNFNGNGHRVNNQNNQRNRN 586
Query: 389 EAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLNKGDV 502
+ +N NN Q + L+ GQ G V
Sbjct: 587 SSYPRN---NNYDHHHNQQTDISGLEPGKRGQNVTGQV 621
>sp|P34756|FAB1_YEAST 1-phosphatidylinositol-3-phosphate 5-kinase FAB1
(Phosphatidylinositol-3-phosphate 5-kinase) (Type III
PIP kinase)
Length = 2278
Score = 33.1 bits (74), Expect = 0.58
Identities = 35/154 (22%), Positives = 48/154 (31%), Gaps = 3/154 (1%)
Frame = +2
Query: 65 HNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYRQIDKYNVENLLQSFGRNVSXX 244
+N N N S + NT+ N N+ N R I Y N + N S
Sbjct: 475 NNLNNTTSNNSNYNNTNSNSNINNPAH--------SLRRSIFHYVSSNSVNKDSNNSSAT 526
Query: 245 XXXXXXXXXXXXXXXXXXXXXVKNEVRSKIN---NGPYQNGNVQNFSKNKNEAVNKNDKI 415
+ K N GP Q + N + + N N N+
Sbjct: 527 PASSAQSSSILDPANRIIGNYAHRNYKFKFNYNSKGPSQQNDTANGNNDNNNNNNNNNNN 586
Query: 416 NNDSRLRGQAAQLRQLDKNNGGQLNKGDVHVLDK 517
NN++ G A D NN + G LDK
Sbjct: 587 NNNNSASGIA------DNNNIPSNDNGTTFTLDK 614
>sp|P14196|AAC2_DICDI AAC-rich mRNA clone AAC11 protein
Length = 448
Score = 32.0 bits (71), Expect = 1.3
Identities = 15/62 (24%), Positives = 24/62 (38%)
Frame = +2
Query: 314 NEVRSKINNGPYQNGNVQNFSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLNK 493
N + + NN N N N + N N + N N NN++ ++ NN N
Sbjct: 283 NNINNNNNNNSNNNNNSSNNNNNNNNSTNNNTNNNNNNTNNNTNNNNNNINNNNNNTNNN 342
Query: 494 GD 499
+
Sbjct: 343 NN 344
>sp|Q22366|RIM_CAEEL Rab-3 interacting molecule unc-10 (Rim) (Uncoordinated protein 10)
Length = 1563
Score = 31.6 bits (70), Expect = 1.7
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 335 NNGPYQNGN---VQNFSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLNK 493
N P QN N +QN +N+N N + NN + +A Q + + +N Q+N+
Sbjct: 206 NQHPNQNHNQNQMQNPHQNQNHVQNNHQGANNHQQNNRRAMQQQPMSQNQANQINQ 261
>sp|P72186|PLS_PYRFU Pyrolysin precursor
Length = 1398
Score = 30.8 bits (68), Expect = 2.9
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Frame = -3
Query: 590 NTLFSFSRFTQSLRFCR--FEIGL*IIYLKRVHLLYSVVHHYFYQVVAAGRLVLSNGNHC 417
+T FSFS+ F++ + + L+ VV + V G + +NG
Sbjct: 212 DTSFSFSKVVNGTLIINTTFQVASGLTLNESTGLMEYVVKTVYVSNVTIGNITSANG--- 268
Query: 416 *FYHFY*LPRFYFSKNFEHSHFD 348
YHF LP YF NF+ D
Sbjct: 269 -IYHFGLLPERYFDLNFDGDQED 290
>sp|P54673|PI3K1_DICDI Phosphatidylinositol 3-kinase 1 (PI3-kinase) (PtdIns-3-kinase)
(PI3K)
Length = 1570
Score = 30.4 bits (67), Expect = 3.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 311 KNEVRSKINNGPYQNGNVQNFSKNKNEAVNKNDKINNDSRL 433
KN S NN + N + NKN N ND NN++ +
Sbjct: 34 KNNSTSSNNNNNHNNIEIIGIDNNKNNNKNNNDNNNNNNNI 74
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,079,131
Number of Sequences: 369166
Number of extensions: 1080319
Number of successful extensions: 4325
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3764
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4846822695
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)