Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_P22
(651 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P92176|ACT2_LUMTE Actin-2 435 e-122
sp|P91754|ACT_LUMRU Actin 435 e-122
sp|P92182|ACT1_LUMTE Actin-1 435 e-122
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 434 e-122
sp|Q26065|ACT_PLAMG Actin, adductor muscle 434 e-122
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 434 e-121
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 434 e-121
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 434 e-121
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 434 e-121
sp|P10984|ACT2_CAEEL Actin-2 433 e-121
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 435 bits (1119), Expect = e-122
Identities = 212/217 (97%), Positives = 215/217 (99%)
Frame = +1
Query: 1 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 180
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 181 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 360
IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYV
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 135
Query: 361 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 540
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Query: 541 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS 651
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TAS
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTAS 232
>sp|P91754|ACT_LUMRU Actin
Length = 372
Score = 435 bits (1118), Expect = e-122
Identities = 212/217 (97%), Positives = 215/217 (99%)
Frame = +1
Query: 1 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 180
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 12 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 71
Query: 181 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 360
IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYV
Sbjct: 72 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 131
Query: 361 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 540
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT
Sbjct: 132 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 191
Query: 541 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS 651
ERGYSFTTTAEREIVRDIKEKLCY+ALDFD EM TA+
Sbjct: 192 ERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMGTAA 228
>sp|P92182|ACT1_LUMTE Actin-1
Length = 376
Score = 435 bits (1118), Expect = e-122
Identities = 212/217 (97%), Positives = 215/217 (99%)
Frame = +1
Query: 1 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 180
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 181 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 360
IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYV
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYV 135
Query: 361 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 540
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Query: 541 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS 651
ERGYSFTTTAEREIVRDIKEKLCY+ALDFD EM TA+
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMGTAA 232
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 434 bits (1117), Expect = e-122
Identities = 211/217 (97%), Positives = 215/217 (99%)
Frame = +1
Query: 1 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 180
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 181 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 360
IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 135
Query: 361 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 540
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 195
Query: 541 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS 651
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAS 232
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 434 bits (1117), Expect = e-122
Identities = 212/217 (97%), Positives = 215/217 (99%)
Frame = +1
Query: 1 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 180
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 181 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 360
IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 135
Query: 361 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 540
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Query: 541 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS 651
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA+
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFENEMATAA 232
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 434 bits (1115), Expect = e-121
Identities = 210/217 (96%), Positives = 215/217 (99%)
Frame = +1
Query: 1 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 180
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 181 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 360
IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 135
Query: 361 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 540
AIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 195
Query: 541 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS 651
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAS 232
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 434 bits (1115), Expect = e-121
Identities = 210/217 (96%), Positives = 215/217 (99%)
Frame = +1
Query: 1 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 180
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 181 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 360
IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 135
Query: 361 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 540
AIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 195
Query: 541 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS 651
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAS 232
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 434 bits (1115), Expect = e-121
Identities = 210/217 (96%), Positives = 215/217 (99%)
Frame = +1
Query: 1 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 180
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 181 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 360
IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 135
Query: 361 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 540
AIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 195
Query: 541 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS 651
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAS 232
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 434 bits (1115), Expect = e-121
Identities = 211/217 (97%), Positives = 214/217 (98%)
Frame = +1
Query: 1 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 180
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 15 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 74
Query: 181 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 360
IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV
Sbjct: 75 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 134
Query: 361 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 540
AIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT
Sbjct: 135 AIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 194
Query: 541 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS 651
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TAS
Sbjct: 195 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAS 231
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 433 bits (1114), Expect = e-121
Identities = 211/217 (97%), Positives = 214/217 (98%)
Frame = +1
Query: 1 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 180
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 181 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYV 360
IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 135
Query: 361 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 540
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Query: 541 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS 651
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA+
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 232
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,011,261
Number of Sequences: 369166
Number of extensions: 1604047
Number of successful extensions: 5534
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5446
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5365037700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)