Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_P21
(827 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P50395|GDIB_HUMAN Rab GDP dissociation inhibitor beta (R... 318 1e-86
sp|Q5RCE1|GDIB_PONPY Rab GDP dissociation inhibitor beta (R... 318 1e-86
sp|P50398|GDIA_RAT Rab GDP dissociation inhibitor alpha (Ra... 317 3e-86
sp|Q8HXX7|GDIA_MACFA Rab GDP dissociation inhibitor alpha (... 317 3e-86
sp|Q7YQM0|GDIA_PONPY Rab GDP dissociation inhibitor alpha (... 317 3e-86
sp|P50397|GDIB_BOVIN Rab GDP dissociation inhibitor beta (R... 317 3e-86
sp|P60028|GDIA_PANTR Rab GDP dissociation inhibitor alpha (... 316 4e-86
sp|Q6Q7J2|GDIB_PIG Rab GDP dissociation inhibitor beta (Rab... 315 1e-85
sp|P50396|GDIA_MOUSE Rab GDP dissociation inhibitor alpha (... 314 2e-85
sp|P21856|GDIA_BOVIN Rab GDP dissociation inhibitor alpha (... 314 2e-85
>sp|P50395|GDIB_HUMAN Rab GDP dissociation inhibitor beta (Rab GDI beta) (Guanosine
diphosphate dissociation inhibitor 2) (GDI-2)
Length = 445
Score = 318 bits (814), Expect = 1e-86
Identities = 159/275 (57%), Positives = 203/275 (73%)
Frame = +3
Query: 3 ESLGRGRDWNVDLIPKFLMADGALVKLLIHTGVTRYLEFKSIEGSYVYKQGSIFKVPCDE 182
ES+GRGRDWNVDLIPKFLMA+G LVK+L++T VTRYL+FK EGS+VYK G I+KVP E
Sbjct: 64 ESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPSTE 123
Query: 183 KEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYDHFGVDRNT 362
EALA+SLMG+FEKRRFRK L++ +FD P T++ + +P+ T+R +Y F + ++
Sbjct: 124 AEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGI--DPKKTTMRDVYKKFDLGQDV 181
Query: 363 QDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXXXXXXXFAR 542
DF GHA+ +Y DDY+D+ E I R++LYS SLAR FAR
Sbjct: 182 IDFTGHALALYRTDDYLDQ-PCYETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR 240
Query: 543 LSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKVKKIGSVIR 722
LSA++GGTYMLNK E+I+ ++GKVIGV++EGE+ARCK +ICDP YVKD+V+K+G VIR
Sbjct: 241 LSAIYGGTYMLNKPIEEIIV-QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIR 299
Query: 723 AICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYV 827
ICIL+HP+ NTN A S QIIIPQNQVNR DIYV
Sbjct: 300 VICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
>sp|Q5RCE1|GDIB_PONPY Rab GDP dissociation inhibitor beta (Rab GDI beta) (Guanosine
diphosphate dissociation inhibitor 2) (GDI-2)
Length = 445
Score = 318 bits (814), Expect = 1e-86
Identities = 159/275 (57%), Positives = 203/275 (73%)
Frame = +3
Query: 3 ESLGRGRDWNVDLIPKFLMADGALVKLLIHTGVTRYLEFKSIEGSYVYKQGSIFKVPCDE 182
ES+GRGRDWNVDLIPKFLMA+G LVK+L++T VTRYL+FK EGS+VYK G I+KVP E
Sbjct: 64 ESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPSTE 123
Query: 183 KEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYDHFGVDRNT 362
EALA+SLMG+FEKRRFRK L++ +FD P T++ + +P+ T+R +Y F + ++
Sbjct: 124 AEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGI--DPKKTTMRDVYKKFDLGQDV 181
Query: 363 QDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXXXXXXXFAR 542
DF GHA+ +Y DDY+D+ E I R++LYS SLAR FAR
Sbjct: 182 IDFTGHALALYRTDDYLDQ-PCYETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR 240
Query: 543 LSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKVKKIGSVIR 722
LSA++GGTYMLNK E+I+ ++GKVIGV++EGE+ARCK +ICDP YVKD+V+K+G VIR
Sbjct: 241 LSAIYGGTYMLNKPIEEIIV-QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIR 299
Query: 723 AICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYV 827
ICIL+HP+ NTN A S QIIIPQNQVNR DIYV
Sbjct: 300 VICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
>sp|P50398|GDIA_RAT Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1)
Length = 447
Score = 317 bits (811), Expect = 3e-86
Identities = 159/275 (57%), Positives = 204/275 (74%)
Frame = +3
Query: 3 ESLGRGRDWNVDLIPKFLMADGALVKLLIHTGVTRYLEFKSIEGSYVYKQGSIFKVPCDE 182
ES+GRGRDWNVDLIPKFLMA+G LVK+L++T VTRYL+FK +EGS+VYK G I+KVP E
Sbjct: 64 ESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTE 123
Query: 183 KEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYDHFGVDRNT 362
EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+T ++R +Y F + ++
Sbjct: 124 TEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQTTSMRDVYRKFDLGQDV 181
Query: 363 QDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXXXXXXXFAR 542
DF GHA+ +Y DDY+D+ E I R++LYS SLAR FAR
Sbjct: 182 IDFTGHALALYRTDDYLDQPCL-ETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR 240
Query: 543 LSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKVKKIGSVIR 722
LSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP Y+ D+V+K G VIR
Sbjct: 241 LSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIR 299
Query: 723 AICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYV 827
ICIL+HP+ NTN A S QIIIPQNQVNR DIYV
Sbjct: 300 IICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
>sp|Q8HXX7|GDIA_MACFA Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1)
Length = 447
Score = 317 bits (811), Expect = 3e-86
Identities = 159/275 (57%), Positives = 204/275 (74%)
Frame = +3
Query: 3 ESLGRGRDWNVDLIPKFLMADGALVKLLIHTGVTRYLEFKSIEGSYVYKQGSIFKVPCDE 182
ES+GRGRDWNVDLIPKFLMA+G LVK+L++T VTRYL+FK +EGS+VYK G I+KVP E
Sbjct: 64 ESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTE 123
Query: 183 KEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYDHFGVDRNT 362
EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+T ++R +Y F + ++
Sbjct: 124 TEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQTTSMRDVYRKFDLGQDV 181
Query: 363 QDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXXXXXXXFAR 542
DF GHA+ +Y DDY+D+ E I R++LYS SLAR FAR
Sbjct: 182 IDFTGHALALYRTDDYLDQPCL-ETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR 240
Query: 543 LSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKVKKIGSVIR 722
LSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP Y+ D+V+K G VIR
Sbjct: 241 LSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIR 299
Query: 723 AICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYV 827
ICIL+HP+ NTN A S QIIIPQNQVNR DIYV
Sbjct: 300 IICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
>sp|Q7YQM0|GDIA_PONPY Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1)
Length = 447
Score = 317 bits (811), Expect = 3e-86
Identities = 159/275 (57%), Positives = 204/275 (74%)
Frame = +3
Query: 3 ESLGRGRDWNVDLIPKFLMADGALVKLLIHTGVTRYLEFKSIEGSYVYKQGSIFKVPCDE 182
ES+GRGRDWNVDLIPKFLMA+G LVK+L++T VTRYL+FK +EGS+VYK G I+KVP E
Sbjct: 64 ESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTE 123
Query: 183 KEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYDHFGVDRNT 362
EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+T ++R +Y F + ++
Sbjct: 124 TEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQTTSMRDVYRKFDLGQDV 181
Query: 363 QDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXXXXXXXFAR 542
DF GHA+ +Y DDY+D+ E I R++LYS SLAR FAR
Sbjct: 182 IDFTGHALALYRTDDYLDQPCL-ETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR 240
Query: 543 LSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKVKKIGSVIR 722
LSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP Y+ D+V+K G VIR
Sbjct: 241 LSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIR 299
Query: 723 AICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYV 827
ICIL+HP+ NTN A S QIIIPQNQVNR DIYV
Sbjct: 300 IICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
>sp|P50397|GDIB_BOVIN Rab GDP dissociation inhibitor beta (Rab GDI beta) (Guanosine
diphosphate dissociation inhibitor 2) (GDI-2)
Length = 445
Score = 317 bits (811), Expect = 3e-86
Identities = 158/274 (57%), Positives = 203/274 (74%)
Frame = +3
Query: 6 SLGRGRDWNVDLIPKFLMADGALVKLLIHTGVTRYLEFKSIEGSYVYKQGSIFKVPCDEK 185
S+GRGRDWNVDLIPKFLMA+G LVK+L+ T VTRYL+FK EGS+VYK G I+KVP E
Sbjct: 65 SMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEA 124
Query: 186 EALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYDHFGVDRNTQ 365
EALA+SLMG+FEKRRFRK L++ +FD N P T++ + +P+ ++R++Y F + ++
Sbjct: 125 EALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGI--DPKKTSMREVYKKFDLGQDVI 182
Query: 366 DFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXXXXXXXFARL 545
DF GHA+ +Y DDY+D+ E I R++LYS SLAR FARL
Sbjct: 183 DFTGHALALYRTDDYLDQPCC-ETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARL 241
Query: 546 SAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKVKKIGSVIRA 725
SA++GGTYMLNK E+I+ ++GKVIGV++EGE+ARCK +ICDP YVKD+V+K+G VIR
Sbjct: 242 SAIYGGTYMLNKPIEEIIM-QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRV 300
Query: 726 ICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYV 827
ICIL+HP+ NTN A S QIIIPQNQVNR DIYV
Sbjct: 301 ICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
>sp|P60028|GDIA_PANTR Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1)
sp|P31150|GDIA_HUMAN Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1) (XAP-4)
(Oligophrenin-2)
Length = 447
Score = 316 bits (810), Expect = 4e-86
Identities = 158/275 (57%), Positives = 204/275 (74%)
Frame = +3
Query: 3 ESLGRGRDWNVDLIPKFLMADGALVKLLIHTGVTRYLEFKSIEGSYVYKQGSIFKVPCDE 182
ES+GRGRDWNVDLIPKFLMA+G LVK+L++T VTRYL+FK +EGS+VYK G I+KVP E
Sbjct: 64 ESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTE 123
Query: 183 KEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYDHFGVDRNT 362
EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+T ++R +Y F + ++
Sbjct: 124 TEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQTTSMRDVYRKFDLGQDV 181
Query: 363 QDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXXXXXXXFAR 542
DF GHA+ +Y DDY+D+ E + R++LYS SLAR FAR
Sbjct: 182 IDFTGHALALYRTDDYLDQPCL-ETVNRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR 240
Query: 543 LSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKVKKIGSVIR 722
LSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP Y+ D+V+K G VIR
Sbjct: 241 LSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIR 299
Query: 723 AICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYV 827
ICIL+HP+ NTN A S QIIIPQNQVNR DIYV
Sbjct: 300 IICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
>sp|Q6Q7J2|GDIB_PIG Rab GDP dissociation inhibitor beta (Rab GDI beta) (Guanosine
diphosphate dissociation inhibitor 2) (GDI-2)
Length = 445
Score = 315 bits (806), Expect = 1e-85
Identities = 158/274 (57%), Positives = 202/274 (73%)
Frame = +3
Query: 6 SLGRGRDWNVDLIPKFLMADGALVKLLIHTGVTRYLEFKSIEGSYVYKQGSIFKVPCDEK 185
S+GRGRDWNVDLIPKFLMA+G LVK+L+ T VTRYL+FK EGS+VYK G I+KVP E
Sbjct: 65 SMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEA 124
Query: 186 EALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYDHFGVDRNTQ 365
EALA+SLMG+FEKRRFRK L++ +FD N P T++ V +P+ +R++Y F + ++
Sbjct: 125 EALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGV--DPKKTAMREVYKKFDLGQDVI 182
Query: 366 DFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXXXXXXXFARL 545
DF GHA+ +Y DDY+D+ E I R++LYS SLAR FARL
Sbjct: 183 DFTGHALALYRTDDYLDQPCC-ETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFARL 241
Query: 546 SAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKVKKIGSVIRA 725
SA++GGTYMLNK E+I+ ++GKVIGV++EGE+ARCK +ICDP YVKD+V+K+G VIR
Sbjct: 242 SAIYGGTYMLNKPIEEIIV-QNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRV 300
Query: 726 ICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYV 827
ICIL+HP+ NT+ A S QIIIPQNQVNR DIYV
Sbjct: 301 ICILSHPIKNTSDANSCQIIIPQNQVNRKSDIYV 334
>sp|P50396|GDIA_MOUSE Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1)
Length = 447
Score = 314 bits (805), Expect = 2e-85
Identities = 158/275 (57%), Positives = 203/275 (73%)
Frame = +3
Query: 3 ESLGRGRDWNVDLIPKFLMADGALVKLLIHTGVTRYLEFKSIEGSYVYKQGSIFKVPCDE 182
ES+GRGRDWNVDLIPKFLMA+G LVK+L++T VTRYL+FK +EGS+VYK G I+KVP E
Sbjct: 64 ESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTE 123
Query: 183 KEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYDHFGVDRNT 362
EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+ ++R +Y F + ++
Sbjct: 124 TEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQNTSMRDVYRKFDLGQDV 181
Query: 363 QDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXXXXXXXFAR 542
DF GHA+ +Y DDY+D+ E I R++LYS SLAR FAR
Sbjct: 182 IDFTGHALALYRTDDYLDQPCL-ETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR 240
Query: 543 LSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKVKKIGSVIR 722
LSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP Y+ D+V+K G VIR
Sbjct: 241 LSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVQKAGQVIR 299
Query: 723 AICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYV 827
ICIL+HP+ NTN A S QIIIPQNQVNR DIYV
Sbjct: 300 IICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
>sp|P21856|GDIA_BOVIN Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1) (SMG p25A
GDI)
Length = 447
Score = 314 bits (804), Expect = 2e-85
Identities = 158/275 (57%), Positives = 203/275 (73%)
Frame = +3
Query: 3 ESLGRGRDWNVDLIPKFLMADGALVKLLIHTGVTRYLEFKSIEGSYVYKQGSIFKVPCDE 182
E++GRGRDWNVDLIPKFLMA+G LVK+L++T VTRYL+FK +EGS+VYK G I+KVP E
Sbjct: 64 ETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTE 123
Query: 183 KEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYDHFGVDRNT 362
EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+ ++R +Y F + ++
Sbjct: 124 TEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQNTSMRDVYRKFDLGQDV 181
Query: 363 QDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXXXXXXXFAR 542
DF GHA+ +Y DDY+D+ E I R++LYS SLAR FAR
Sbjct: 182 IDFTGHALALYRTDDYLDQPCL-ETINRIKLYSESLARYGKSPYLYPLYGLGELPQGFAR 240
Query: 543 LSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKVKKIGSVIR 722
LSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP YV D+V+K G VIR
Sbjct: 241 LSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYVPDRVRKAGQVIR 299
Query: 723 AICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYV 827
ICIL+HP+ NTN A S QIIIPQNQVNR DIYV
Sbjct: 300 IICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,566,588
Number of Sequences: 369166
Number of extensions: 2101333
Number of successful extensions: 6231
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6163
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8004331590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)