Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_P20
(633 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9NYU2|UGGG1_HUMAN UDP-glucose:glycoprotein glucosyltran... 276 3e-74
sp|Q9JLA3|UGGG1_RAT UDP-glucose:glycoprotein glucosyltransf... 275 7e-74
sp|Q6P5E4|UGGG1_MOUSE UDP-glucose:glycoprotein glucosyltran... 275 7e-74
sp|Q9NYU1|UGGG2_HUMAN UDP-glucose:glycoprotein glucosyltran... 251 8e-67
sp|Q09332|UGGG_DROME UDP-glucose:glycoprotein glucosyltrans... 251 1e-66
sp|Q09140|UGGG_SCHPO UDP-glucose:glycoprotein glucosyltrans... 226 3e-59
sp|P22023|KRE5_YEAST Killer toxin-resistance protein 5 prec... 63 7e-10
sp|O21078|NU2M_MYXGL NADH-ubiquinone oxidoreductase chain 2... 31 2.3
sp|P03893|NU2M_MOUSE NADH-ubiquinone oxidoreductase chain 2... 31 2.3
sp|O83802|TRUA_TREPA tRNA pseudouridine synthase A (tRNA-ur... 31 3.0
>sp|Q9NYU2|UGGG1_HUMAN UDP-glucose:glycoprotein glucosyltransferase 1 precursor (UDP-glucose
ceramide glucosyltransferase-like 1)
(UDP--Glc:glycoprotein glucosyltransferase) (HUGT1)
Length = 1531
Score = 276 bits (706), Expect = 3e-74
Identities = 128/173 (73%), Positives = 141/173 (81%), Gaps = 9/173 (5%)
Frame = +2
Query: 2 DLDLEGAPYGYTPFCSSKPEMDGFRFWKSGYWSQHLAGRPYHISALYVVDLNRFRMMAAG 181
D +L+GAPYGYTPFC S+ EMDG+RFWKSGYW+ HLAGR YHISALYVVDL +FR +AAG
Sbjct: 1348 DFNLDGAPYGYTPFCDSRREMDGYRFWKSGYWASHLAGRKYHISALYVVDLKKFRKIAAG 1407
Query: 182 DRLRGQYHGLSQDPNSLANLDQDLPNNMIHQVPIKSLPQEWLWCETWCSAEEKVKAKTID 361
DRLRGQY GLSQDPNSL+NLDQDLPNNMIHQVPIKSLPQEWLWCETWC K +AKTID
Sbjct: 1408 DRLRGQYQGLSQDPNSLSNLDQDLPNNMIHQVPIKSLPQEWLWCETWCDDASKKRAKTID 1467
Query: 362 LCNNPMTKEPKLSAAMRILPEWNGYDREIKGL---------WNEVYSLKPKEP 493
LCNNPMTKEPKL AA+RI+PEW YD+EIK L +Y K KEP
Sbjct: 1468 LCNNPMTKEPKLEAAVRIVPEWQDYDQEIKQLQIRFQKEKETGALYKEKTKEP 1520
>sp|Q9JLA3|UGGG1_RAT UDP-glucose:glycoprotein glucosyltransferase 1 precursor (UDP-glucose
ceramide glucosyltransferase-like 1)
(UDP--Glc:glycoprotein glucosyltransferase) (RUGT)
Length = 1527
Score = 275 bits (703), Expect = 7e-74
Identities = 123/152 (80%), Positives = 135/152 (88%)
Frame = +2
Query: 2 DLDLEGAPYGYTPFCSSKPEMDGFRFWKSGYWSQHLAGRPYHISALYVVDLNRFRMMAAG 181
D +L+GAPYGYTPFC S+ EMDG+RFWKSGYW+ HLAGR YHISALYVVDL +FR +AAG
Sbjct: 1348 DFNLDGAPYGYTPFCDSRREMDGYRFWKSGYWASHLAGRKYHISALYVVDLKKFRKIAAG 1407
Query: 182 DRLRGQYHGLSQDPNSLANLDQDLPNNMIHQVPIKSLPQEWLWCETWCSAEEKVKAKTID 361
DRLRGQY GLSQDPNSL+NLDQDLPNNMIHQVPIKSLPQEWLWCETWC K +AKTID
Sbjct: 1408 DRLRGQYQGLSQDPNSLSNLDQDLPNNMIHQVPIKSLPQEWLWCETWCDDASKKRAKTID 1467
Query: 362 LCNNPMTKEPKLSAAMRILPEWNGYDREIKGL 457
LCNNPMTKEPKL AA+RI+PEW YD+EIK L
Sbjct: 1468 LCNNPMTKEPKLEAAVRIVPEWQDYDQEIKQL 1499
>sp|Q6P5E4|UGGG1_MOUSE UDP-glucose:glycoprotein glucosyltransferase 1 precursor (UDP-glucose
ceramide glucosyltransferase-like 1)
(UDP--Glc:glycoprotein glucosyltransferase)
Length = 1527
Score = 275 bits (703), Expect = 7e-74
Identities = 123/152 (80%), Positives = 135/152 (88%)
Frame = +2
Query: 2 DLDLEGAPYGYTPFCSSKPEMDGFRFWKSGYWSQHLAGRPYHISALYVVDLNRFRMMAAG 181
D +L+GAPYGYTPFC S+ EMDG+RFWKSGYW+ HLAGR YHISALYVVDL +FR +AAG
Sbjct: 1348 DFNLDGAPYGYTPFCDSRREMDGYRFWKSGYWASHLAGRKYHISALYVVDLKKFRKIAAG 1407
Query: 182 DRLRGQYHGLSQDPNSLANLDQDLPNNMIHQVPIKSLPQEWLWCETWCSAEEKVKAKTID 361
DRLRGQY GLSQDPNSL+NLDQDLPNNMIHQVPIKSLPQEWLWCETWC K +AKTID
Sbjct: 1408 DRLRGQYQGLSQDPNSLSNLDQDLPNNMIHQVPIKSLPQEWLWCETWCDDASKKRAKTID 1467
Query: 362 LCNNPMTKEPKLSAAMRILPEWNGYDREIKGL 457
LCNNPMTKEPKL AA+RI+PEW YD+EIK L
Sbjct: 1468 LCNNPMTKEPKLEAAVRIVPEWQDYDQEIKQL 1499
>sp|Q9NYU1|UGGG2_HUMAN UDP-glucose:glycoprotein glucosyltransferase 2 precursor (UDP-glucose
ceramide glucosyltransferase-like 1)
(UDP--Glc:glycoprotein glucosyltransferase 2) (HUGT2)
Length = 1516
Score = 251 bits (642), Expect = 8e-67
Identities = 114/160 (71%), Positives = 130/160 (81%)
Frame = +2
Query: 2 DLDLEGAPYGYTPFCSSKPEMDGFRFWKSGYWSQHLAGRPYHISALYVVDLNRFRMMAAG 181
D DL+GAPYGYTPFC S+ EMDG+RFWK+GYW+ HL R YHISALYVVDL +FR + AG
Sbjct: 1347 DFDLDGAPYGYTPFCDSRREMDGYRFWKTGYWASHLLRRKYHISALYVVDLKKFRRIGAG 1406
Query: 182 DRLRGQYHGLSQDPNSLANLDQDLPNNMIHQVPIKSLPQEWLWCETWCSAEEKVKAKTID 361
DRLR QY LSQDPNSL+NLDQDLPNNMI+QV IKSLPQ+WLWCETWC E K +AKTID
Sbjct: 1407 DRLRSQYQALSQDPNSLSNLDQDLPNNMIYQVAIKSLPQDWLWCETWCDDESKQRAKTID 1466
Query: 362 LCNNPMTKEPKLSAAMRILPEWNGYDREIKGLWNEVYSLK 481
LCNNP TKE KL AA RI+PEW YD EI+ L + + + K
Sbjct: 1467 LCNNPKTKESKLKAAARIVPEWVEYDAEIRQLLDHLENKK 1506
>sp|Q09332|UGGG_DROME UDP-glucose:glycoprotein glucosyltransferase precursor
(UDP--Glc:glycoprotein glucosyltransferase) (dUGT)
Length = 1548
Score = 251 bits (641), Expect = 1e-66
Identities = 113/156 (72%), Positives = 125/156 (80%)
Frame = +2
Query: 2 DLDLEGAPYGYTPFCSSKPEMDGFRFWKSGYWSQHLAGRPYHISALYVVDLNRFRMMAAG 181
D+DL GAPY YTPFC S+ EM+GFRFWK GYW HL GR YHISALYVVDL RFR +AAG
Sbjct: 1356 DMDLGGAPYAYTPFCDSRKEMEGFRFWKQGYWRSHLMGRRYHISALYVVDLKRFRKIAAG 1415
Query: 182 DRLRGQYHGLSQDPNSLANLDQDLPNNMIHQVPIKSLPQEWLWCETWCSAEEKVKAKTID 361
DRLRGQY LSQDPNSL+NLDQDLPNNMIHQV IKSLP +WLWC+TWCS AK ID
Sbjct: 1416 DRLRGQYQALSQDPNSLSNLDQDLPNNMIHQVAIKSLPDDWLWCQTWCSDSNFKTAKVID 1475
Query: 362 LCNNPMTKEPKLSAAMRILPEWNGYDREIKGLWNEV 469
LCNNP TKE KL+AA RI+PEW YD E+K L + +
Sbjct: 1476 LCNNPQTKEAKLTAAQRIVPEWKDYDAELKTLMSRI 1511
>sp|Q09140|UGGG_SCHPO UDP-glucose:glycoprotein glucosyltransferase precursor
(UDP--Glc:glycoprotein glucosyltransferase) (UGT)
Length = 1448
Score = 226 bits (577), Expect = 3e-59
Identities = 105/163 (64%), Positives = 118/163 (72%)
Frame = +2
Query: 2 DLDLEGAPYGYTPFCSSKPEMDGFRFWKSGYWSQHLAGRPYHISALYVVDLNRFRMMAAG 181
D+DL GAPYGYTP C S+ EM+GFRFWK GYW + L G YHISALYVVDL+RFR M AG
Sbjct: 1273 DMDLHGAPYGYTPMCDSREEMEGFRFWKKGYWKKFLRGLKYHISALYVVDLDRFRKMGAG 1332
Query: 182 DRLRGQYHGLSQDPNSLANLDQDLPNNMIHQVPIKSLPQEWLWCETWCSAEEKVKAKTID 361
D LR QY LS DPNSL+NLDQDLPN++ H +PI SLPQ+WLWCETWCS E AKTID
Sbjct: 1333 DLLRRQYQLLSADPNSLSNLDQDLPNHLQHLIPIYSLPQDWLWCETWCSDESLKTAKTID 1392
Query: 362 LCNNPMTKEPKLSAAMRILPEWNGYDREIKGLWNEVYSLKPKE 490
LC NP+TKE KL A R + EW YD EI + S KE
Sbjct: 1393 LCQNPLTKEKKLDRARRQVSEWTSYDNEIASVLQTASSQSDKE 1435
>sp|P22023|KRE5_YEAST Killer toxin-resistance protein 5 precursor
Length = 1365
Score = 62.8 bits (151), Expect = 7e-10
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +2
Query: 62 MDGFRFWKSGYWSQHLAGRP---YHISALYVVDLNRFRMMAAGDRLRGQYHGLSQDPNSL 232
M G +WK GYW + L Y ++V+L RFR + AGD+ R Y +S D SL
Sbjct: 1230 MSGDGYWKEGYWEKMLRENNLEFYSTEPAFLVNLERFRELDAGDKYRIHYQRISTDAMSL 1289
Query: 233 ANLDQDLPNNMIHQVPIKSL 292
N+ QDL NN+ +VPI+ L
Sbjct: 1290 VNIGQDLVNNLQLEVPIRFL 1309
>sp|O21078|NU2M_MYXGL NADH-ubiquinone oxidoreductase chain 2 (NADH dehydrogenase subunit
2)
Length = 348
Score = 31.2 bits (69), Expect = 2.3
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +3
Query: 18 VRRMVIHHSVVQNQKWMVSDSGRVVIGLNI*LADLTIFLLSM--SLTLTDSE*WLPEIVY 191
+ + V +++ W SG+ I +T+ +L++ L L WLPE++
Sbjct: 58 ISQAVASSTIILASSWNYFSSGQWTISFMSDNLAITLIILALLLKLGLAPLHFWLPEVLQ 117
Query: 192 GVNIMV*VKILIVWRIWIKICQII*FTRSQSNRYL 296
GVN+ + + I+ W+ + +I + + +N Y+
Sbjct: 118 GVNLHMGL-IISTWQKLAPLTLLIQVSSNLNNMYI 151
>sp|P03893|NU2M_MOUSE NADH-ubiquinone oxidoreductase chain 2 (NADH dehydrogenase subunit
2)
Length = 345
Score = 31.2 bits (69), Expect = 2.3
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 27 MVIHHSVVQNQK----WMVSDSGRVVIGLNI*LADLTIFLLSMSLTLTDSE*WLPEIVYG 194
M+I ++V N K WM +I ++T+ LSM L L WLPE+ G
Sbjct: 68 MIILLAIVLNYKQLGTWMFQQQTNGLI------LNMTLMALSMKLGLAPFHFWLPEVTQG 121
Query: 195 VNIMV*VKILIVWR 236
+ + + + IL+ W+
Sbjct: 122 IPLHMGL-ILLTWQ 134
>sp|O83802|TRUA_TREPA tRNA pseudouridine synthase A (tRNA-uridine isomerase I) (tRNA
pseudouridylate synthase I)
Length = 280
Score = 30.8 bits (68), Expect = 3.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 507 WKLSSSLTKTFRHCRKPNCKIQTF 578
WK+ SLT T HC K C ++ F
Sbjct: 202 WKMVRSLTGTLLHCEKKRCSVREF 225
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,288,447
Number of Sequences: 369166
Number of extensions: 1695593
Number of successful extensions: 3938
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3936
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5072399280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)