Planarian EST Database


Dr_sW_009_P03

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_009_P03
         (734 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9DBP5|KCY_MOUSE  UMP-CMP kinase (Cytidylate kinase) (Deo...   200   3e-51
sp|P30085|KCY_HUMAN  UMP-CMP kinase (Cytidylate kinase) (Deo...   200   3e-51
sp|Q29561|KCY_PIG  UMP-CMP kinase (Cytidylate kinase) (Deoxy...   199   8e-51
sp|O04905|UMPK_ARATH  Uridylate kinase (UK) (Uridine monopho...   167   3e-41
sp|P15700|UMPK_YEAST  Uridylate kinase (UK) (Uridine monopho...   163   4e-40
sp|P20425|KCY_DICDI  Cytidylate kinase (Deoxycytidylate kina...   162   7e-40
sp|O24464|KAD_PRUAR  Adenylate kinase (ATP-AMP transphosphor...   162   9e-40
sp|O59771|UMPK_SCHPO  Probable uridylate kinase (UK) (Uridin...   152   1e-36
sp|P39069|KAD1_RAT  Adenylate kinase isoenzyme 1 (ATP-AMP tr...   135   1e-31
sp|P12115|KAD_CYPCA  Adenylate kinase (ATP-AMP transphosphor...   134   3e-31
>sp|Q9DBP5|KCY_MOUSE UMP-CMP kinase (Cytidylate kinase) (Deoxycytidylate kinase)
           (Cytidine monophosphate kinase) (Uridine
           monophosphate/cytidine monophosphate kinase) (UMP/CMP
           kinase) (UMP/CMPK) (Uridine monophosphate kinase)
          Length = 196

 Score =  200 bits (509), Expect = 3e-51
 Identities = 94/181 (51%), Positives = 133/181 (73%), Gaps = 7/181 (3%)
 Frame = +3

Query: 75  VTFVLGGPGSGKGTQCINIAKTFGYLHISAGDLLREEKDNANSQYGDLIKKHMQEGSIVP 254
           V FVLGGPG+GKGTQC  I + +GY H+SAG+LLR+E+ N +SQYG+LI+K+++EG IVP
Sbjct: 5   VVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVP 64

Query: 255 VEITCSLIEKAMKA-----SGKSKFLIDGFPRNQNNLDGWNKVMSDKVHIETVLYIECSE 419
           VEIT SL+++ M       + K+KFLIDGFPRNQ+NL GWNK M  K  +  VL+ +C+ 
Sbjct: 65  VEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNN 124

Query: 420 DACVKRCLGRG--TGRVDDNEETLKKRLVQFKSECKPIIDHFDKENKVLKVNGDLTIEEV 593
           + C++RCL RG  +GR DDN E+L+KR+  +    KPIID +++  KV K++   +++EV
Sbjct: 125 EICIERCLERGKSSGRSDDNRESLEKRIQTYLESTKPIIDLYEEMGKVKKIDASKSVDEV 184

Query: 594 F 596
           F
Sbjct: 185 F 185
>sp|P30085|KCY_HUMAN UMP-CMP kinase (Cytidylate kinase) (Deoxycytidylate kinase)
           (Cytidine monophosphate kinase) (Uridine
           monophosphate/cytidine monophosphate kinase) (UMP/CMP
           kinase) (UMP/CMPK) (Uridine monophosphate kinase)
          Length = 196

 Score =  200 bits (509), Expect = 3e-51
 Identities = 94/181 (51%), Positives = 133/181 (73%), Gaps = 7/181 (3%)
 Frame = +3

Query: 75  VTFVLGGPGSGKGTQCINIAKTFGYLHISAGDLLREEKDNANSQYGDLIKKHMQEGSIVP 254
           V FVLGGPG+GKGTQC  I + +GY H+SAG+LLR+E+ N +SQYG+LI+K+++EG IVP
Sbjct: 5   VVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVP 64

Query: 255 VEITCSLIEKAMKA-----SGKSKFLIDGFPRNQNNLDGWNKVMSDKVHIETVLYIECSE 419
           VEIT SL+++ M       + K+KFLIDGFPRNQ+NL GWNK M  K  +  VL+ +C+ 
Sbjct: 65  VEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNN 124

Query: 420 DACVKRCLGRG--TGRVDDNEETLKKRLVQFKSECKPIIDHFDKENKVLKVNGDLTIEEV 593
           + C++RCL RG  +GR DDN E+L+KR+  +    KPIID +++  KV K++   +++EV
Sbjct: 125 EICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEV 184

Query: 594 F 596
           F
Sbjct: 185 F 185
>sp|Q29561|KCY_PIG UMP-CMP kinase (Cytidylate kinase) (Deoxycytidylate kinase)
           (Cytidine monophosphate kinase) (Uridine
           monophosphate/cytidine monophosphate kinase) (UMP/CMP
           kinase) (UMP/CMPK) (Uridine monophosphate kinase)
          Length = 196

 Score =  199 bits (505), Expect = 8e-51
 Identities = 93/181 (51%), Positives = 132/181 (72%), Gaps = 7/181 (3%)
 Frame = +3

Query: 75  VTFVLGGPGSGKGTQCINIAKTFGYLHISAGDLLREEKDNANSQYGDLIKKHMQEGSIVP 254
           V FVLGGPG+GKGTQC  I + +GY H+SAG+LLR+E+ N +SQYG+LI+K++++G IVP
Sbjct: 5   VVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKDGKIVP 64

Query: 255 VEITCSLIEKAMKA-----SGKSKFLIDGFPRNQNNLDGWNKVMSDKVHIETVLYIECSE 419
           VEIT SL+ + M       + K+KFLIDGFPRNQ+NL GWNK M  K  +  VL+ +C+ 
Sbjct: 65  VEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNN 124

Query: 420 DACVKRCLGRG--TGRVDDNEETLKKRLVQFKSECKPIIDHFDKENKVLKVNGDLTIEEV 593
           + C++RCL RG  +GR DDN E+L+KR+  +    KPIID +++  KV K++   +++EV
Sbjct: 125 EICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEV 184

Query: 594 F 596
           F
Sbjct: 185 F 185
>sp|O04905|UMPK_ARATH Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
           (UMP/CMP kinase)
          Length = 202

 Score =  167 bits (423), Expect = 3e-41
 Identities = 90/195 (46%), Positives = 126/195 (64%)
 Frame = +3

Query: 36  SSGSGDVETQKFSVTFVLGGPGSGKGTQCINIAKTFGYLHISAGDLLREEKDNANSQYGD 215
           ++GSG    +K +V FVLGGPGSGKGTQC  I + +GY H+SAGDLLR E   + S+ G 
Sbjct: 7   ANGSG----KKPTVIFVLGGPGSGKGTQCAYIVEHYGYTHLSAGDLLRAEI-KSGSENGT 61

Query: 216 LIKKHMQEGSIVPVEITCSLIEKAMKASGKSKFLIDGFPRNQNNLDGWNKVMSDKVHIET 395
           +I+  ++EG IVP E+T  L++KA++ +G  KFLIDGFPRN+ N   + KV   ++  + 
Sbjct: 62  MIQNMIKEGKIVPSEVTIKLLQKAIQENGNDKFLIDGFPRNEENRAAFEKVT--EIEPKF 119

Query: 396 VLYIECSEDACVKRCLGRGTGRVDDNEETLKKRLVQFKSECKPIIDHFDKENKVLKVNGD 575
           VL+ +C E+   KR LGR  GR DDN ET++KR   F     P+I +++ + KV K+N  
Sbjct: 120 VLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVIHYYEAKGKVRKINAA 179

Query: 576 LTIEEVFAIIKDKFS 620
             IE VF  +K  FS
Sbjct: 180 KPIEAVFEEVKAIFS 194
>sp|P15700|UMPK_YEAST Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
          Length = 204

 Score =  163 bits (413), Expect = 4e-40
 Identities = 84/185 (45%), Positives = 124/185 (67%), Gaps = 5/185 (2%)
 Frame = +3

Query: 72  SVTFVLGGPGSGKGTQCINIAKTFGYLHISAGDLLREEKDNANSQYGDLIKKHMQEGSIV 251
           SV FVLGGPG+GKGTQC  + K + ++H+SAGDLLR E+  A SQYG+LIK  ++EG IV
Sbjct: 17  SVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIV 76

Query: 252 PVEITCSLIEKAMK---ASGKSKFLIDGFPRNQNNLDGWNKVMSDKVHIETVLYIECSED 422
           P EIT +L+  A+     + K KFLIDGFPR  +    + +   D V  + +L+ +C ED
Sbjct: 77  PQEITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFER---DIVESKFILFFDCPED 133

Query: 423 ACVKRCLGRG--TGRVDDNEETLKKRLVQFKSECKPIIDHFDKENKVLKVNGDLTIEEVF 596
             ++R L RG  +GR DDN E++KKR   FK    P+I++F+ ++KV++V  D ++E+V+
Sbjct: 134 IMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVVRVRCDRSVEDVY 193

Query: 597 AIIKD 611
             ++D
Sbjct: 194 KDVQD 198
>sp|P20425|KCY_DICDI Cytidylate kinase (Deoxycytidylate kinase) (UMP-CMP kinase)
          Length = 194

 Score =  162 bits (411), Expect = 7e-40
 Identities = 82/192 (42%), Positives = 126/192 (65%), Gaps = 2/192 (1%)
 Frame = +3

Query: 54  VETQKFSVTFVLGGPGSGKGTQCINIAKTFGYLHISAGDLLREEKDNANSQYGDLIKKHM 233
           +E  K +V FVLGGPGSGKGTQC NI + FG++H+SAGDLLR+E+ +  S+ G++I   +
Sbjct: 1   MEKSKPNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSG-SKDGEMIATMI 59

Query: 234 QEGSIVPVEITCSLIEKAMKASGKSKFLIDGFPRNQNNLDGWNKVMSDKVHIETVLYIEC 413
           + G IVP  +T  L++ A+ A+    FL+DGFPRN+ N + W + M D V  + VL+ +C
Sbjct: 60  KNGEIVPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDC 119

Query: 414 SEDACVKRCLGRG--TGRVDDNEETLKKRLVQFKSECKPIIDHFDKENKVLKVNGDLTIE 587
            E+   +R L RG  +GR DDN E++KKR   F  + K +IDH++K +KV  +  +  + 
Sbjct: 120 PEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVN 179

Query: 588 EVFAIIKDKFST 623
           EV+  +++ F +
Sbjct: 180 EVYNDVENLFKS 191
>sp|O24464|KAD_PRUAR Adenylate kinase (ATP-AMP transphosphorylase)
          Length = 231

 Score =  162 bits (410), Expect = 9e-40
 Identities = 83/182 (45%), Positives = 118/182 (64%)
 Frame = +3

Query: 75  VTFVLGGPGSGKGTQCINIAKTFGYLHISAGDLLREEKDNANSQYGDLIKKHMQEGSIVP 254
           VTFVLGGPGSGKGTQC  I + FG+ H+SAGDLLR E   + S YG +I   ++EG IVP
Sbjct: 49  VTFVLGGPGSGKGTQCAKIVEAFGFTHVSAGDLLRRE-IASGSAYGSVILSTIREGKIVP 107

Query: 255 VEITCSLIEKAMKASGKSKFLIDGFPRNQNNLDGWNKVMSDKVHIETVLYIECSEDACVK 434
            ++T  LI+K M++S   KFLIDGFPR++ N   + + +      + VL+ +C E   VK
Sbjct: 108 SQVTVELIQKEMESSDNYKFLIDGFPRSEENRKAFEQTIG--AEPDVVLFFDCPEQEMVK 165

Query: 435 RCLGRGTGRVDDNEETLKKRLVQFKSECKPIIDHFDKENKVLKVNGDLTIEEVFAIIKDK 614
           R L R  GRVDDN +T+KKRL  F     P+I+++ +  K+ K+N   T++E+F  ++  
Sbjct: 166 RVLNRNQGRVDDNIDTIKKRLEIFDELNWPVINYYSQRGKLHKINAVGTVDEIFEKVRPI 225

Query: 615 FS 620
           F+
Sbjct: 226 FA 227
>sp|O59771|UMPK_SCHPO Probable uridylate kinase (UK) (Uridine monophosphate kinase) (UMP
           kinase)
          Length = 191

 Score =  152 bits (383), Expect = 1e-36
 Identities = 77/182 (42%), Positives = 120/182 (65%), Gaps = 6/182 (3%)
 Frame = +3

Query: 69  FSVTFVLGGPGSGKGTQCINIAKTFG-YLHISAGDLLREEKDNANSQYGDLIKKHMQEGS 245
           ++V FVLGGPG+GKGTQC  +A+ F  ++HISAGD LREE++   S+YG+LIK+++++G 
Sbjct: 2   YNVIFVLGGPGAGKGTQCDRLAEKFDKFVHISAGDCLREEQNRPGSKYGNLIKEYIKDGK 61

Query: 246 IVPVEITCSLIEKAMKA---SGKSKFLIDGFPRNQNNLDGWNKVMSDKVHIETVLYIECS 416
           IVP+EIT SL+E  MK     G  KFLIDGFPR  +  +G+ K +      +  LY  C 
Sbjct: 62  IVPMEITISLLETKMKECHDKGIDKFLIDGFpreMDQCEGFEKSVCP---AKFALYFRCG 118

Query: 417 EDACVKRCLGRG--TGRVDDNEETLKKRLVQFKSECKPIIDHFDKENKVLKVNGDLTIEE 590
           ++  +KR + RG  +GR DDN E++KKR V +     P++++   +N+++ ++ +   + 
Sbjct: 119 QETMLKRLIHRGKTSGRSDDNIESIKKRFVTYTKASMPVVEYLKSQNRLITIDAEQDPDA 178

Query: 591 VF 596
           VF
Sbjct: 179 VF 180
>sp|P39069|KAD1_RAT Adenylate kinase isoenzyme 1 (ATP-AMP transphosphorylase) (AK1)
           (Myokinase)
          Length = 194

 Score =  135 bits (340), Expect = 1e-31
 Identities = 71/183 (38%), Positives = 111/183 (60%), Gaps = 4/183 (2%)
 Frame = +3

Query: 63  QKFSVTFVLGGPGSGKGTQCINIAKTFGYLHISAGDLLREEKDNANSQYGDLIKKHMQEG 242
           +K  + FV+GGPGSGKGTQC  I + +GY H+S GDLLR E  + +S+ G ++   M++G
Sbjct: 6   KKAKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSSR-GKMLSSIMEKG 64

Query: 243 SIVPVEITCSLIEKAM--KASGKSKFLIDGFPRNQNNLDGWNKVMSDKVHIETVLYIECS 416
            +VP+E    ++  AM  K    + FLIDG+PR     + + + ++       +LY++  
Sbjct: 65  ELVPLETVLDMLRDAMFAKVDSSNGFLIDGYpreVKQGEEFERKIAQPT---LLLYVDAG 121

Query: 417 EDACVKRCLGRG--TGRVDDNEETLKKRLVQFKSECKPIIDHFDKENKVLKVNGDLTIEE 590
            +   +R L RG  +GRVDDNEET+KKRL  +    +P+I  +DK   V KVN + +++ 
Sbjct: 122 PETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVISFYDKRGIVRKVNAEGSVDT 181

Query: 591 VFA 599
           VF+
Sbjct: 182 VFS 184
>sp|P12115|KAD_CYPCA Adenylate kinase (ATP-AMP transphosphorylase)
          Length = 193

 Score =  134 bits (337), Expect = 3e-31
 Identities = 73/181 (40%), Positives = 112/181 (61%), Gaps = 4/181 (2%)
 Frame = +3

Query: 75  VTFVLGGPGSGKGTQCINIAKTFGYLHISAGDLLREEKDNANSQYGDLIKKHMQEGSIVP 254
           + FV+GGPGSGKGTQC  I + +GY H+S+GDLLR E   + S+ G  ++  MQ+G +VP
Sbjct: 9   IVFVVGGPGSGKGTQCEKIVEKYGYTHLSSGDLLRAEV-ASGSERGKQLQAIMQKGELVP 67

Query: 255 VEITCSLIEKAM--KASGKSKFLIDGFPRNQNNLDGWNKVMSDKVHIETVLYIECSEDAC 428
           ++    +I+ AM  KA     +LIDG+PR     + + K +        +LYI+   +  
Sbjct: 68  LDTVLDMIKDAMIAKADVSKGYLIDGYpreVKQGEEFEKKIGAPA---LLLYIDAKAETM 124

Query: 429 VKRCLGRG--TGRVDDNEETLKKRLVQFKSECKPIIDHFDKENKVLKVNGDLTIEEVFAI 602
           V+R + RG  +GR DDNEET+KKRL  +    +P+I +++    V K+N +L ++EVFAI
Sbjct: 125 VQRLMKRGQTSGRSDDNEETIKKRLDLYYKATEPVIAYYETRGIVRKINSELPVDEVFAI 184

Query: 603 I 605
           +
Sbjct: 185 V 185
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,379,696
Number of Sequences: 369166
Number of extensions: 1687783
Number of successful extensions: 5425
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5061
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6582889600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)