Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_O22
(412 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 121 6e-28
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 121 6e-28
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 121 6e-28
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 118 4e-27
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 117 9e-27
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 116 2e-26
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 115 3e-26
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 115 4e-26
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 114 6e-26
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (He... 114 1e-25
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 121 bits (303), Expect = 6e-28
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +1
Query: 1 IAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYH 180
+++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++
Sbjct: 536 VSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQ 595
Query: 181 YKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 333
KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 596 QKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 121 bits (303), Expect = 6e-28
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +1
Query: 1 IAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYH 180
+++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++
Sbjct: 536 VSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQ 595
Query: 181 YKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 333
KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 596 QKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 121 bits (303), Expect = 6e-28
Identities = 58/111 (52%), Positives = 74/111 (66%)
Frame = +1
Query: 1 IAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYH 180
+++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++
Sbjct: 536 VSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQ 595
Query: 181 YKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 333
KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 596 QKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 118 bits (296), Expect = 4e-27
Identities = 59/114 (51%), Positives = 74/114 (64%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 IAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYH 180
++AKN LESYA+ MK+TVEDEKLK KIS+ D++ I+DKC E IGWLDKNQ A ++EF++
Sbjct: 536 VSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQ 595
Query: 181 YKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 333
KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 596 QKELEKVCNPIITKLYQSAGGMPGGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 117 bits (293), Expect = 9e-27
Identities = 58/116 (50%), Positives = 75/116 (64%), Gaps = 5/116 (4%)
Frame = +1
Query: 1 IAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYH 180
+++KNSLESYA+ MK+TVEDEKL+ KIS+ D+ I++KC E IGWLDKNQ A K+E+++H
Sbjct: 536 VSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHH 595
Query: 181 YKELEKVCNPIMTKMYQ-----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 333
KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 596 QKELEKVCNPIITKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 116 bits (291), Expect = 2e-26
Identities = 60/111 (54%), Positives = 71/111 (63%)
Frame = +1
Query: 1 IAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYH 180
IAAKN+LESYA+ MK T+EDEKLKDKISE D+K I +KC E + WLD NQ A KDEF++
Sbjct: 535 IAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHR 594
Query: 181 YKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 333
KELE VCNPI+TK+YQ GPT+EEVD
Sbjct: 595 QKELESVCNPIITKLYQSAGGMPGGMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 115 bits (289), Expect = 3e-26
Identities = 58/114 (50%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Frame = +1
Query: 1 IAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYH 180
++AKN LESYA+ MK+TVEDEKLK KIS+ D+ I+DKC E I WLDKNQ A KDE+++
Sbjct: 536 VSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQ 595
Query: 181 YKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 333
K+LEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 596 QKDLEKVCNPIITKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 115 bits (287), Expect = 4e-26
Identities = 57/111 (51%), Positives = 72/111 (64%)
Frame = +1
Query: 1 IAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYH 180
+AAKN+LESY Y +K TVEDEKL+ KISE D+ I+DKCQE I WLD+NQ A KDE+++
Sbjct: 539 VAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHK 598
Query: 181 YKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 333
KELE+VCNPI++K+YQ GPT+EEVD
Sbjct: 599 QKELERVCNPIISKLYQ----------GGPGGGSGGGGSGASGGPTIEEVD 639
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 114 bits (286), Expect = 6e-26
Identities = 57/112 (50%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Frame = +1
Query: 1 IAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYH 180
+ AKNSLESY Y MK TVEDEK+K KISE D+K I+ KC E + W+DKNQ A KD++++
Sbjct: 543 VQAKNSLESYCYNMKQTVEDEKVKGKISEEDKKTIIKKCNETVEWVDKNQTAEKDQYEHK 602
Query: 181 YKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQ-GPTVEEVD 333
KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 603 QKELEKVCNPIITKLYQAGGGMPGGMPGGMPGGMPGSGSKASSGGPTIEEVD 654
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
(Testis-specific heat shock protein-related) (HST)
Length = 633
Score = 114 bits (284), Expect = 1e-25
Identities = 56/111 (50%), Positives = 72/111 (64%)
Frame = +1
Query: 1 IAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYH 180
+AAKN++ESY Y +K TVEDEKL+ KISE D+ I+DKCQE I WLD+NQ A KDE+++
Sbjct: 539 VAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHK 598
Query: 181 YKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 333
KELE+VCNPI++K+YQ GPT+EEVD
Sbjct: 599 QKELERVCNPIISKLYQ----------------GGPGGGGSSGGPTIEEVD 633
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,374,517
Number of Sequences: 369166
Number of extensions: 389292
Number of successful extensions: 1613
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 68,354,980
effective HSP length: 99
effective length of database: 50,066,215
effective search space used: 1852449955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)