Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_O11
(382 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07584|ASTA_ASTFL Astacin precursor (Crayfish small-mole... 33 0.15
sp|P55112|NAS4_CAEEL Zinc metalloproteinase nas-4 precursor... 33 0.26
sp|Q22396|NAS20_CAEEL Zinc metalloproteinase nas-20 precurs... 31 0.77
sp|P98070|BMP1_XENLA Bone morphogenetic protein 1 precursor... 31 1.0
sp|O57460|TLL1_BRARE Dorsal-ventral patterning tolloid-like... 31 1.0
sp|Q9P7C3|YKU1_SCHPO Putative mannosyl-oligosaccharide 1,2-... 30 2.2
sp|P13497|BMP1_HUMAN Bone morphogenetic protein 1 precursor... 29 2.9
sp|P98063|BMP1_MOUSE Bone morphogenetic protein 1 precursor... 29 2.9
sp|O80505|ALG8_ARATH Probable dolichyl pyrophosphate Glc1Ma... 28 6.5
sp|P87127|ATP11_SCHPO Protein atp11, mitochondrial precursor 28 8.5
>sp|P07584|ASTA_ASTFL Astacin precursor (Crayfish small-molecule proteinase)
Length = 251
Score = 33.5 bits (75), Expect = 0.15
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 190 WPNNVVLYSFAGNFPRDKIGAVRESLGELQNDLRGCV*F-QESTNGHYIEVNSKQEGCYS 366
W V+ Y+FAG D+ A+ + EL+ + C+ F +T Y+E+ + GC+S
Sbjct: 59 WSGGVIPYTFAGVSGADQ-SAILSGMQELEE--KTCIRFVPRTTESDYVEIFTSGSGCWS 115
Query: 367 LLG 375
+G
Sbjct: 116 YVG 118
>sp|P55112|NAS4_CAEEL Zinc metalloproteinase nas-4 precursor (Nematode astacin 4)
Length = 315
Score = 32.7 bits (73), Expect = 0.26
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 154 NGFKNHYANSKKWPNNVVLYSFAGNFPRDKIGAVRESLGELQNDLRGCV*F---QESTNG 324
N K Y ++WPNN + Y+ + + + ++ E + CV F S +
Sbjct: 95 NAIKQIY---RRWPNNEIPYTLSSQYGSYARSVIANAMNEYHT--KTCVKFVARDPSKHH 149
Query: 325 HYIEVNSKQEGCYSLLGFT 381
Y+ ++ EGCYSL+G T
Sbjct: 150 DYLWIH-PDEGCYSLVGKT 167
>sp|Q22396|NAS20_CAEEL Zinc metalloproteinase nas-20 precursor (Nematode astacin 20)
Length = 379
Score = 31.2 bits (69), Expect = 0.77
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 187 KWPNNVVLYSFAGNFPRDKIGAVRESLGELQNDLRGCV*FQESTNGHYIEVNSKQEGCYS 366
KW NN + F N P + R+++ L+N C+ F+ + N K GCYS
Sbjct: 37 KWENNKMSLFFY-NLPLEMQAMFRDAINYLENHT--CLKFEYNENAETAVRIRKGNGCYS 93
Query: 367 LLG 375
L G
Sbjct: 94 LYG 96
>sp|P98070|BMP1_XENLA Bone morphogenetic protein 1 precursor (BMP-1)
Length = 707
Score = 30.8 bits (68), Expect = 1.0
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 190 WPNNVVLYSFAGNFPRDKIGAVRESLGELQNDLRGCV*FQESTN-GHYIEVNSKQEGCYS 366
WP+ V+ Y +GNF + R+++ + CV F E T+ YI + GC S
Sbjct: 93 WPDGVIPYVISGNFSGSQRAIFRQAMRHWEK--HTCVTFLERTDEDSYIVFTYRPCGCCS 150
Query: 367 LLG 375
+G
Sbjct: 151 YVG 153
>sp|O57460|TLL1_BRARE Dorsal-ventral patterning tolloid-like protein 1 precursor (Mini
fin protein)
Length = 1022
Score = 30.8 bits (68), Expect = 1.0
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 184 KKWPNNVVLYSFAGNFPRDKIGAVRESLGELQNDLRGCV*FQESTNGH-YIEVNSKQEGC 360
K WP V+ Y GNF + +++++ + + CV F E T+ YI + GC
Sbjct: 164 KIWPGGVIPYVIGGNFTGSQRAMLKQAMRHWEK--QTCVTFIEKTDEESYIVFTYRPCGC 221
Query: 361 YSLLG 375
S +G
Sbjct: 222 CSYVG 226
>sp|Q9P7C3|YKU1_SCHPO Putative mannosyl-oligosaccharide 1,2-alpha-mannosidase
(Man(9)-alpha-mannosidase)
Length = 521
Score = 29.6 bits (65), Expect = 2.2
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 58 GW-RPQYRKLLERSLSTVKLGDMWL--DSTDIAIINGFKNHYANSKKWPNNVVLYS 216
GW + +Y +++R + ++ G W+ DS D +I G +++W NN + ++
Sbjct: 65 GWGKDEYYPIIKRGRNYLRKGMGWMIIDSLDTMMIMGLDEQVLRAREWVNNSLTWN 120
>sp|P13497|BMP1_HUMAN Bone morphogenetic protein 1 precursor (BMP-1) (Procollagen
C-proteinase) (PCP) (Mammalian tolloid protein) (mTld)
Length = 986
Score = 29.3 bits (64), Expect = 2.9
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 190 WPNNVVLYSFAGNFPRDKIGAVRESLGELQNDLRGCV*FQESTN-GHYIEVNSKQEGCYS 366
WP+ V+ + GNF + R+++ + CV F E T+ YI + GC S
Sbjct: 130 WPDGVIPFVIGGNFTGSQRAVFRQAMRHWEK--HTCVTFLERTDEDSYIVFTYRPCGCCS 187
Query: 367 LLG 375
+G
Sbjct: 188 YVG 190
>sp|P98063|BMP1_MOUSE Bone morphogenetic protein 1 precursor (BMP-1) (Procollagen
C-proteinase) (PCP) (Mammalian tolloid protein) (mTld)
Length = 991
Score = 29.3 bits (64), Expect = 2.9
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 190 WPNNVVLYSFAGNFPRDKIGAVRESLGELQNDLRGCV*FQESTN-GHYIEVNSKQEGCYS 366
WP+ V+ + GNF + R+++ + CV F E T+ YI + GC S
Sbjct: 135 WPDGVIPFVIGGNFTGSQRAVFRQAMRHWEK--HTCVTFLERTDEDSYIVFTYRPCGCCS 192
Query: 367 LLG 375
+G
Sbjct: 193 YVG 195
>sp|O80505|ALG8_ARATH Probable dolichyl pyrophosphate Glc1Man9GlcNAc2
alpha-1,3-glucosyltransferase
(Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl
glucosyltransferase)
Length = 383
Score = 28.1 bits (61), Expect = 6.5
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 13/109 (11%)
Frame = -2
Query: 348 F*IDFNVMAISRFLEL-----DATSQIVLKFTK*FSHCSNFIS---REVSSERIQNYIVW 193
F + N +AI+ L L D TSQ L + F++ F+S R V +
Sbjct: 35 FEVHRNWLAITNSLPLTKWYFDETSQWTLDYPPFFAYFERFLSIFARLVDPRIVDLQSGL 94
Query: 192 PFLAVGIMIFESV-----DNCNISGIQPHVTQLDSAERSLQQLPILWSP 61
+ A ++ F+ + D C + G+ +L+ +R+L ++WSP
Sbjct: 95 DYNAESVIYFQRISVIVSDLCLLYGVYRLTRKLEPLKRNLICALVIWSP 143
>sp|P87127|ATP11_SCHPO Protein atp11, mitochondrial precursor
Length = 286
Score = 27.7 bits (60), Expect = 8.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 295 NLSNRFEVHQVILSLLQFYLEGSFQRTNT 209
N N+ E H ++ SLL++ L+GS+ +T
Sbjct: 178 NFPNKNEAHLLVTSLLEYKLKGSYAAPHT 206
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,718,746
Number of Sequences: 369166
Number of extensions: 801839
Number of successful extensions: 1925
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1924
length of database: 68,354,980
effective HSP length: 93
effective length of database: 51,174,625
effective search space used: 1688762625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)