Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_M21
(484 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8TFN0|NDK_EMENI Nucleoside diphosphate kinase (NDK) (ND... 200 2e-51
sp|P27950|NDK_GINCI Nucleoside diphosphate kinase (NDK) (ND... 197 1e-50
sp|P19804|NDKB_RAT Nucleoside diphosphate kinase B (NDK B) ... 192 3e-49
sp|Q50KA9|NDKA_CANFA Nucleoside diphosphate kinase A (NDK A... 192 4e-49
sp|P15531|NDKA_HUMAN Nucleoside diphosphate kinase A (NDK A... 191 1e-48
sp|P15532|NDKA_MOUSE Nucleoside diphosphate kinase A (NDK A... 190 2e-48
sp|Q01768|NDKB_MOUSE Nucleoside diphosphate kinase B (NDK B... 189 3e-48
sp|Q05982|NDKA_RAT Nucleoside diphosphate kinase A (NDK A) ... 189 3e-48
sp|P22392|NDKB_HUMAN Nucleoside diphosphate kinase B (NDK B... 189 4e-48
sp|P52174|NDKA_BOVIN Nucleoside diphosphate kinase NBR-A (N... 189 4e-48
>sp|Q8TFN0|NDK_EMENI Nucleoside diphosphate kinase (NDK) (NDP kinase) (AnNDK)
Length = 153
Score = 200 bits (508), Expect = 2e-51
Identities = 93/142 (65%), Positives = 113/142 (79%)
Frame = +1
Query: 1 VKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLS 180
+KPDGVQRGLVG II+RFE RGFKL A+K+ P + LLE HY +LK+KPFFP L+ YMLS
Sbjct: 10 IKPDGVQRGLVGPIISRFENRGFKLAAMKLTSPSRSLLEQHYSDLKEKPFFPGLVTYMLS 69
Query: 181 GPVVCMVWQGYEMVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREI 360
GP+V MVW+G ++VK GR +LGAT P+ S PGTIRGDFA GRN+ HGSDSVESAK+EI
Sbjct: 70 GPIVAMVWEGKDVVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVESAKKEI 129
Query: 361 GLWFTAKDLGEYKLCADIWVQE 426
GLWFT +++ YKL A W+ E
Sbjct: 130 GLWFTPEEIQNYKLNAFGWIYE 151
>sp|P27950|NDK_GINCI Nucleoside diphosphate kinase (NDK) (NDP kinase)
Length = 151
Score = 197 bits (500), Expect = 1e-50
Identities = 93/142 (65%), Positives = 110/142 (77%)
Frame = +1
Query: 1 VKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLS 180
VKPDGVQR +VG +I RFEQ+GFKL+A+K +Q K LLE HY EL DKPF+PKLI+YM S
Sbjct: 10 VKPDGVQRCIVGEVIKRFEQKGFKLVAMKFLQAPKDLLEKHYCELSDKPFYPKLIKYMSS 69
Query: 181 GPVVCMVWQGYEMVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREI 360
GPVV MVW+G +VK GR +LG T P DS PGTIRGDF GRNI+HGSDSVESAK+EI
Sbjct: 70 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAKKEI 129
Query: 361 GLWFTAKDLGEYKLCADIWVQE 426
LWF ++L EY+ CA W+ E
Sbjct: 130 SLWFKREELVEYQNCAQDWIYE 151
>sp|P19804|NDKB_RAT Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (P18)
Length = 152
Score = 192 bits (488), Expect = 3e-49
Identities = 89/142 (62%), Positives = 112/142 (78%)
Frame = +1
Query: 1 VKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLS 180
+KPDGVQRGLVG II RFEQ+GF+L+A+K ++ ++ L+ HY +LKD+PFFP L++YM S
Sbjct: 11 IKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNS 70
Query: 181 GPVVCMVWQGYEMVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREI 360
GPVV MVW+G +VK GR +LG T P DS PGTIRGDF GRNI+HGSDSVESA++EI
Sbjct: 71 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEI 130
Query: 361 GLWFTAKDLGEYKLCADIWVQE 426
GLWF ++L +YK CA WV E
Sbjct: 131 GLWFKPEELIDYKSCAHDWVYE 152
>sp|Q50KA9|NDKA_CANFA Nucleoside diphosphate kinase A (NDK A) (NDP kinase A) (nm23-C1)
Length = 152
Score = 192 bits (487), Expect = 4e-49
Identities = 89/142 (62%), Positives = 111/142 (78%)
Frame = +1
Query: 1 VKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLS 180
+KPDGVQR LVG II RFEQ+GF+LIA+K++Q + LL+ HY +LKD+PFF L++YM S
Sbjct: 11 IKPDGVQRSLVGEIIKRFEQKGFRLIAMKLIQASEDLLKEHYIDLKDRPFFAGLVKYMQS 70
Query: 181 GPVVCMVWQGYEMVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREI 360
GPVV MVW+G +VK GR +LG T P DS PGTIRGDF GRNI+HGSDSVESA++EI
Sbjct: 71 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEI 130
Query: 361 GLWFTAKDLGEYKLCADIWVQE 426
GLWF ++L +YK CA W+ E
Sbjct: 131 GLWFQPEELVDYKSCAQNWIYE 152
>sp|P15531|NDKA_HUMAN Nucleoside diphosphate kinase A (NDK A) (NDP kinase A) (Tumor
metastatic process-associated protein) (Metastasis
inhibition factor nm23) (nm23-H1) (Granzyme A-activated
DNase) (GAAD)
Length = 152
Score = 191 bits (484), Expect = 1e-48
Identities = 88/142 (61%), Positives = 109/142 (76%)
Frame = +1
Query: 1 VKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLS 180
+KPDGVQRGLVG II RFEQ+GF+L+ +K MQ + LL+ HY +LKD+PFF L++YM S
Sbjct: 11 IKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGLVKYMHS 70
Query: 181 GPVVCMVWQGYEMVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREI 360
GPVV MVW+G +VK GR +LG T P DS PGTIRGDF GRNI+HGSDSVESA++EI
Sbjct: 71 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEI 130
Query: 361 GLWFTAKDLGEYKLCADIWVQE 426
GLWF ++L +Y CA W+ E
Sbjct: 131 GLWFHPEELVDYTSCAQNWIYE 152
>sp|P15532|NDKA_MOUSE Nucleoside diphosphate kinase A (NDK A) (NDP kinase A) (Tumor
metastatic process-associated protein) (Metastasis
inhibition factor NM23) (NDPK-A) (nm23-M1)
Length = 152
Score = 190 bits (482), Expect = 2e-48
Identities = 87/142 (61%), Positives = 109/142 (76%)
Frame = +1
Query: 1 VKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLS 180
+KPDGVQRGLVG II RFEQ+GF+L+ +K +Q + LL+ HY +LKD+PFF L++YM S
Sbjct: 11 IKPDGVQRGLVGEIIKRFEQKGFRLVGLKFLQASEDLLKEHYTDLKDRPFFTGLVKYMHS 70
Query: 181 GPVVCMVWQGYEMVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREI 360
GPVV MVW+G +VK GR +LG T P DS PGTIRGDF GRNI+HGSDSV+SA++EI
Sbjct: 71 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEI 130
Query: 361 GLWFTAKDLGEYKLCADIWVQE 426
LWF ++L EYK CA W+ E
Sbjct: 131 SLWFQPEELVEYKSCAQNWIYE 152
>sp|Q01768|NDKB_MOUSE Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (nm23-M2)
(P18)
Length = 152
Score = 189 bits (480), Expect = 3e-48
Identities = 88/142 (61%), Positives = 111/142 (78%)
Frame = +1
Query: 1 VKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLS 180
+KPDGVQRGLVG II RFEQ+GF+L+A+K ++ ++ L+ HY +LKD+PFFP L++YM S
Sbjct: 11 IKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNS 70
Query: 181 GPVVCMVWQGYEMVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREI 360
GPVV MVW+G +VK GR +LG T P DS PGTIRGDF GRNI+HGSDSVESA++EI
Sbjct: 71 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEI 130
Query: 361 GLWFTAKDLGEYKLCADIWVQE 426
LWF ++L +YK CA WV E
Sbjct: 131 HLWFKPEELIDYKSCAHDWVYE 152
>sp|Q05982|NDKA_RAT Nucleoside diphosphate kinase A (NDK A) (NDP kinase A) (Tumor
metastatic process-associated protein) (Metastasis
inhibition factor NM23)
Length = 152
Score = 189 bits (480), Expect = 3e-48
Identities = 87/142 (61%), Positives = 109/142 (76%)
Frame = +1
Query: 1 VKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLS 180
+KPDGVQRGLVG II RFEQ+GF+L+ +K +Q + LL+ HY +LKD+PFF L++YM S
Sbjct: 11 IKPDGVQRGLVGEIIKRFEQKGFRLVGLKFIQASEDLLKEHYIDLKDRPFFSGLVKYMHS 70
Query: 181 GPVVCMVWQGYEMVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREI 360
GPVV MVW+G +VK GR +LG T P DS PGTIRGDF GRNI+HGSDSVESA++EI
Sbjct: 71 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEI 130
Query: 361 GLWFTAKDLGEYKLCADIWVQE 426
LWF ++L +YK CA W+ E
Sbjct: 131 SLWFQPEELVDYKSCAQNWIYE 152
>sp|P22392|NDKB_HUMAN Nucleoside diphosphate kinase B (NDK B) (NDP kinase B) (nm23-H2)
(C-myc purine-binding transcription factor PUF)
Length = 152
Score = 189 bits (479), Expect = 4e-48
Identities = 87/142 (61%), Positives = 111/142 (78%)
Frame = +1
Query: 1 VKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLS 180
+KPDGVQRGLVG II RFEQ+GF+L+A+K ++ ++ L+ HY +LKD+PFFP L++YM S
Sbjct: 11 IKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNS 70
Query: 181 GPVVCMVWQGYEMVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREI 360
GPVV MVW+G +VK GR +LG T P DS PGTIRGDF GRNI+HGSDSV+SA++EI
Sbjct: 71 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVKSAEKEI 130
Query: 361 GLWFTAKDLGEYKLCADIWVQE 426
LWF ++L +YK CA WV E
Sbjct: 131 SLWFKPEELVDYKSCAHDWVYE 152
>sp|P52174|NDKA_BOVIN Nucleoside diphosphate kinase NBR-A (NDK NBR-A) (NDP kinase NBR-A)
Length = 152
Score = 189 bits (479), Expect = 4e-48
Identities = 87/142 (61%), Positives = 109/142 (76%)
Frame = +1
Query: 1 VKPDGVQRGLVGTIITRFEQRGFKLIAIKMMQPDKKLLEVHYQELKDKPFFPKLIEYMLS 180
+KPDGVQRGL+G II RFEQ+GF+L+A+K M+ + LL+ HY +LKD+PFF L++YM S
Sbjct: 11 IKPDGVQRGLIGEIIKRFEQKGFRLVAMKFMRASEDLLKEHYIDLKDRPFFAGLVKYMHS 70
Query: 181 GPVVCMVWQGYEMVKIGRALLGATRPIDSLPGTIRGDFAQVAGRNIVHGSDSVESAKREI 360
GPVV MVW+G +VK GR +LG T P DS PGTIRGDF GRNI+HGSDSVESA++EI
Sbjct: 71 GPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEI 130
Query: 361 GLWFTAKDLGEYKLCADIWVQE 426
LWF ++L YK CA W+ E
Sbjct: 131 ALWFHPEELVNYKSCAQNWIYE 152
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,639,312
Number of Sequences: 369166
Number of extensions: 1302720
Number of successful extensions: 3562
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3524
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 2871696580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)