Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_I16
(858 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin) 528 e-150
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 528 e-149
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 528 e-149
sp|P41386|TBB_HALDI Tubulin beta chain (Beta tubulin) 528 e-149
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 527 e-149
sp|P02554|TBB_PIG Tubulin beta chain 526 e-149
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 526 e-149
sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin) 524 e-148
sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15) 524 e-148
sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin cla... 524 e-148
>sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin)
Length = 445
Score = 528 bits (1360), Expect = e-150
Identities = 261/286 (91%), Positives = 266/286 (93%)
Frame = +1
Query: 1 LVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVP 180
LVDSVLD+VRKEAESCDCLQGFQ KIREEYPDR+M TFSVVP
Sbjct: 112 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Query: 181 SPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 360
SPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSA
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 361 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 540
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 541 QIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 720
Q+FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 721 AVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 858
AVCDIPPRGLKMSSTFIGNSTAIQELFKR+SEQFTAMFRRKAFLHW
Sbjct: 352 AVCDIPPRGLKMSSTFIGNSTAIQELFKRMSEQFTAMFRRKAFLHW 397
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 528 bits (1359), Expect = e-149
Identities = 260/286 (90%), Positives = 266/286 (93%)
Frame = +1
Query: 1 LVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVP 180
LVDSVLD+VRKEAESCDCLQGFQ KIREEYPDR+M TFSVVP
Sbjct: 112 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Query: 181 SPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 360
SPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSA
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 361 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 540
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 541 QIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 720
Q+FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 721 AVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 858
AVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRRKAFLHW
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 528 bits (1359), Expect = e-149
Identities = 260/286 (90%), Positives = 266/286 (93%)
Frame = +1
Query: 1 LVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVP 180
LVDSVLD+VRKEAESCDCLQGFQ KIREEYPDR+M TFSVVP
Sbjct: 112 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Query: 181 SPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 360
SPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSA
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 361 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 540
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 541 QIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 720
Q+FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 721 AVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 858
AVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRRKAFLHW
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>sp|P41386|TBB_HALDI Tubulin beta chain (Beta tubulin)
Length = 341
Score = 528 bits (1359), Expect = e-149
Identities = 260/286 (90%), Positives = 266/286 (93%)
Frame = +1
Query: 1 LVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVP 180
LVDSVLD+VRKEAESCDCLQGFQ KIREEYPDR+M TFSVVP
Sbjct: 38 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 97
Query: 181 SPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 360
SPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSA
Sbjct: 98 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 157
Query: 361 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 540
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ
Sbjct: 158 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 217
Query: 541 QIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 720
Q+FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT
Sbjct: 218 QMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 277
Query: 721 AVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 858
AVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRRKAFLHW
Sbjct: 278 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 323
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 527 bits (1358), Expect = e-149
Identities = 259/286 (90%), Positives = 266/286 (93%)
Frame = +1
Query: 1 LVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVP 180
LVDSVLD+VRKEAESCDCLQGFQ KIREEYPDR+M TFSVVP
Sbjct: 112 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Query: 181 SPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 360
SPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSA
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 361 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 540
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 541 QIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 720
Q+FDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 721 AVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 858
AVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRRKAFLHW
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>sp|P02554|TBB_PIG Tubulin beta chain
Length = 445
Score = 526 bits (1355), Expect = e-149
Identities = 258/286 (90%), Positives = 266/286 (93%)
Frame = +1
Query: 1 LVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVP 180
LVDSVLD+VRKE+ESCDCLQGFQ KIREEYPDR+M TFSVVP
Sbjct: 112 LVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Query: 181 SPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 360
SPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSA
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 361 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 540
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 541 QIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 720
Q+FDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 721 AVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 858
AVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRRKAFLHW
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 526 bits (1354), Expect = e-149
Identities = 258/286 (90%), Positives = 265/286 (92%)
Frame = +1
Query: 1 LVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVP 180
LVDSVLD+VRKEAESCDCLQGFQ KIREEYPDR+M TFSVVP
Sbjct: 112 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Query: 181 SPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 360
SPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSA
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 361 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 540
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 541 QIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 720
Q+FDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT
Sbjct: 292 QVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 721 AVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 858
AVCDIPPRGLKM+ TFIGNSTAIQELFKR+SEQFTAMFRRKAFLHW
Sbjct: 352 AVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin)
Length = 447
Score = 524 bits (1350), Expect = e-148
Identities = 257/286 (89%), Positives = 265/286 (92%)
Frame = +1
Query: 1 LVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVP 180
LVDSVLD+VRKEAESCDCLQGFQ KIREEYPDR+M T+SVVP
Sbjct: 112 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTYSVVP 171
Query: 181 SPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 360
SPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVS
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSL 231
Query: 361 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 540
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 541 QIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 720
Q+FDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLN+QNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKT 351
Query: 721 AVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 858
AVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRRKAFLHW
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>sp|P04691|TBB1_RAT Tubulin beta chain (T beta-15)
Length = 445
Score = 524 bits (1350), Expect = e-148
Identities = 257/286 (89%), Positives = 266/286 (93%)
Frame = +1
Query: 1 LVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVP 180
LVDSVLD+VRKE+ESCDCLQGFQ KIREEYPDR+M TFSV+P
Sbjct: 112 LVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMP 171
Query: 181 SPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 360
SPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSA
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 361 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 540
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 541 QIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 720
Q+FD+KNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 721 AVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 858
AVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRRKAFLHW
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
>sp|P32882|TBB2_CHICK Tubulin beta-2 chain (Beta-tubulin class-II)
Length = 445
Score = 524 bits (1350), Expect = e-148
Identities = 257/286 (89%), Positives = 266/286 (93%)
Frame = +1
Query: 1 LVDSVLDIVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRVMLTFSVVP 180
LVDSVLD+VRKE+ESCDCLQGFQ KIREEYPDR+M TFSV+P
Sbjct: 112 LVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMP 171
Query: 181 SPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 360
SPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKLTTPTYGDLNHLVSA
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 361 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 540
TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 541 QIFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 720
Q+FD+KNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT
Sbjct: 292 QMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 721 AVCDIPPRGLKMSSTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHW 858
AVCDIPPRGLKMS+TFIGNSTAIQELFKR+SEQFTAMFRRKAFLHW
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHW 397
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,576,334
Number of Sequences: 369166
Number of extensions: 1662712
Number of successful extensions: 4981
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4489
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8486520240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)