Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_I07
(866 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q94529|GS1_DROME GS1-like protein 119 1e-26
sp|Q08623|HDD1A_HUMAN Haloacid dehalogenase-like hydrolase ... 114 3e-25
sp|O14165|YDX1_SCHPO Hypothetical protein C4C5.01 in chromo... 60 6e-09
sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphat... 47 9e-05
sp|P44004|Y488_HAEIN Hypothetical protein HI0488 42 0.002
sp|P77625|YFBT_ECOLI Phosphatase yfbT 36 0.16
sp|Q04541|CBBYP_RALEU Protein cbbY, plasmid 33 0.78
sp|P38773|DOG2_YEAST 2-deoxyglucose-6-phosphate phosphatase... 33 1.0
sp|P40119|CBBYC_RALEU Protein cbbY, chromosomal 32 2.3
sp|P35815|PP2CB_RAT Protein phosphatase 2C beta isoform (PP... 31 5.1
>sp|Q94529|GS1_DROME GS1-like protein
Length = 231
Score = 119 bits (297), Expect = 1e-26
Identities = 67/223 (30%), Positives = 114/223 (51%)
Frame = +1
Query: 91 ITHVIFDLDGVLVNSVRYFELFVNKLCKPXXXXXXXXXXXXXXXXXXXSVAKILIKELGL 270
+TH +FD+DG+L+++ R + + + +P +A+ +++ L
Sbjct: 9 VTHCVFDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVEHYEL 68
Query: 271 PMTRNEFINYYKEVTPCLLKNVELLPGVSQLIEYFRKHRMPMAVVTESNEENYNYKISRH 450
PM+ E+ + T L++N +L+PG +L+ + +++P + T S + K ++H
Sbjct: 69 PMSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELKTAQH 128
Query: 451 KIIFDKISFAVCYGSDPEARKRKPEPYIYEIAASRFKENVPSGPYNILVFEDTADGVDAA 630
+ +F + VC SD E KP P I+ +AA RF VP P + LVFED+ +GV AA
Sbjct: 129 RELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRF--GVPPKPSDCLVFEDSPNGVTAA 186
Query: 631 LAARMKVVWIADSVIDVSVHDFHRDLMVIDSLDNFKPELLRLP 759
+A M+VV + D +S V+ SL +FKPE LP
Sbjct: 187 NSAGMQVVMVPDP--RLSQEKTSHATQVLASLADFKPEQFGLP 227
>sp|Q08623|HDD1A_HUMAN Haloacid dehalogenase-like hydrolase domain containing protein 1A
(GS1 protein)
Length = 214
Score = 114 bits (285), Expect = 3e-25
Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 5/221 (2%)
Frame = +1
Query: 112 LDGVLVNSVRYFELFVNKLCKPXXXXXXXXXXXXXXXXXXXSVAKILIKELGLPMTRNEF 291
+DG+L+++ R + + ++C A+I+I L LPM++ E
Sbjct: 1 MDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEEL 60
Query: 292 INYYKEVTPCLLKNVELLPGVSQLIEYFRKHRMPMAVVTESNEENYNYKISRHKIIFDKI 471
+ + + L+PG +LI + RKH +P A+ T S +++ K SRHK F
Sbjct: 61 VEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLF 120
Query: 472 SFAVCYGSDPEARKRKPEPYIYEIAASRFKENVPSGPYNILVFEDTADGVDAALAARMKV 651
S V G DPE + KP+P I+ A RF + P LVFED +GV+AALAA M+V
Sbjct: 121 SHIV-LGDDPEVQHGKPDPDIFLACAKRF--SPPPAMEKCLVFEDAPNGVEAALAAGMQV 177
Query: 652 VWIADSVIDVSVHDFHRDL-----MVIDSLDNFKPELLRLP 759
V + D + RDL +V++SL +F+PEL LP
Sbjct: 178 VMVPDG-------NLSRDLTTKATLVLNSLQDFQPELFGLP 211
>sp|O14165|YDX1_SCHPO Hypothetical protein C4C5.01 in chromosome I
Length = 246
Score = 60.5 bits (145), Expect = 6e-09
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 9/224 (4%)
Frame = +1
Query: 103 IFDLDGVLVNSVRYFELFVNKLCKPXXXXXXXXXXXXXXXXXXXSVA-KILIKELGLPMT 279
+FD+DG+LV+S + N + S A K++I +PMT
Sbjct: 12 LFDMDGLLVDSETIYTKTTNLILDRYGKDPLPISVKAQMMGRPGSAAAKVVIDWSNIPMT 71
Query: 280 RNEFINYYKEVTPCLLKNVELLPGVSQLIEYFRKHRMPMAVVTESNEENYNYKISRHKII 459
+F++ + + +++ +PG LI H + + V T K + K I
Sbjct: 72 PQQFVDEQQVIRAKFWSSLKPMPGAESLINNLSNHGIDIGVCTHPYAI---IKTAHLKHI 128
Query: 460 FDKISFAVCYGSDPEARKRKPEPY-------IYEIAASRFKENVPS-GPYNILVFEDTAD 615
F+K V G +P + +P+ + I SR + + + P + FED+
Sbjct: 129 FEKFGKNVITGDNPSIAPGRGKPFPDIWLKVLNLINESRKQRGLKALTPSQCIAFEDSIP 188
Query: 616 GVDAALAARMKVVWIADSVIDVSVHDFHRDLMVIDSLDNFKPEL 747
GV +A AA M V+W+ D+ I V D + ++DS P L
Sbjct: 189 GVKSAKAAGMHVIWVPDAAIKNLVGDQLNE--IVDSQCETLPSL 230
>sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM1254
Length = 216
Score = 46.6 bits (109), Expect = 9e-05
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 4/190 (2%)
Frame = +1
Query: 100 VIFDLDGVLVNSVR-YFELFVNKLCKPXXXXXXXXXXXXXXXXXXXSVAKILIKELGLPM 276
VIFD+DGVL+++ YFE + ++ + IL++ L +
Sbjct: 4 VIFDMDGVLMDTEPLYFEAY-RRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKD 62
Query: 277 TRNEFINYYKEVTPCLLKNVELL---PGVSQLIEYFRKHRMPMAVVTESNEENYNYKISR 447
+ F E + ELL PGV + +E+ + R+ +A+ T + + ++ R
Sbjct: 63 SLENFKKRVHEEKKRVFS--ELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRR 120
Query: 448 HKIIFDKISFAVCYGSDPEARKRKPEPYIYEIAASRFKENVPSGPYNILVFEDTADGVDA 627
+ +K + +G + + KP+P IY + R NV P ++VFED+ GV+A
Sbjct: 121 --LDLEKYFDVMVFGD--QVKNGKPDPEIYLLVLERL--NVV--PEKVVVFEDSKSGVEA 172
Query: 628 ALAARMKVVW 657
A +A ++ ++
Sbjct: 173 AKSAGIERIY 182
>sp|P44004|Y488_HAEIN Hypothetical protein HI0488
Length = 200
Score = 42.4 bits (98), Expect = 0.002
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 8/203 (3%)
Frame = +1
Query: 67 DIEIRNAPITHVIFDLDGVLVNSVRYFELFVNKLCKPXXXXXXXXXXXXXXXXXXXSVAK 246
D EI N P +IFD+DG L++++ + K ++A
Sbjct: 3 DYEIFN-PYEGLIFDMDGTLIDTMPVHAQAWTMVGKKFGYEFDFQIMYNFGGATVRTIAG 61
Query: 247 ILIKELGLPMTRNEFINYYKEVTPCLLKNVELLPGVSQLIEYFR-----KHRMPMAVVTE 411
++K +P+ R E + K + +L+P S+L+ F + P+A+ +
Sbjct: 62 EMMKAANMPLDRIEDVLAAKREL-----SYQLIPTQSKLLPTFEIVKSFHQKKPIALGSG 116
Query: 412 SNEENYNYKISRHKIIFDKISFAVCYG---SDPEARKRKPEPYIYEIAASRFKENVPSGP 582
S+ + + ++ DK++ A + S + ++ KP P + R E + + P
Sbjct: 117 SHRKIID-------MLMDKLAIAPYFNAIVSADDVKEHKPHPETF----LRCAELIQANP 165
Query: 583 YNILVFEDTADGVDAALAARMKV 651
+VFED GV A L+A M V
Sbjct: 166 SRCIVFEDADLGVQAGLSAGMDV 188
>sp|P77625|YFBT_ECOLI Phosphatase yfbT
Length = 216
Score = 35.8 bits (81), Expect = 0.16
Identities = 45/188 (23%), Positives = 73/188 (38%), Gaps = 4/188 (2%)
Frame = +1
Query: 103 IFDLDGVLVNSVRYFELFVNKLCKPXXXXXXXXXXXXXXXXXXXSVAKILI----KELGL 270
+FDLDG LV+S+ E + + S+ + ++
Sbjct: 7 LFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIHGKQAITSLRHFMAGKSEADIAA 66
Query: 271 PMTRNEFINYYKEVTPCLLKNVELLPGVSQLIEYFRKHRMPMAVVTESNEENYNYKISRH 450
TR E I E T + + LPG L+ + K +P A+VT + +RH
Sbjct: 67 EFTRLEHI----EATET--EGITALPGAIALLSHLNKAGIPWAIVTSG---SMPVARARH 117
Query: 451 KIIFDKISFAVCYGSDPEARKRKPEPYIYEIAASRFKENVPSGPYNILVFEDTADGVDAA 630
KI + + + ++ KPEP Y + A + + P +V ED GV +
Sbjct: 118 KIA--GLPAPEVFVTAERVKRGKPEPDAYLLGA----QLLGLAPQECVVVEDAPAGVLSG 171
Query: 631 LAARMKVV 654
LAA V+
Sbjct: 172 LAAGCHVI 179
>sp|Q04541|CBBYP_RALEU Protein cbbY, plasmid
Length = 254
Score = 33.5 bits (75), Expect = 0.78
Identities = 29/105 (27%), Positives = 49/105 (46%)
Frame = +1
Query: 340 LLPGVSQLIEYFRKHRMPMAVVTESNEENYNYKISRHKIIFDKISFAVCYGSDPEARKRK 519
L PG+++LI + +P+A+ T + N + + H + FA + A K K
Sbjct: 97 LRPGIARLIAEAGEAGLPLAIATTTTPANLDALLQAHLGADWRGRFAAICDAGTTAIK-K 155
Query: 520 PEPYIYEIAASRFKENVPSGPYNILVFEDTADGVDAALAARMKVV 654
P P +Y R + +G + L ED+ +G+ AA AA + V
Sbjct: 156 PAPDVYLAVLERL--GLEAG--DCLAIEDSGNGLRAARAAGIPTV 196
>sp|P38773|DOG2_YEAST 2-deoxyglucose-6-phosphate phosphatase 2 (2-DOG-6-P 2)
(2-deoxyglucose-6-phosphatase 2)
Length = 246
Score = 33.1 bits (74), Expect = 1.0
Identities = 48/218 (22%), Positives = 84/218 (38%), Gaps = 12/218 (5%)
Frame = +1
Query: 103 IFDLDGVLVNSVRYFELFVNKLCKPXXXXXXXXXXXXXXXXXXXSVAKILIKELGLPMTR 282
+FDLDG +V++ E KLC+ + K K L T
Sbjct: 10 LFDLDGTIVSTTTAAESAWKKLCRQHGVDPVELFKHSHGARSQEMMKKFFPK---LDNTD 66
Query: 283 NE-FINYYKEVTPCLLKNVELLPGVSQL-----IEYFRKHRMP---MAVVTESNEENYNY 435
N+ + K++ L V L+PG L ++ + ++P A+VT +
Sbjct: 67 NKGVLALEKDMADNYLDTVSLIPGAENLLLSLDVDTETQKKLPERKWAIVTSGSP---YL 123
Query: 436 KISRHKIIFDKISFAVCYGSDPEARKRKPEPYIYEIAASRFKENVP-SGPYNI--LVFED 606
S + I + + + + + KP+P Y A ++++ +G ++ +VFED
Sbjct: 124 AFSWFETILKNVGKPKVFITGFDVKNGKPDPEGYSRARDLLRQDLQLTGKQDLKYVVFED 183
Query: 607 TADGVDAALAARMKVVWIADSVIDVSVHDFHRDLMVID 720
G+ A A V I S + D D +V D
Sbjct: 184 APVGIKAGKAMGAITVGITSSYDKSVLFDAGADYVVCD 221
>sp|P40119|CBBYC_RALEU Protein cbbY, chromosomal
Length = 254
Score = 32.0 bits (71), Expect = 2.3
Identities = 29/105 (27%), Positives = 49/105 (46%)
Frame = +1
Query: 340 LLPGVSQLIEYFRKHRMPMAVVTESNEENYNYKISRHKIIFDKISFAVCYGSDPEARKRK 519
L PG+++LI+ + +P+A+ T + N + + + FA + A K K
Sbjct: 97 LRPGIARLIDEAGEAGLPLAIATTTTPANLDALLQAPLGADWRRRFAAIGDAGTTAIK-K 155
Query: 520 PEPYIYEIAASRFKENVPSGPYNILVFEDTADGVDAALAARMKVV 654
P P +Y R + G + L ED+A+G+ AA AA + V
Sbjct: 156 PAPDVYLAVLERL--GLEGG--DCLAIEDSANGLRAARAAGIPTV 196
>sp|P35815|PP2CB_RAT Protein phosphatase 2C beta isoform (PP2C-beta) (IA) (Protein
phosphatase 1B)
Length = 390
Score = 30.8 bits (68), Expect = 5.1
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 490 GSDPEARKRKPEPYIYEIAASRFKENVP---SGPYNILVFEDTADGVDAALAARMKVVWI 660
G P + PEP +YEI + E V G ++++ E+ + V++ L + +
Sbjct: 212 GKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVNSRLEVSDDLENV 271
Query: 661 ADSVIDVSVHDFHRDLMVI 717
+ V+D +H RD M I
Sbjct: 272 CNWVVDTCLHKGSRDNMSI 290
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,671,952
Number of Sequences: 369166
Number of extensions: 1327170
Number of successful extensions: 3252
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3246
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8550075140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)