Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_H03
(828 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P12716|ACTC_PISOC Actin, cytoplasmic 551 e-157
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 550 e-156
sp|P10987|ACT1_DROME Actin-5C >gi|67462113|sp|P84183|ACT4_B... 548 e-156
sp|Q93131|ACTC_BRAFL Actin, cytoplasmic (BfCA1) 548 e-156
sp|P30163|ACT2_ONCVO Actin-2 548 e-156
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 548 e-156
sp|O17320|ACT_CRAGI Actin 548 e-156
sp|Q93129|ACTC_BRABE Actin, cytoplasmic (BbCA1) 548 e-156
sp|Q25010|ACT3A_HELAM Actin, cytoplasmic A3a 548 e-156
sp|P17126|ACT_HYDAT Actin, non-muscle 6.2 548 e-156
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 551 bits (1420), Expect = e-157
Identities = 269/275 (97%), Positives = 273/275 (99%)
Frame = +3
Query: 3 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 182
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 183 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 362
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
Query: 363 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLTDYLMKI 542
YVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAI R+DLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
Query: 543 LTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 722
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEMQTAASSSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 253
Query: 723 ERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDV 827
ERFRCPEALFQPSFLGME+AGIHETTYNSIMKCDV
Sbjct: 254 ERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDV 288
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 550 bits (1416), Expect = e-156
Identities = 268/275 (97%), Positives = 272/275 (98%)
Frame = +3
Query: 3 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 182
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 183 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 362
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
Query: 363 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLTDYLMKI 542
YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI R+DLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKI 193
Query: 543 LTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 722
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEMQTA SSSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGN 253
Query: 723 ERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDV 827
ERFRCPEALFQPSFLGME AGIHETTYNSIMKCDV
Sbjct: 254 ERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDV 288
>sp|P10987|ACT1_DROME Actin-5C
sp|P84183|ACT4_BOMMO Actin, cytoplasmic A4
sp|P84184|ACT3B_HELAM Actin, cytoplasmic A3b
sp|P84185|ACT1D_ANOGA Actin, cytoplasmic 1D
Length = 376
Score = 548 bits (1413), Expect = e-156
Identities = 268/275 (97%), Positives = 271/275 (98%)
Frame = +3
Query: 3 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 182
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 183 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 362
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
Query: 363 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLTDYLMKI 542
YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
Query: 543 LTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 722
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 253
Query: 723 ERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDV 827
ERFRCPEALFQPSFLGME GIHETTYNSIMKCDV
Sbjct: 254 ERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDV 288
>sp|Q93131|ACTC_BRAFL Actin, cytoplasmic (BfCA1)
Length = 375
Score = 548 bits (1413), Expect = e-156
Identities = 266/275 (96%), Positives = 272/275 (98%)
Frame = +3
Query: 3 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 182
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 13 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 72
Query: 183 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 362
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM
Sbjct: 73 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 132
Query: 363 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLTDYLMKI 542
YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLTDYLMKI
Sbjct: 133 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 192
Query: 543 LTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 722
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQVITIGN
Sbjct: 193 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSYELPDGQVITIGN 252
Query: 723 ERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDV 827
ERFRCPE+LFQPSFLGME+ G+HETTYNSIMKCD+
Sbjct: 253 ERFRCPESLFQPSFLGMESTGVHETTYNSIMKCDI 287
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 548 bits (1413), Expect = e-156
Identities = 266/275 (96%), Positives = 273/275 (99%)
Frame = +3
Query: 3 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 182
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 183 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 362
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
Query: 363 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLTDYLMKI 542
YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI R+DLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
Query: 543 LTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 722
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQVIT+GN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGN 253
Query: 723 ERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDV 827
ERFRCPEALFQPSFLGME+AGIHETTYNSIMKCD+
Sbjct: 254 ERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDI 288
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 548 bits (1412), Expect = e-156
Identities = 266/275 (96%), Positives = 273/275 (99%)
Frame = +3
Query: 3 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 182
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 183 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 362
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
Query: 363 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLTDYLMKI 542
YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI R+DLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKI 193
Query: 543 LTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 722
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEMQTA++SSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGN 253
Query: 723 ERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDV 827
ERFRCPEA+FQPSFLGME AGIHETTYNSIMKCDV
Sbjct: 254 ERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDV 288
>sp|O17320|ACT_CRAGI Actin
Length = 376
Score = 548 bits (1412), Expect = e-156
Identities = 267/275 (97%), Positives = 273/275 (99%)
Frame = +3
Query: 3 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 182
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 183 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 362
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 133
Query: 363 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLTDYLMKI 542
YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKI 193
Query: 543 LTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 722
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGN 253
Query: 723 ERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDV 827
ERFRCPEA+FQPSFLGME++GIHET+YNSIMKCDV
Sbjct: 254 ERFRCPEAMFQPSFLGMESSGIHETSYNSIMKCDV 288
>sp|Q93129|ACTC_BRABE Actin, cytoplasmic (BbCA1)
Length = 375
Score = 548 bits (1412), Expect = e-156
Identities = 266/275 (96%), Positives = 272/275 (98%)
Frame = +3
Query: 3 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 182
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 13 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 72
Query: 183 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 362
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM
Sbjct: 73 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 132
Query: 363 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLTDYLMKI 542
YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLTDYLMKI
Sbjct: 133 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 192
Query: 543 LTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 722
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQVITIGN
Sbjct: 193 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 252
Query: 723 ERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDV 827
ERFRCPE+LFQPSFLGME+ G+HETTYNSIMKCD+
Sbjct: 253 ERFRCPESLFQPSFLGMESTGVHETTYNSIMKCDI 287
>sp|Q25010|ACT3A_HELAM Actin, cytoplasmic A3a
Length = 376
Score = 548 bits (1411), Expect = e-156
Identities = 268/275 (97%), Positives = 271/275 (98%)
Frame = +3
Query: 3 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 182
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 183 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 362
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
Query: 363 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLTDYLMKI 542
YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
Query: 543 LTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 722
LTERGYSFTTTAEREIVRDIKEKLCY+ALDFEQEM TAASSSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGN 253
Query: 723 ERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDV 827
ERFRCPEALFQPSFLGME GIHETTYNSIMKCDV
Sbjct: 254 ERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDV 288
>sp|P17126|ACT_HYDAT Actin, non-muscle 6.2
Length = 376
Score = 548 bits (1411), Expect = e-156
Identities = 268/275 (97%), Positives = 272/275 (98%)
Frame = +3
Query: 3 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 182
GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE
Sbjct: 14 GSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
Query: 183 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 362
HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM
Sbjct: 74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 133
Query: 363 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAICRMDLAGRDLTDYLMKI 542
YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI R+DLAGRDLTDYLMKI
Sbjct: 134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKI 193
Query: 543 LTERGYSFTTTAEREIVRDIKEKLCYIALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 722
LTERGYSFTTTAEREIVRDIKEKL Y+ALDFEQEMQTAASSSSLEKSYELPDGQVITIGN
Sbjct: 194 LTERGYSFTTTAEREIVRDIKEKLSYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGN 253
Query: 723 ERFRCPEALFQPSFLGMETAGIHETTYNSIMKCDV 827
ERFRCPE LFQPSF+GME+AGIHETTYNSIMKCDV
Sbjct: 254 ERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDV 288
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,271,527
Number of Sequences: 369166
Number of extensions: 2009984
Number of successful extensions: 6360
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6197
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8004331590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)