Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_G17
(861 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 383 e-106
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 381 e-105
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 379 e-105
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 376 e-104
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 373 e-103
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 369 e-102
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 368 e-101
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 359 5e-99
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 358 1e-98
sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP... 336 6e-92
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 383 bits (984), Expect = e-106
Identities = 184/285 (64%), Positives = 222/285 (77%)
Frame = +2
Query: 5 VNTLPKNVRDYIIEKANICIPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVR 184
+++LP+ VR+++ A +C PDHI +CDGSEEEN L+ + ++G ++ L KY+NCWL
Sbjct: 20 LDSLPQAVREFLENNAELCQPDHIHICDGSEEENGRLLGQMEEEGILRRLKKYDNCWLAL 79
Query: 185 TDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGR 364
TDP DVAR+ESKT I T+ +R T+P Q LG WMSE D E A N RFPGCMKGR
Sbjct: 80 TDPRDVARIESKTVIVTQEQRDTVPIPKTGLSQ--LGRWMSEEDFEKAFNARFPGCMKGR 137
Query: 365 TMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSV 544
TMYVIPFSMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSV
Sbjct: 138 TMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSV 196
Query: 545 GVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILAR 724
G PLP ++ ++N WPCNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA+
Sbjct: 197 GCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAK 256
Query: 725 DEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIP 859
+E W AEHMLILG+T P GEK Y+ AAFPSACGKTNLAM+ P++P
Sbjct: 257 EEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLP 301
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 381 bits (978), Expect = e-105
Identities = 184/285 (64%), Positives = 221/285 (77%)
Frame = +2
Query: 5 VNTLPKNVRDYIIEKANICIPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVR 184
+++LP+ VR ++ A +C PDHI +CDGSEEEN L+ + ++G ++ L KY+NCWL
Sbjct: 20 LDSLPQAVRKFLENNAELCQPDHIHICDGSEEENGRLLGQMEEEGILRRLKKYDNCWLAL 79
Query: 185 TDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGR 364
TDP DVAR+ SKT I T+ +R T+P Q LG WMSE D E ALN RFPGCMKGR
Sbjct: 80 TDPRDVARIGSKTVIVTQEQRDTVPIPKTGLSQ--LGRWMSEEDFEKALNARFPGCMKGR 137
Query: 365 TMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSV 544
TMYVIPFSMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSV
Sbjct: 138 TMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSV 196
Query: 545 GVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILAR 724
G PLP ++ ++N WPCNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA+
Sbjct: 197 GCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAK 256
Query: 725 DEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIP 859
+E W AEHMLILG+T P GEK Y+ AAFPSACGKTNLAM+ P++P
Sbjct: 257 EEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLP 301
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 379 bits (973), Expect = e-105
Identities = 182/285 (63%), Positives = 220/285 (77%)
Frame = +2
Query: 5 VNTLPKNVRDYIIEKANICIPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVR 184
+++LP+ VR ++ A +C PD + +CDGSEEEN+ L+ + ++G +K L KY+NCWL
Sbjct: 20 LDSLPQAVRSFVESSAKLCRPDQVHICDGSEEENRQLLSHMEEEGVIKRLKKYDNCWLAL 79
Query: 185 TDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGR 364
TDP DVAR+ESKT I T+ +R T+P + Q LG WMSE D E A N RFPGCMKGR
Sbjct: 80 TDPRDVARIESKTVIITREQRDTVPIPKNGLSQ--LGRWMSEEDFEKAFNIRFPGCMKGR 137
Query: 365 TMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSV 544
TMYVIPFSMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSV
Sbjct: 138 TMYVIPFSMGPLGSPLSKIGIELTDSPYVVTSMRIMTRMGTSVLEALGDGE-FVKCLHSV 196
Query: 545 GVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILAR 724
G PLP ++ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA+
Sbjct: 197 GCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAK 256
Query: 725 DEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIP 859
+E W AEHMLILG+T P G+K Y AAFPSACGKTNLAM+ PT+P
Sbjct: 257 EEGWLAEHMLILGITNPKGQKKYFAAAFPSACGKTNLAMMNPTLP 301
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 376 bits (965), Expect = e-104
Identities = 182/286 (63%), Positives = 220/286 (76%)
Frame = +2
Query: 2 EVNTLPKNVRDYIIEKANICIPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLV 181
++ +LP VR++I A +C P+ I +CDGSEEENK +++ +V+QG +K L+KYENCWL
Sbjct: 19 DLESLPPQVREFIESNAKLCQPESIHICDGSEEENKKILDIMVEQGMIKKLSKYENCWLA 78
Query: 182 RTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKG 361
T+P DVAR+ESKT I T+ +R TIP Q LG WMSE D E A N RFPGCM+G
Sbjct: 79 LTNPRDVARIESKTVIITQEQRDTIPIPKTGSSQ--LGRWMSEEDFEKAFNTRFPGCMQG 136
Query: 362 RTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHS 541
RTMYVIPFSMGPIG PL+KIGIELTDSPYVV SM++MTRMG L+++ + FVK LHS
Sbjct: 137 RTMYVIPFSMGPIGSPLAKIGIELTDSPYVVASMRMMTRMGTAALKALGNGE-FVKCLHS 195
Query: 542 VGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILA 721
VG PLP + +IN WPCNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S +A
Sbjct: 196 VGCPLPLKEPLINNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRIA 255
Query: 722 RDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIP 859
++E W AEHMLILG+T P GEK Y AAFPSACGKTNLAM+ P+ P
Sbjct: 256 KEEGWLAEHMLILGITNPEGEKKYFAAAFPSACGKTNLAMMNPSRP 301
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 373 bits (958), Expect = e-103
Identities = 178/285 (62%), Positives = 220/285 (77%)
Frame = +2
Query: 5 VNTLPKNVRDYIIEKANICIPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVR 184
+++LP+ VR ++ A +C P++I +CDGSEEE L+ + ++G ++ L KY+NCWL
Sbjct: 20 LDSLPQEVRKFVEGNAQLCQPEYIHICDGSEEEYGRLLAHMQEEGVIRKLKKYDNCWLAL 79
Query: 185 TDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGR 364
TDP DVAR+ESKT I T+ +R T+P Q +LG WMSE D E A N RFPGCMKGR
Sbjct: 80 TDPRDVARIESKTVIITQEQRDTVPIPKSG--QSQLGRWMSEEDFEKAFNARFPGCMKGR 137
Query: 365 TMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSV 544
TMYVIPFSMGP+G PL+KIGIELTDSPYVV SM+IMTRMG VLE++ D F+K LHSV
Sbjct: 138 TMYVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGTSVLEALGDGE-FIKCLHSV 196
Query: 545 GVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILAR 724
G PLP ++ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA+
Sbjct: 197 GCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAK 256
Query: 725 DEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIP 859
+E W AEHMLILG+T P G+K Y+ AAFPSACGKTNLAM+ PT+P
Sbjct: 257 EEGWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPTLP 301
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 369 bits (946), Expect = e-102
Identities = 178/284 (62%), Positives = 220/284 (77%)
Frame = +2
Query: 5 VNTLPKNVRDYIIEKANICIPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVR 184
V+ L VR ++ E +C PD + +CDGSE+ENK+LI+ L++ G++ L KY+NCWL R
Sbjct: 45 VDLLTTGVRAFVEEGIALCQPDQVHICDGSEQENKVLIKSLLEAGTIVPLPKYDNCWLAR 104
Query: 185 TDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGR 364
T+PADVARVES+TFI T+ + TIP T ++G LGNW+S SDM+AA+ RFPGCMKGR
Sbjct: 105 TNPADVARVESRTFICTERREETIP-TPVEGVKGTLGNWISPSDMDAAVQQRFPGCMKGR 163
Query: 365 TMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSV 544
TMYV+PFSMGP+G PLSKIGIELTDS YVV SM+IMTRMG VL + FV+ALHSV
Sbjct: 164 TMYVVPFSMGPVGSPLSKIGIELTDSAYVVASMRIMTRMGAAVLRQLAKKEEFVRALHSV 223
Query: 545 GVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILAR 724
G P + + WPC+PE+T+I H PA+N I S+GSGYGGNSLLGKKCFALR+GS +A+
Sbjct: 224 GAPANGQVEQPS-WPCDPERTIILHKPAENLIVSYGSGYGGNSLLGKKCFALRIGSTIAK 282
Query: 725 DEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTI 856
E W AEHMLILG+T P GEK YITAAFPSACGKTNLAM+ P++
Sbjct: 283 QEGWLAEHMLILGITDPKGEKKYITAAFPSACGKTNLAMLNPSL 326
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 368 bits (945), Expect = e-101
Identities = 177/285 (62%), Positives = 219/285 (76%)
Frame = +2
Query: 5 VNTLPKNVRDYIIEKANICIPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVR 184
+++LP+ VR ++ A +C P++I +CDGSEEE L+ + ++G ++ L KY+NCWL
Sbjct: 20 LDSLPQAVRKFVEGNAQLCQPEYIHICDGSEEEYGQLLAHMQEEGVIRKLKKYDNCWLAL 79
Query: 185 TDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGR 364
TDP DVAR+ESKT I T+ +R T+P Q LG WMSE D E A N RFPGCMKGR
Sbjct: 80 TDPRDVARIESKTVIITQEQRDTVPIPKTGLSQ--LGRWMSEEDFEKAFNARFPGCMKGR 137
Query: 365 TMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSV 544
TMYVIPFSMGP+G PL+KIGIELTDSPYVV SM+IMTRMG VLE++ D F+K LHSV
Sbjct: 138 TMYVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGISVLEALGDGE-FIKCLHSV 196
Query: 545 GVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILAR 724
G PLP ++ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA+
Sbjct: 197 GCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAK 256
Query: 725 DEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIP 859
+E W AEHMLILG+T P G+K Y+ AAFPSACGKTNLAM+ P++P
Sbjct: 257 EEGWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPSLP 301
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 359 bits (922), Expect = 5e-99
Identities = 170/286 (59%), Positives = 217/286 (75%)
Frame = +2
Query: 2 EVNTLPKNVRDYIIEKANICIPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLV 181
+++ LP VRD++ A++C P+ I +CDG+E EN ++ L +QG ++ L KY+NCWL
Sbjct: 36 DMSQLPAGVRDFVARSAHLCQPEGIHICDGTEAENTAILALLEEQGLIRKLPKYKNCWLA 95
Query: 182 RTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKG 361
RTDP DVARVESKT I T +R T+P + +G+LGNWMS + + A+++RFPGCM+G
Sbjct: 96 RTDPKDVARVESKTVIVTPSQRDTVPLLAGGA-RGQLGNWMSPDEFQRAVDERFPGCMQG 154
Query: 362 RTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHS 541
R MYV+PFSMGP+G PLS+IG++LTDS YVV SM+IMTR+G VL+++ D F+K LHS
Sbjct: 155 RIMYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FIKCLHS 213
Query: 542 VGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILA 721
VG PL + WPCNPEKTLI H+P + EI SFGSGYGGNSLLGKKCFALR+ S LA
Sbjct: 214 VGQPLTGHGDPVGQWPCNPEKTLIGHVPDQREIVSFGSGYGGNSLLGKKCFALRIASRLA 273
Query: 722 RDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIP 859
RDE W AEHMLILG+T P G+K Y+ AAFPSACGKTNLAM+ P +P
Sbjct: 274 RDEGWLAEHMLILGITNPAGKKRYVAAAFPSACGKTNLAMMRPALP 319
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 358 bits (919), Expect = 1e-98
Identities = 171/286 (59%), Positives = 214/286 (74%)
Frame = +2
Query: 2 EVNTLPKNVRDYIIEKANICIPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLV 181
++ LP +RD++ A +C P+ I +CDG+E EN + L +QG ++ L KY NCWL
Sbjct: 36 DLGQLPTGIRDFVEHSARLCQPEGIHICDGTEAENTATLTLLEQQGLIRKLPKYNNCWLA 95
Query: 182 RTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKG 361
RTDP DVARVESKT I T +R T+P +G+LGNWMS +D + A+++RFPGCM+G
Sbjct: 96 RTDPKDVARVESKTVIVTPSQRDTVP-LPPGGARGQLGNWMSPADFQRAVDERFPGCMQG 154
Query: 362 RTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHS 541
RTMYV+PFSMGP+G PLS+IG++LTDS YVV SM+IMTR+G VL+++ D FVK LHS
Sbjct: 155 RTMYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FVKCLHS 213
Query: 542 VGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILA 721
VG PL + ++ WPCNPEKTLI H+P + EI SFGSGYGGNSLLGKKCFALR+ S LA
Sbjct: 214 VGQPLTGQGEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLGKKCFALRIASRLA 273
Query: 722 RDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIP 859
RDE W AEHMLILG+T P G+K AAFPSACGKTNLAM+ P +P
Sbjct: 274 RDEGWLAEHMLILGITSPAGKKALCAAAFPSACGKTNLAMMRPALP 319
>sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 619
Score = 336 bits (861), Expect = 6e-92
Identities = 162/286 (56%), Positives = 215/286 (75%)
Frame = +2
Query: 2 EVNTLPKNVRDYIIEKANICIPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLV 181
+ + LP V+ ++ EKA + P I +CDGS+ E +I+ L+++G + L YEN ++
Sbjct: 13 DFHLLPPKVQRFVAEKAELMRPRGIYICDGSQHEADEIIDKLIERGMLSPLKAYENNYIC 72
Query: 182 RTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKG 361
RTDP DVARVESKT++ T K T+ T D I+ +G+WMS + L+ RFPGCM G
Sbjct: 73 RTDPKDVARVESKTWMVTPDKYQTVCHTPDG-IEPIMGHWMSPDSLATELDSRFPGCMAG 131
Query: 362 RTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHS 541
R MYVIPFSMGP+GGPLSKIG++LTDS YVV SM+IMTR+GH+V +++ D+ FV+ +HS
Sbjct: 132 RIMYVIPFSMGPVGGPLSKIGVQLTDSNYVVLSMRIMTRVGHEVWDALGDND-FVRCIHS 190
Query: 542 VGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILA 721
VG+P P ++ +IN WPCNPE+ LIAH PA+ EI SFGSGYGGNSLLGKK ALR+ S +A
Sbjct: 191 VGLPRPVKQRVINHWPCNPERVLIAHRPAEREIWSFGSGYGGNSLLGKKMLALRIASNIA 250
Query: 722 RDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIP 859
+DE W AEHMLI+G+T P+G++ +I AAFPSACGKTNLAM+EP +P
Sbjct: 251 KDEGWMAEHMLIMGVTRPDGKEHFIAAAFPSACGKTNLAMLEPALP 296
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,717,982
Number of Sequences: 369166
Number of extensions: 2328186
Number of successful extensions: 6114
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5980
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8534739105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)