Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_F09
(569 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammon... 247 2e-65
sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammon... 241 1e-63
sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammon... 239 3e-63
sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammon... 239 3e-63
sp|P15103|GLNA_BOVIN Glutamine synthetase (Glutamate--ammon... 239 3e-63
sp|P41320|GLNA_SQUAC Glutamine synthetase, mitochondrial pr... 239 4e-63
sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammon... 238 6e-63
sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammon... 238 6e-63
sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammon... 238 8e-63
sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (... 237 2e-62
>sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammonia ligase)
Length = 392
Score = 247 bits (630), Expect = 2e-65
Identities = 110/157 (70%), Positives = 134/157 (85%)
Frame = +1
Query: 1 GPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGG 180
GPCEGI++ DHLWMAR++LHRV EDFGVV + DPKP+ G+WNGAG HTNYST MR GG
Sbjct: 207 GPCEGIDMGDHLWMARFILHRVCEDFGVVATLDPKPMTGNWNGAGCHTNYSTESMRVEGG 266
Query: 181 IKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVANRGASIRIP 360
+K+IE+AIEK+ KRH HI YDP G+DN RRLTG+HETS+I +FS+GVANRGASIRIP
Sbjct: 267 LKHIEDAIEKLGKRHDYHICVYDPRGGKDNSRRLTGQHETSSIHEFSAGVANRGASIRIP 326
Query: 361 RQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 471
RQV ++G+GY EDRRP++NCDPY+VTE +VRTTIL +
Sbjct: 327 RQVGQEGYGYFEDRRPAANCDPYAVTEALVRTTILNE 363
>sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 241 bits (614), Expect = 1e-63
Identities = 110/157 (70%), Positives = 129/157 (82%)
Frame = +1
Query: 1 GPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGG 180
GPCEGI + DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G
Sbjct: 207 GPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENG 266
Query: 181 IKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVANRGASIRIP 360
+KYIEEAI+K+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVANRGASIRIP
Sbjct: 267 LKYIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRGASIRIP 326
Query: 361 RQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 471
R V ++ GY EDRRPS+NCDPY+VTE IVRT +L +
Sbjct: 327 RTVGQEKRGYFEDRRPSANCDPYAVTEAIVRTCLLNE 363
>sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 239 bits (611), Expect = 3e-63
Identities = 110/157 (70%), Positives = 129/157 (82%)
Frame = +1
Query: 1 GPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGG 180
GPCEGI + DHLW+AR++LHRV EDFGV+VSFDPKPI G+WNGAG HTN+ST MR GG
Sbjct: 207 GPCEGIEMGDHLWIARFILHRVCEDFGVIVSFDPKPIPGNWNGAGCHTNFSTKNMREDGG 266
Query: 181 IKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVANRGASIRIP 360
+K+IEEAIEK+SKRH HI AYDP G DN RRLTG HETS+I +FS+GVANRGASIRIP
Sbjct: 267 LKHIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSSIHEFSAGVANRGASIRIP 326
Query: 361 RQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 471
R V + GY EDR PS+NCDPY+VTE +VRT +L +
Sbjct: 327 RNVGHEKKGYFEDRGPSANCDPYAVTEALVRTCLLNE 363
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 239 bits (611), Expect = 3e-63
Identities = 108/157 (68%), Positives = 130/157 (82%)
Frame = +1
Query: 1 GPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGG 180
GPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G
Sbjct: 207 GPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENG 266
Query: 181 IKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVANRGASIRIP 360
+KYIEE+IEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVANRGASIRIP
Sbjct: 267 LKYIEESIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRGASIRIP 326
Query: 361 RQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 471
R V ++ GY EDRRPS+NCDP+SVTE ++RT +L +
Sbjct: 327 RTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 363
>sp|P15103|GLNA_BOVIN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 172
Score = 239 bits (611), Expect = 3e-63
Identities = 108/157 (68%), Positives = 130/157 (82%)
Frame = +1
Query: 1 GPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGG 180
GPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G
Sbjct: 6 GPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENG 65
Query: 181 IKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVANRGASIRIP 360
+KYIEEAIEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVANRGASIRIP
Sbjct: 66 LKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRGASIRIP 125
Query: 361 RQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 471
R V ++ GY EDRRPS+NCDP++VTE ++RT +L +
Sbjct: 126 RTVGQEKKGYFEDRRPSANCDPFAVTEALIRTCLLNE 162
>sp|P41320|GLNA_SQUAC Glutamine synthetase, mitochondrial precursor (Glutamate--ammonia
ligase)
Length = 403
Score = 239 bits (610), Expect = 4e-63
Identities = 106/157 (67%), Positives = 129/157 (82%)
Frame = +1
Query: 1 GPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGG 180
GPCEGI + DHLW++R++LHRV EDFG++ SFDPKPI G+WNGAG HTN+ST MR GG
Sbjct: 236 GPCEGIQMGDHLWISRFILHRVCEDFGIIASFDPKPIPGNWNGAGCHTNFSTKAMRDDGG 295
Query: 181 IKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVANRGASIRIP 360
+KYIE++IEK+ KRH HI AYDP G DN R LTG HETS I++FS+GVANRGASIRIP
Sbjct: 296 LKYIEDSIEKLGKRHQYHIRAYDPKGGLDNARALTGHHETSNINEFSAGVANRGASIRIP 355
Query: 361 RQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 471
R V +D GY EDRRPS+NCDPY+VTE +VRT +L++
Sbjct: 356 RSVGQDKKGYFEDRRPSANCDPYAVTEALVRTCLLDE 392
>sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 238 bits (608), Expect = 6e-63
Identities = 108/157 (68%), Positives = 129/157 (82%)
Frame = +1
Query: 1 GPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGG 180
GPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G
Sbjct: 207 GPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENG 266
Query: 181 IKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVANRGASIRIP 360
+KYIEEAIEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVANR ASIRIP
Sbjct: 267 LKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIP 326
Query: 361 RQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 471
R V ++ GY EDRRPS+NCDP+SVTE ++RT +L +
Sbjct: 327 RTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 363
>sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 374
Score = 238 bits (608), Expect = 6e-63
Identities = 108/157 (68%), Positives = 129/157 (82%)
Frame = +1
Query: 1 GPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGG 180
GPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WNGAG HTN+ST MR G
Sbjct: 208 GPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENG 267
Query: 181 IKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVANRGASIRIP 360
+KYIEEAIEK+SKRH HI AYDP G DN RRLTG HETS I+DFS+GVANR ASIRIP
Sbjct: 268 LKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIP 327
Query: 361 RQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 471
R V ++ GY EDRRPS+NCDP+SVTE ++RT +L +
Sbjct: 328 RTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 364
>sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammonia ligase)
Length = 361
Score = 238 bits (607), Expect = 8e-63
Identities = 113/157 (71%), Positives = 129/157 (82%)
Frame = +1
Query: 1 GPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGG 180
GPCEGI + D LWMARYLLHRVAEDF VVV+ DPKPI GDWNGAG HTN+ST MR P G
Sbjct: 204 GPCEGITMGDDLWMARYLLHRVAEDFDVVVTLDPKPIPGDWNGAGMHTNFSTEAMRGPNG 263
Query: 181 IKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVANRGASIRIP 360
I IE AI+K+SK H +HI+AYDPH G+DN RRLTG +ETS+I DFS+GVANRGASIRIP
Sbjct: 264 ILEIESAIDKLSKVHEKHIKAYDPHAGKDNERRLTGHYETSSIHDFSAGVANRGASIRIP 323
Query: 361 RQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 471
R V+E+ GYLEDRRPSSN DPY V+ER+VRT L +
Sbjct: 324 RGVAEEKTGYLEDRRPSSNADPYVVSERLVRTICLNE 360
>sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (Glutamate--ammonia ligase 2)
Length = 369
Score = 237 bits (604), Expect = 2e-62
Identities = 107/157 (68%), Positives = 131/157 (83%)
Frame = +1
Query: 1 GPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWNGAGAHTNYSTIQMRSPGG 180
GPCEGI++ D LWMAR+LLHR++E+FG+V + DPKP+ GDWNGAGAHTN ST MR GG
Sbjct: 213 GPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMPGDWNGAGAHTNVSTKAMREDGG 272
Query: 181 IKYIEEAIEKMSKRHHEHIEAYDPHKGEDNRRRLTGRHETSTIDDFSSGVANRGASIRIP 360
I+ IE+A+ K+SK H HI AYDP +G+DN RRLTG+HETS+I+DFS+GVANRG SIRIP
Sbjct: 273 IRDIEKAVAKLSKCHERHIRAYDPKQGQDNARRLTGKHETSSINDFSAGVANRGCSIRIP 332
Query: 361 RQVSEDGFGYLEDRRPSSNCDPYSVTERIVRTTILED 471
R V++DG GY EDRRPSSNCDPYSV E I+RT L++
Sbjct: 333 RGVNDDGKGYFEDRRPSSNCDPYSVVEAILRTICLDE 369
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,247,327
Number of Sequences: 369166
Number of extensions: 1151574
Number of successful extensions: 3434
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3350
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4177115900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)