Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_E19
(863 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53634|CATC_HUMAN Dipeptidyl-peptidase I precursor (DPP-... 331 2e-90
sp|Q60HG6|CATC_MACFA Dipeptidyl-peptidase I precursor (DPP-... 323 5e-88
sp|P97821|CATC_MOUSE Dipeptidyl-peptidase I precursor (DPP-... 322 8e-88
sp|P80067|CATC_RAT Dipeptidyl-peptidase I precursor (DPP-I)... 316 6e-86
sp|O97578|CATC_CANFA Dipeptidyl-peptidase I precursor (DPP-... 314 2e-85
sp|Q26563|CATC_SCHMA Cathepsin C precursor 285 9e-77
sp|P80884|ANAN_ANACO Ananain precursor 131 3e-30
sp|Q90686|CATK_CHICK Cathepsin K precursor (JTAP-1) 122 2e-27
sp|O35186|CATK_RAT Cathepsin K precursor 120 4e-27
sp|P00786|CATH_RAT Cathepsin H precursor (Cathepsin B3) (Ca... 120 5e-27
>sp|P53634|CATC_HUMAN Dipeptidyl-peptidase I precursor (DPP-I) (DPPI) (Cathepsin C)
(Cathepsin J) (Dipeptidyl transferase) [Contains:
Dipeptidyl-peptidase I exclusion domain chain;
Dipeptidyl-peptidase I heavy chain; Dipeptidyl-peptidase
I light chain]
Length = 463
Score = 331 bits (848), Expect = 2e-90
Identities = 153/272 (56%), Positives = 194/272 (71%), Gaps = 1/272 (0%)
Frame = +2
Query: 50 YGSQKRIVDKINLENNGWTAKDYPEFHEKTLYEVINMAGGSRSKLERPKPAPITKSILDS 229
Y V IN WTA Y E+ TL ++I +GG K+ RPKPAP+T I
Sbjct: 168 YKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLTAEIQQK 227
Query: 230 VKLIPKSFDWRNVNGVNYVSPVRNQGGCGSCYSFASAGMLEARYRIRSNNTVRPILSPQD 409
+ +P S+DWRNV+G+N+VSPVRNQ CGSCYSFAS GMLEAR RI +NN+ PILSPQ+
Sbjct: 228 ILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQE 287
Query: 410 VVECSPYSQGCDGGFPYLIAGKFAEDFGMAQESCNPYKGMNGKCSTTKDCKRYFATNYKY 589
VV CS Y+QGC+GGFPYLIAGK+A+DFG+ +E+C PY G + C +DC RY+++ Y Y
Sbjct: 288 VVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHY 347
Query: 590 IGGYYGATNEPLMRMELVRNGPIAVGFEVYDDFMSYSGGVYHHNFGTRKLTTSKFGFNPF 769
+GG+YG NE LM++ELV +GP+AV FEVYDDF+ Y G+YHH T + FNPF
Sbjct: 348 VGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHH-------TGLRDPFNPF 400
Query: 770 ELTNHAVLVVGYG-ETSSGEKFWIVKNSWGNG 862
ELTNHAVL+VGYG +++SG +WIVKNSWG G
Sbjct: 401 ELTNHAVLLVGYGTDSASGMDYWIVKNSWGTG 432
>sp|Q60HG6|CATC_MACFA Dipeptidyl-peptidase I precursor (DPP-I) (DPPI) (Cathepsin C)
(Cathepsin J) (Dipeptidyl transferase) [Contains:
Dipeptidyl-peptidase I exclusion domain chain;
Dipeptidyl-peptidase I heavy chain; Dipeptidyl-peptidase
I light chain]
Length = 463
Score = 323 bits (827), Expect = 5e-88
Identities = 149/270 (55%), Positives = 190/270 (70%), Gaps = 1/270 (0%)
Frame = +2
Query: 50 YGSQKRIVDKINLENNGWTAKDYPEFHEKTLYEVINMAGGSRSKLERPKPAPITKSILDS 229
Y V IN WTA Y E+ TL ++I +GG K+ RPKP P+T I
Sbjct: 168 YKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIKRSGGHSRKIPRPKPTPLTAEIQQK 227
Query: 230 VKLIPKSFDWRNVNGVNYVSPVRNQGGCGSCYSFASAGMLEARYRIRSNNTVRPILSPQD 409
+ +P S+DWRNV+G+N+VSPVRNQ CGSCYSFAS GMLEAR RI +NN+ PILS Q+
Sbjct: 228 ILHLPTSWDWRNVHGINFVSPVRNQASCGSCYSFASVGMLEARIRILTNNSQTPILSSQE 287
Query: 410 VVECSPYSQGCDGGFPYLIAGKFAEDFGMAQESCNPYKGMNGKCSTTKDCKRYFATNYKY 589
VV CS Y+QGC+GGFPYL AGK+A+DFG+ +E+C PY G + C +DC RY+++ Y Y
Sbjct: 288 VVSCSQYAQGCEGGFPYLTAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHY 347
Query: 590 IGGYYGATNEPLMRMELVRNGPIAVGFEVYDDFMSYSGGVYHHNFGTRKLTTSKFGFNPF 769
+GG+YG NE LM++ELV +GP+AV FEVYDDF+ Y G+YHH T + FNPF
Sbjct: 348 VGGFYGGCNEALMKLELVYHGPLAVAFEVYDDFLHYQNGIYHH-------TGLRDPFNPF 400
Query: 770 ELTNHAVLVVGYG-ETSSGEKFWIVKNSWG 856
ELTNHAVL+VGYG +++SG +WIVKNSWG
Sbjct: 401 ELTNHAVLLVGYGTDSASGMDYWIVKNSWG 430
>sp|P97821|CATC_MOUSE Dipeptidyl-peptidase I precursor (DPP-I) (DPPI) (Cathepsin C)
(Cathepsin J) (Dipeptidyl transferase) [Contains:
Dipeptidyl-peptidase I exclusion domain chain;
Dipeptidyl-peptidase I heavy chain; Dipeptidyl-peptidase
I light chain]
Length = 462
Score = 322 bits (825), Expect = 8e-88
Identities = 150/271 (55%), Positives = 196/271 (72%), Gaps = 1/271 (0%)
Frame = +2
Query: 50 YGSQKRIVDKINLENNGWTAKDYPEFHEKTLYEVINMAGGSRSKLERPKPAPITKSILDS 229
Y V IN WTA Y E+ + +L ++I +G S+ ++ RPKPAP+T I
Sbjct: 168 YTHNHNFVKAINTVQKSWTATAYKEYEKMSLRDLIRRSGHSQ-RIPRPKPAPMTDEIQQQ 226
Query: 230 VKLIPKSFDWRNVNGVNYVSPVRNQGGCGSCYSFASAGMLEARYRIRSNNTVRPILSPQD 409
+ +P+S+DWRNV GVNYVSPVRNQ CGSCYSFAS GMLEAR RI +NN+ PILSPQ+
Sbjct: 227 ILNLPESWDWRNVQGVNYVSPVRNQESCGSCYSFASMGMLEARIRILTNNSQTPILSPQE 286
Query: 410 VVECSPYSQGCDGGFPYLIAGKFAEDFGMAQESCNPYKGMNGKCSTTKDCKRYFATNYKY 589
VV CSPY+QGCDGGFPYLIAGK+A+DFG+ +ESC PY + C ++C RY++++Y Y
Sbjct: 287 VVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEESCFPYTAKDSPCKpreNCLRYYSSDYYY 346
Query: 590 IGGYYGATNEPLMRMELVRNGPIAVGFEVYDDFMSYSGGVYHHNFGTRKLTTSKFGFNPF 769
+GG+YG NE LM++ELV++GP+AV FEV+DDF+ Y G+YHH T FNPF
Sbjct: 347 VGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHH-------TGLSDPFNPF 399
Query: 770 ELTNHAVLVVGYG-ETSSGEKFWIVKNSWGN 859
ELTNHAVL+VGYG + +G ++WI+KNSWG+
Sbjct: 400 ELTNHAVLLVGYGRDPVTGIEYWIIKNSWGS 430
>sp|P80067|CATC_RAT Dipeptidyl-peptidase I precursor (DPP-I) (DPPI) (Cathepsin C)
(Cathepsin J) (Dipeptidyl transferase) [Contains:
Dipeptidyl-peptidase I exclusion domain chain;
Dipeptidyl-peptidase I heavy chain; Dipeptidyl-peptidase
I light chain]
Length = 462
Score = 316 bits (809), Expect = 6e-86
Identities = 147/271 (54%), Positives = 192/271 (70%), Gaps = 1/271 (0%)
Frame = +2
Query: 50 YGSQKRIVDKINLENNGWTAKDYPEFHEKTLYEVINMAGGSRSKLERPKPAPITKSILDS 229
Y V IN WTA Y + + ++ ++I +G S ++ RPKPAPIT I
Sbjct: 168 YSHHHNFVKAINSVQKSWTATTYRRYEKLSIRDLIRRSGHS-GRILRPKPAPITDEIQQQ 226
Query: 230 VKLIPKSFDWRNVNGVNYVSPVRNQGGCGSCYSFASAGMLEARYRIRSNNTVRPILSPQD 409
+ +P+S+DWRNV G+N+VSPVRNQ CGSCYSFAS GMLEAR RI +NN+ PILSPQ+
Sbjct: 227 ILSLPESWDWRNVRGINFVSPVRNQESCGSCYSFASIGMLEARIRILTNNSQTPILSPQE 286
Query: 410 VVECSPYSQGCDGGFPYLIAGKFAEDFGMAQESCNPYKGMNGKCSTTKDCKRYFATNYKY 589
VV CSPY+QGCDGGFPYLIAGK+A+DFG+ +E+C PY + C ++C RY+++ Y Y
Sbjct: 287 VVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEENCFPYTATDAPCKPKENCLRYYSSEYYY 346
Query: 590 IGGYYGATNEPLMRMELVRNGPIAVGFEVYDDFMSYSGGVYHHNFGTRKLTTSKFGFNPF 769
+GG+YG NE LM++ELV++GP+AV FEV+DDF+ Y G+YHH T FNPF
Sbjct: 347 VGGFYGGCNEALMKLELVKHGPMAVAFEVHDDFLHYHSGIYHH-------TGLSDPFNPF 399
Query: 770 ELTNHAVLVVGYG-ETSSGEKFWIVKNSWGN 859
ELTNHAVL+VGYG + +G +WIVKNSWG+
Sbjct: 400 ELTNHAVLLVGYGKDPVTGLDYWIVKNSWGS 430
>sp|O97578|CATC_CANFA Dipeptidyl-peptidase I precursor (DPP-I) (DPPI) (Cathepsin C)
(Cathepsin J) (Dipeptidyl transferase) [Contains:
Dipeptidyl-peptidase I exclusion domain chain;
Dipeptidyl-peptidase I heavy chain 1;
Dipeptidyl-peptidase I heavy chain 2;
Dipeptidyl-peptidase I heavy chain 3;
Dipeptidyl-peptidase I heavy chain 4;
Dipeptidyl-peptidase I light chain]
Length = 435
Score = 314 bits (805), Expect = 2e-85
Identities = 149/271 (54%), Positives = 190/271 (70%), Gaps = 1/271 (0%)
Frame = +2
Query: 50 YGSQKRIVDKINLENNGWTAKDYPEFHEKTLYEVINMAGGSRSKLERPKPAPITKSILDS 229
Y V IN WTA Y E+ TL +++ GG K+ RPKP P+T I +
Sbjct: 143 YKYNYEFVKAINTIQKSWTATRYIEYETLTLRDMMTRVGGR--KIPRPKPTPLTAEIHEE 200
Query: 230 VKLIPKSFDWRNVNGVNYVSPVRNQGGCGSCYSFASAGMLEARYRIRSNNTVRPILSPQD 409
+ +P S+DWRNV G N+VSPVRNQ CGSCY+FAS MLEAR RI +NNT PILSPQ+
Sbjct: 201 ISRLPTSWDWRNVRGTNFVSPVRNQASCGSCYAFASTAMLEARIRILTNNTQTPILSPQE 260
Query: 410 VVECSPYSQGCDGGFPYLIAGKFAEDFGMAQESCNPYKGMNGKCSTTKDCKRYFATNYKY 589
+V CS Y+QGC+GGFPYLIAGK+A+DFG+ +E+C PY G + C DC RY+++ Y Y
Sbjct: 261 IVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYAGSDSPCK-PNDCFRYYSSEYYY 319
Query: 590 IGGYYGATNEPLMRMELVRNGPIAVGFEVYDDFMSYSGGVYHHNFGTRKLTTSKFGFNPF 769
+GG+YGA NE LM++ELVR+GP+AV FEVYDDF Y G+Y+H T + FNPF
Sbjct: 320 VGGFYGACNEALMKLELVRHGPMAVAFEVYDDFFHYQKGIYYH-------TGLRDPFNPF 372
Query: 770 ELTNHAVLVVGYG-ETSSGEKFWIVKNSWGN 859
ELTNHAVL+VGYG +++SG +WIVKNSWG+
Sbjct: 373 ELTNHAVLLVGYGTDSASGMDYWIVKNSWGS 403
>sp|Q26563|CATC_SCHMA Cathepsin C precursor
Length = 454
Score = 285 bits (730), Expect = 9e-77
Identities = 143/277 (51%), Positives = 185/277 (66%), Gaps = 8/277 (2%)
Frame = +2
Query: 50 YGSQKRIVDKINLENNGWTAKDYPEFHEKTLYEVINMAGGSRSKLERP----KPAPITKS 217
Y V KIN W + YPE + T+ E+ N AGG +S + RP + P +K
Sbjct: 152 YHINPSFVGKINAHQKSWRGEIYPELSKYTIDELRNRAGGVKSMVTRPSVLNRKTP-SKE 210
Query: 218 ILDSVKLIPKSFDWRNV--NGVNYVSPVRNQGGCGSCYSFASAGMLEARYRIRSNNTVRP 391
++ +P FDW + + V+P+RNQG CGSCY+ SA LEAR R+ SN + +P
Sbjct: 211 LISLTGNLPLEFDWTSPPDGSRSPVTPIRNQGICGSCYASPSAAALEARIRLVSNFSEQP 270
Query: 392 ILSPQDVVECSPYSQGCDGGFPYLIAGKFAEDFGMAQESCNPYKGMN-GKCSTTKDCKRY 568
ILSPQ VV+CSPYS+GC+GGFP+LIAGK+ EDFG+ Q+ PY G + GKC+ +K+C RY
Sbjct: 271 ILSPQTVVDCSPYSEGCNGGFPFLIAGKYGEDFGLPQKIVIPYTGEDTGKCTVSKNCTRY 330
Query: 569 FATNYKYIGGYYGATNEPLMRMELVRNGPIAVGFEVYDDFMSYSGGVYHHNFGTRKLTTS 748
+ T+Y YIGGYYGATNE LM++EL+ NGP VGFEVY+DF Y G+YHH + T
Sbjct: 331 YTTDYSYIGGYYGATNEKLMQLELISNGPFPVGFEVYEDFQFYKEGIYHHT----TVQTD 386
Query: 749 KFGFNPFELTNHAVLVVGYG-ETSSGEKFWIVKNSWG 856
+ FNPFELTNHAVL+VGYG + SGE +W VKNSWG
Sbjct: 387 HYNFNPFELTNHAVLLVGYGVDKLSGEPYWKVKNSWG 423
>sp|P80884|ANAN_ANACO Ananain precursor
Length = 345
Score = 131 bits (329), Expect = 3e-30
Identities = 84/264 (31%), Positives = 124/264 (46%)
Frame = +2
Query: 71 VDKINLENNGWTAKDYPEFHEKTLYEVINMAGGSRSKLERPKPAPITKSILDSVKLIPKS 250
++ N N +F + T E + G L + ++ +D + +P+S
Sbjct: 68 IETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPLNIKREPVVSFDDVD-ISSVPQS 126
Query: 251 FDWRNVNGVNYVSPVRNQGGCGSCYSFASAGMLEARYRIRSNNTVRPILSPQDVVECSPY 430
DWR+ V + V+NQG CGSC++FAS +E+ Y+I+ N V LS Q V++C+
Sbjct: 127 IDWRDSGAV---TSVKNQGRCGSCWAFASIATVESIYKIKRGNLVS--LSEQQVLDCA-V 180
Query: 431 SQGCDGGFPYLIAGKFAEDFGMAQESCNPYKGMNGKCSTTKDCKRYFATNYKYIGGYYGA 610
S GC GG+ + G+A + PYK G C T + T Y Y+
Sbjct: 181 SYGCKGGWINKAYSFIISNKGVASAAIYPYKAAKGTCKTNGVPNSAYITRYTYV-----Q 235
Query: 611 TNEPLMRMELVRNGPIAVGFEVYDDFMSYSGGVYHHNFGTRKLTTSKFGFNPFELTNHAV 790
N M V N PIA + +F Y GV+ GTR NHA+
Sbjct: 236 RNNERNMMYAVSNQPIAAALDASGNFQHYKRGVFTGPCGTR--------------LNHAI 281
Query: 791 LVVGYGETSSGEKFWIVKNSWGNG 862
+++GYG+ SSG+KFWIV+NSWG G
Sbjct: 282 VIIGYGQDSSGKKFWIVRNSWGAG 305
>sp|Q90686|CATK_CHICK Cathepsin K precursor (JTAP-1)
Length = 334
Score = 122 bits (305), Expect = 2e-27
Identities = 84/243 (34%), Positives = 116/243 (47%), Gaps = 1/243 (0%)
Frame = +2
Query: 131 EKTLYEVINMAGGSRSKLERPKPAPITKSILDSVKLIPKSFDWRNVNGVNYVSPVRNQGG 310
+ T EV+ G R RP+P T + D P + DWR YV+PV++QG
Sbjct: 85 DMTSEEVVRTMTGLRVPRSRPRPNG-TLYVPDWSSRAPAAVDWRRKG---YVTPVKDQGQ 140
Query: 311 CGSCYSFASAGMLEARYRIRSNNTVRPILSPQDVVECSPYSQGCDGGFPYLIAGKFAEDF 490
CGSC++F+S G LE + + R+ + LSPQ++V C + GC GG+ +
Sbjct: 141 CGSCWAFSSVGALEGQLKRRTGKLLS--LSPQNLVYCVSNNNGCGGGYMTNAFEYVRLNR 198
Query: 491 GMAQESCNPYKGMNGKCSTTKDCKRYFATNYKYIGGYYGATNEPLMRMELVRNGPIAVGF 670
G+ E PY G + C + K Y+ I NE ++ + R GP++VG
Sbjct: 199 GIDSEDAYPYIGQDESCMYSPTGKAAKCRGYREI----PEDNEKALKRAVARIGPVSVGI 254
Query: 671 EV-YDDFMSYSGGVYHHNFGTRKLTTSKFGFNPFELTNHAVLVVGYGETSSGEKFWIVKN 847
+ F YS GVY+ G NP E NHAVL VGYG G K WI+KN
Sbjct: 255 DASLPSFQFYSRGVYYDT-----------GCNP-ENINHAVLAVGYG-AQKGTKHWIIKN 301
Query: 848 SWG 856
SWG
Sbjct: 302 SWG 304
>sp|O35186|CATK_RAT Cathepsin K precursor
Length = 329
Score = 120 bits (302), Expect = 4e-27
Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 1/207 (0%)
Frame = +2
Query: 239 IPKSFDWRNVNGVNYVSPVRNQGGCGSCYSFASAGMLEARYRIRSNNTVRPILSPQDVVE 418
+P S D+R YV+PV+NQG CGSC++F+SAG LE + + ++ + LSPQ++V+
Sbjct: 115 VPDSIDYRKKG---YVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLL--ALSPQNLVD 169
Query: 419 CSPYSQGCDGGFPYLIAGKFAEDFGMAQESCNPYKGMNGKCSTTKDCKRYFATNYKYIGG 598
C + GC GG+ ++ G+ E PY G + C K Y+ I
Sbjct: 170 CVSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREI-- 227
Query: 599 YYGATNEPLMRMELVRNGPIAVGFEV-YDDFMSYSGGVYHHNFGTRKLTTSKFGFNPFEL 775
NE ++ + R GP++V + F YS GVY+ R +
Sbjct: 228 --PVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDR------------DN 273
Query: 776 TNHAVLVVGYGETSSGEKFWIVKNSWG 856
NHAVLVVGYG T G K+WI+KNSWG
Sbjct: 274 VNHAVLVVGYG-TQKGNKYWIIKNSWG 299
>sp|P00786|CATH_RAT Cathepsin H precursor (Cathepsin B3) (Cathepsin BA) [Contains:
Cathepsin H mini chain; Cathepsin H heavy chain;
Cathepsin H light chain]
Length = 333
Score = 120 bits (301), Expect = 5e-27
Identities = 83/226 (36%), Positives = 109/226 (48%), Gaps = 3/226 (1%)
Frame = +2
Query: 191 PKPAPITKS-ILDSVKLIPKSFDWRNVNGVNYVSPVRNQGGCGSCYSFASAGMLEARYRI 367
P+ TKS L P S DWR N VSPV+NQG CGSC++F++ G LE+ I
Sbjct: 97 PQNCSATKSNYLRGTGPYPSSMDWRKKG--NVVSPVKNQGACGSCWTFSTTGALESAVAI 154
Query: 368 RSNNTVRPILSPQDVVECSP--YSQGCDGGFPYLIAGKFAEDFGMAQESCNPYKGMNGKC 541
S + L+ Q +V+C+ + GC GG P + G+ E PY G NG+C
Sbjct: 155 ASGKMM--TLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQC 212
Query: 542 STTKDCKRYFATNYKYIGGYYGATNEPLMRMELVRNGPIAVGFEVYDDFMSYSGGVYHHN 721
+ F N I +E M + P++ FEV +DFM Y GVY N
Sbjct: 213 KFNPEKAVAFVKNVVNI----TLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSN 268
Query: 722 FGTRKLTTSKFGFNPFELTNHAVLVVGYGETSSGEKFWIVKNSWGN 859
+ T K NHAVL VGYGE +G +WIVKNSWG+
Sbjct: 269 --SCHKTPDK--------VNHAVLAVGYGE-QNGLLYWIVKNSWGS 303
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,957,824
Number of Sequences: 369166
Number of extensions: 2388231
Number of successful extensions: 6874
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6337
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)