Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_B21
(921 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 309 6e-84
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 309 6e-84
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 309 6e-84
sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precu... 308 2e-83
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 305 1e-82
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 303 6e-82
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 300 3e-81
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 300 3e-81
sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein) 298 1e-80
sp|P61277|CATK_MACMU Cathepsin K precursor >gi|47117667|sp|... 298 2e-80
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 309 bits (792), Expect = 6e-84
Identities = 158/287 (55%), Positives = 189/287 (65%), Gaps = 5/287 (1%)
Frame = +2
Query: 2 RLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEEFRAKYLSVPPSRKKISTVFMA 181
R +WE N+K I+ HN E GKH +T+ +N F DMTNEEFR + + VF
Sbjct: 49 RAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKVFRE 108
Query: 182 PKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLV 361
P + LP +VDWR +GYVTPVKNQ+QCGSCW+FSATG+LEGQ FRKTG L S SEQ LV
Sbjct: 109 PLFLD-LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLV 167
Query: 362 DXXXXXXXXXXXXXLMDNAFEYI-EKFGIESEDAYPYTAEDGTCLYDKSKVVGSCTGYVD 538
D M AF+Y+ E G++SE++YPY A D C Y V + TG+
Sbjct: 168 DCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTV 227
Query: 539 IPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTE 718
+ G E +L A ATVGPISVA+DA + SFQ YKSGIY EPDCSS LDHGVLVVGYG E
Sbjct: 228 VAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFE 287
Query: 719 ----DGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGIATMASYPLV 847
+ S YWLVKNSWG WG +GY+K++KD NN CGIAT ASYP V
Sbjct: 288 GANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAASYPNV 334
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 309 bits (792), Expect = 6e-84
Identities = 157/287 (54%), Positives = 191/287 (66%), Gaps = 5/287 (1%)
Frame = +2
Query: 2 RLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEEFRAKYLSVPPSRKKISTVFMA 181
R +WE N+K I+ HN E GKH +T+ +N F DMTNEEFR + K +F
Sbjct: 49 RAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKMFQE 108
Query: 182 PKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLV 361
P ++P +VDWR +GYVTPVKNQ QCGSCW+FSATG+LEGQ FRKTG L S SEQ LV
Sbjct: 109 PL-FAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLV 167
Query: 362 DXXXXXXXXXXXXXLMDNAFEYI-EKFGIESEDAYPYTAED-GTCLYDKSKVVGSCTGYV 535
D LMDNAF Y+ + G++SE++YPY D TC Y + TG+V
Sbjct: 168 DCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFV 227
Query: 536 DIPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGY-- 709
D+P E +L A AT+GPISVAIDA + SFQ YKSGIY +PDCSS LDHGVLVVGY
Sbjct: 228 DLP-QREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGF 286
Query: 710 -GTEDGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGIATMASYPLV 847
GT+ + +W+VKNSWG WG +GY+KM+KD NN CGIAT ASYP V
Sbjct: 287 EGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 333
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 309 bits (792), Expect = 6e-84
Identities = 161/287 (56%), Positives = 193/287 (67%), Gaps = 5/287 (1%)
Frame = +2
Query: 2 RLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEEFRAKYLSVPPSRKKISTVFMA 181
R +WE N++ IQ HN E GKH +T+ +N F DMTNEEFR + K +F
Sbjct: 49 RAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQE 108
Query: 182 PKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLV 361
P M ++P TVDWR +G VTPVKNQ QCGSCW+FSA+G LEGQ F KTG L S SEQ LV
Sbjct: 109 PL-MLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLV 167
Query: 362 DXXXXXXXXXXXXXLMDNAFEYI-EKFGIESEDAYPYTAEDGTCLYDKSKVVGSCTGYVD 538
D LMD AF+YI E G++SE++YPY A+DG+C Y V + TG+VD
Sbjct: 168 DCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGFVD 227
Query: 539 IPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTE 718
IP E +L A ATVGPISVA+DAS+ S Q Y SGIY EP+CSS LDHGVLVVGYG E
Sbjct: 228 IP-QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGYE 286
Query: 719 ----DGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGIATMASYPLV 847
+ YWLVKNSWG WG+DGYIK++KD NN CG+AT ASYP+V
Sbjct: 287 GTDSNKDKYWLVKNSWGKEWGMDGYIKIAKDRNNHCGLATAASYPIV 333
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
Length = 323
Score = 308 bits (788), Expect = 2e-83
Identities = 152/283 (53%), Positives = 191/283 (67%), Gaps = 1/283 (0%)
Frame = +2
Query: 2 RLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEEFRAKYLSVPPSRKKISTVFMA 181
R+I+E N KYI++ N + + G+ T+ L +N F DMT EEF A P R +VF
Sbjct: 41 RVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKGNIPRRSAPVSVFYP 100
Query: 182 PKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLV 361
K G VDWRT+G VTPVK+Q QCGSCW+FS TGSLEGQHF KTG+L S +EQQLV
Sbjct: 101 KKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLV 160
Query: 362 DXXXXXXXXXXXXXLMDNAFEYIE-KFGIESEDAYPYTAEDGTCLYDKSKVVGSCTGYVD 538
D M++AF+YI+ GI++E AYPY A DG+C +D + V +C+G+ +
Sbjct: 161 DCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSVAATCSGHTN 220
Query: 539 IPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTE 718
I GSET L A +GPISV IDA++ SFQ Y SG+Y EP CS + LDH VL VGYG+E
Sbjct: 221 IASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSE 280
Query: 719 DGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGIATMASYPLV 847
G ++WLVKNSW T WG GYIKMS++ NN CGIAT+ASYPLV
Sbjct: 281 GGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVASYPLV 323
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 305 bits (781), Expect = 1e-82
Identities = 156/287 (54%), Positives = 191/287 (66%), Gaps = 5/287 (1%)
Frame = +2
Query: 2 RLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEEFRAKYLSVPPSRKKISTVFMA 181
R +WE N+K I+ HN E GKH++T+ +N F DMT+EEFR + + VF
Sbjct: 49 RAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQE 108
Query: 182 PKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLV 361
P + P +VDWR +GYVTPVKNQ QCGSCW+FSATG+LEGQ FRKTG L S SEQ LV
Sbjct: 109 PL-FYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLV 167
Query: 362 DXXXXXXXXXXXXXLMDNAFEYI-EKFGIESEDAYPYTAEDGTCLYDKSKVVGSCTGYVD 538
D LMD AF+Y+ + G++SE++YPY A + +C Y+ V + TG+VD
Sbjct: 168 DCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVD 227
Query: 539 IPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTE 718
IP E +L A ATVGPISVAIDA + SF YK GIY EPDCSS +DHGVLVVGYG E
Sbjct: 228 IP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFE 286
Query: 719 ----DGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGIATMASYPLV 847
D + YWLVKNSWG WG+ GY+KM+KD N CGIA+ ASYP V
Sbjct: 287 STESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 333
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 303 bits (775), Expect = 6e-82
Identities = 157/287 (54%), Positives = 195/287 (67%), Gaps = 5/287 (1%)
Frame = +2
Query: 2 RLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEEFRAKYLSVPPSRKKISTVFMA 181
R IWE N++ IQ HN E G+H +++ +N F DMTNEEFR + K +F
Sbjct: 49 RAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQE 108
Query: 182 PKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLV 361
P M K+P +VDWR +G VTPVKNQ QCGSCW+FSA+G LEGQ F KTG L S SEQ LV
Sbjct: 109 PL-MLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLV 167
Query: 362 DXXXXXXXXXXXXXLMDNAFEYI-EKFGIESEDAYPYTAEDGTCLYDKSKVVGSCTGYVD 538
D LMD AF+YI E G++SE++YPY A+DG+C Y V + TG+VD
Sbjct: 168 DCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGFVD 227
Query: 539 IPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGTE 718
IP E +L A ATVGPISVA+DAS+ S Q Y SGIY EP+CSS LDHGVL+VGYG E
Sbjct: 228 IP-QQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYE 286
Query: 719 ----DGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGIATMASYPLV 847
+ + YWLVKNSWG+ WG++GYIK++KD +N CG+AT ASYP+V
Sbjct: 287 GTDSNKNKYWLVKNSWGSEWGMEGYIKIAKDRDNHCGLATAASYPVV 333
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 300 bits (769), Expect = 3e-81
Identities = 155/288 (53%), Positives = 191/288 (66%), Gaps = 6/288 (2%)
Frame = +2
Query: 2 RLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEEFRAKYLSVPPSRKKISTVFMA 181
R +WE N+K I+ HN E GKH +++ +N F DMTNEEFR + K VF
Sbjct: 49 RAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHE 108
Query: 182 PKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLV 361
+ ++P +VDWR +GYVT VKNQ QCGSCW+FSATG+LEGQ FRKTG L S SEQ LV
Sbjct: 109 SLVL-EVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLV 167
Query: 362 DXXXXXXXXXXXXXLMDNAFEYI-EKFGIESEDAYPYTA-EDGTCLYDKSKVVGSCTGYV 535
D LMDNAF+Y+ + G+++E++YPY E +C Y + TG+V
Sbjct: 168 DCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFV 227
Query: 536 DIPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGT 715
DIP E +L A ATVGPISVAIDA + SFQ YKSGIY +PDCSS LDHGVLVVGYG
Sbjct: 228 DIP-QREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGF 286
Query: 716 E----DGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGIATMASYPLV 847
E + S +W+VKNSWG WG +GY+KM+KD NN CGI+T ASYP V
Sbjct: 287 EGTDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAASYPTV 334
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 300 bits (769), Expect = 3e-81
Identities = 157/288 (54%), Positives = 188/288 (65%), Gaps = 6/288 (2%)
Frame = +2
Query: 2 RLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEEFRAKYLSVPPSRKKISTVFMA 181
R +WE N K I HN E GKH + + +N F DMTNEEFR + K +F
Sbjct: 49 RAVWEKNKKIIDLHNQEYSEGKHAFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHE 108
Query: 182 PKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQLV 361
P + +P +VDW +GYVTPVKNQ QCGSCW+FSATG+LEGQ FRKTG L S SEQ LV
Sbjct: 109 PL-LVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLV 167
Query: 362 DXXXXXXXXXXXXXLMDNAFEYI-EKFGIESEDAYPYTAED-GTCLYDKSKVVGSCTGYV 535
D LMDNAF+YI + G++SE++YPY A D +C Y + TG+V
Sbjct: 168 DCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFV 227
Query: 536 DIPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYGT 715
DIP E +L A ATVGPISVAIDA + SFQ YKSGIY +PDCS LDHGVLVVGYG
Sbjct: 228 DIP-QREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGYGF 286
Query: 716 E----DGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGIATMASYPLV 847
E + + +W+VKNSWG WG +GY+KM+KD NN CGIAT ASYP V
Sbjct: 287 EGTDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAASYPTV 334
>sp|P43236|CATK_RABIT Cathepsin K precursor (OC-2 protein)
Length = 329
Score = 298 bits (764), Expect = 1e-80
Identities = 144/283 (50%), Positives = 189/283 (66%), Gaps = 3/283 (1%)
Frame = +2
Query: 2 RLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEEFRAKY--LSVPPSRKKISTVF 175
RLIWE NLK+I HN+E+ LG HTY L +NH DMT+EE K L VPPSR +
Sbjct: 47 RLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSHSNDTL 106
Query: 176 MAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQ 355
P G+ PD++D+R +GYVTPVKNQ QCGSCW+FS+ G+LEGQ +KTG L + S Q
Sbjct: 107 YIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQN 166
Query: 356 LVDXXXXXXXXXXXXXLMDNAFEYIEKF-GIESEDAYPYTAEDGTCLYDKSKVVGSCTGY 532
LVD M NAF+Y+++ GI+SEDAYPY +D +C+Y+ + C GY
Sbjct: 167 LVDCVSENYGCGGGY--MTNAFQYVQRNRGIDSEDAYPYVGQDESCMYNPTGKAAKCRGY 224
Query: 533 VDIPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYG 712
+IP G+E +L A A VGP+SVAIDAS SFQ Y G+Y + +CSS ++H VL VGYG
Sbjct: 225 REIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAVGYG 284
Query: 713 TEDGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGIATMASYP 841
+ G+ +W++KNSWG WG GYI M+++ NN CGIA +AS+P
Sbjct: 285 IQKGNKHWIIKNSWGESWGNKGYILMARNKNNACGIANLASFP 327
>sp|P61277|CATK_MACMU Cathepsin K precursor
sp|P61276|CATK_MACFA Cathepsin K precursor
Length = 329
Score = 298 bits (762), Expect = 2e-80
Identities = 145/283 (51%), Positives = 187/283 (66%), Gaps = 3/283 (1%)
Frame = +2
Query: 2 RLIWESNLKYIQKHNIESDLGKHTYTLGLNHFADMTNEEFRAKY--LSVPPSRKKISTVF 175
RLIWE NLKYI HN+E+ LG HTY L +NH DMTNEE K L VP S + +
Sbjct: 47 RLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTL 106
Query: 176 MAPKNMGKLPDTVDWRTEGYVTPVKNQEQCGSCWSFSATGSLEGQHFRKTGNLTSFSEQQ 355
P G+ PD+VD+R +GYVTPVKNQ QCGSCW+FS+ G+LEGQ +KTG L + S Q
Sbjct: 107 YIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQN 166
Query: 356 LVDXXXXXXXXXXXXXLMDNAFEYIEKF-GIESEDAYPYTAEDGTCLYDKSKVVGSCTGY 532
LVD M NAF+Y++K GI+SEDAYPY ++ +C+Y+ + C GY
Sbjct: 167 LVDCVSENDGCGGGY--MTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGY 224
Query: 533 VDIPGGSETSLATAAATVGPISVAIDASNYSFQLYKSGIYNEPDCSSTQLDHGVLVVGYG 712
+IP G+E +L A A VGP+SVAIDAS SFQ Y G+Y + C+S L+H VL VGYG
Sbjct: 225 REIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYG 284
Query: 713 TEDGSNYWLVKNSWGTVWGIDGYIKMSKDANNQCGIATMASYP 841
+ G+ +W++KNSWG WG GYI M+++ NN CGIA +AS+P
Sbjct: 285 IQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,633,740
Number of Sequences: 369166
Number of extensions: 2224223
Number of successful extensions: 7140
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6586
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9414689480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)