Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_A24
(649 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P42577|FRIS_LYMST Soma ferritin 69 8e-12
sp|P07797|FRI3_RANCA Ferritin, lower subunit (Ferritin L) 66 7e-11
sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (... 66 9e-11
sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M) 66 9e-11
sp|P25915|FRIH_RABIT Ferritin heavy chain (Ferritin H subunit) 64 3e-10
sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit) 64 3e-10
sp|P17663|FRIH1_XENLA Ferritin heavy chain 1 64 4e-10
sp|Q9XT73|FRIH_TRIVU Ferritin heavy chain (Ferritin H subunit) 63 6e-10
sp|P29389|FRIH_CRIGR Ferritin heavy chain (Ferritin H subunit) 62 1e-09
sp|P02794|FRIH_HUMAN Ferritin heavy chain (Ferritin H subun... 62 1e-09
>sp|P42577|FRIS_LYMST Soma ferritin
Length = 174
Score = 69.3 bits (168), Expect = 8e-12
Identities = 39/139 (28%), Positives = 69/139 (49%)
Frame = +1
Query: 4 GVSTLINRMLHLCQGYRQIQMRFLTIDLNLMSFGRLFELIRQMEVNHVDELIRFQISRGQ 183
G++ IN L+ Y+ + F D+ L F + F+ + E H ++L+++Q RG
Sbjct: 17 GINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGG 76
Query: 184 RITWFDVKPVEHIDTSQPIEVLQTISNLEKDIHQMTLRLSKLAWEKNDLSLTAFFDERII 363
RI D+K + + +E +Q LEK ++Q L L KL +D + F + +
Sbjct: 77 RIVLQDIKKPDRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFL 136
Query: 364 LRQIKVIRKRSKQLRDLKR 420
Q+K I++ S + +LKR
Sbjct: 137 EEQVKSIKELSDYITNLKR 155
>sp|P07797|FRI3_RANCA Ferritin, lower subunit (Ferritin L)
Length = 173
Score = 66.2 bits (160), Expect = 7e-11
Identities = 38/139 (27%), Positives = 67/139 (48%)
Frame = +1
Query: 4 GVSTLINRMLHLCQGYRQIQMRFLTIDLNLMSFGRLFELIRQMEVNHVDELIRFQISRGQ 183
G++ +N H Y + F D+ L +F + F + E H ++LI +Q RG
Sbjct: 16 GLNRTVNLKFHSSYVYLSMASYFNRDDVALSNFAKFFRERSEEEKEHAEKLIEYQNQRGG 75
Query: 184 RITWFDVKPVEHIDTSQPIEVLQTISNLEKDIHQMTLRLSKLAWEKNDLSLTAFFDERII 363
R+ V+ E D + +E LQT L+K ++Q L L +A +K+D +T F + +
Sbjct: 76 RVFLQSVEKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAADKSDPHMTDFLESPYL 135
Query: 364 LRQIKVIRKRSKQLRDLKR 420
++ I+K + LK+
Sbjct: 136 SESVETIKKLGDHITSLKK 154
>sp|Q7SXA5|FRIL_XENLA Ferritin light chain, oocyte isoform (B-ferritin) (XeBF) (GV-LCH)
Length = 177
Score = 65.9 bits (159), Expect = 9e-11
Identities = 36/139 (25%), Positives = 68/139 (48%)
Frame = +1
Query: 4 GVSTLINRMLHLCQGYRQIQMRFLTIDLNLMSFGRLFELIRQMEVNHVDELIRFQISRGQ 183
GV+ + N L Y + F D+ L F + F + + + +H ++ ++FQ RG
Sbjct: 18 GVNRIANLELQASYLYLSVGYYFDRDDVALSKFSKFFRELSEKKRDHAEDFLKFQNKRGG 77
Query: 184 RITWFDVKPVEHIDTSQPIEVLQTISNLEKDIHQMTLRLSKLAWEKNDLSLTAFFDERII 363
R+ DVK + + + ++ NLEK I+Q L L K+A + D + + + +
Sbjct: 78 RVVLQDVKKPDDDEWGNGTKAMEVALNLEKSINQAVLDLHKIATDHTDPHMQDYLEHEFL 137
Query: 364 LRQIKVIRKRSKQLRDLKR 420
++K+I+K L +L+R
Sbjct: 138 EEEVKLIKKLGDHLTNLRR 156
>sp|P49947|FRIM_SALSA Ferritin, middle subunit (Ferritin M)
Length = 176
Score = 65.9 bits (159), Expect = 9e-11
Identities = 39/138 (28%), Positives = 66/138 (47%)
Frame = +1
Query: 7 VSTLINRMLHLCQGYRQIQMRFLTIDLNLMSFGRLFELIRQMEVNHVDELIRFQISRGQR 186
++ +IN + Y + F D+ L F F+ + E H D+L+ FQ RG R
Sbjct: 17 INRMINMEMFASYTYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLSFQNKRGGR 76
Query: 187 ITWFDVKPVEHIDTSQPIEVLQTISNLEKDIHQMTLRLSKLAWEKNDLSLTAFFDERIIL 366
I D+K E + +E +Q LEK+++Q L L K+A +K D L F + +
Sbjct: 77 ILLQDIKKPERDEWGNGLEAMQCALQLEKNVNQALLDLHKIASDKVDPHLCDFLETHYLN 136
Query: 367 RQIKVIRKRSKQLRDLKR 420
Q++ I+K + +L +
Sbjct: 137 EQVEAIKKLGDHITNLTK 154
>sp|P25915|FRIH_RABIT Ferritin heavy chain (Ferritin H subunit)
Length = 164
Score = 64.3 bits (155), Expect = 3e-10
Identities = 39/138 (28%), Positives = 68/138 (49%)
Frame = +1
Query: 7 VSTLINRMLHLCQGYRQIQMRFLTIDLNLMSFGRLFELIRQMEVNHVDELIRFQISRGQR 186
++ IN L+ Y + F D+ L +F + F E H ++L++ Q RG R
Sbjct: 2 INRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 61
Query: 187 ITWFDVKPVEHIDTSQPIEVLQTISNLEKDIHQMTLRLSKLAWEKNDLSLTAFFDERIIL 366
I D+K E+ D + ++ +LEK ++Q L L KLA +KND L F + +
Sbjct: 62 IFLQDIKKPEYDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLN 121
Query: 367 RQIKVIRKRSKQLRDLKR 420
Q+K I++ + +L++
Sbjct: 122 EQVKSIKELGDHVTNLRK 139
>sp|P08267|FRIH_CHICK Ferritin heavy chain (Ferritin H subunit)
Length = 180
Score = 63.9 bits (154), Expect = 3e-10
Identities = 39/138 (28%), Positives = 68/138 (49%)
Frame = +1
Query: 7 VSTLINRMLHLCQGYRQIQMRFLTIDLNLMSFGRLFELIRQMEVNHVDELIRFQISRGQR 186
++ IN L+ Y + F D+ L +F + F E H ++L++ Q RG R
Sbjct: 20 INRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 79
Query: 187 ITWFDVKPVEHIDTSQPIEVLQTISNLEKDIHQMTLRLSKLAWEKNDLSLTAFFDERIIL 366
I D+K + D + ++ +LEK+++Q L L KLA EKND L F + +
Sbjct: 80 IFLQDIKKPDRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKNDPHLCDFIETHYLD 139
Query: 367 RQIKVIRKRSKQLRDLKR 420
Q+K I++ + +L++
Sbjct: 140 EQVKAIKQLGDHVTNLRK 157
>sp|P17663|FRIH1_XENLA Ferritin heavy chain 1
Length = 176
Score = 63.5 bits (153), Expect = 4e-10
Identities = 36/138 (26%), Positives = 67/138 (48%)
Frame = +1
Query: 7 VSTLINRMLHLCQGYRQIQMRFLTIDLNLMSFGRLFELIRQMEVNHVDELIRFQISRGQR 186
++ ++N ++ Y + F D+ L + F+ E H ++ +++Q RG R
Sbjct: 17 INRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGR 76
Query: 187 ITWFDVKPVEHIDTSQPIEVLQTISNLEKDIHQMTLRLSKLAWEKNDLSLTAFFDERIIL 366
+ D+K E + S +E +Q LEK ++Q L L KLA +K D L F + +
Sbjct: 77 VVLQDIKKPERDEWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLESEYLE 136
Query: 367 RQIKVIRKRSKQLRDLKR 420
Q+K +++ + +LKR
Sbjct: 137 EQVKAMKELGDYITNLKR 154
>sp|Q9XT73|FRIH_TRIVU Ferritin heavy chain (Ferritin H subunit)
Length = 183
Score = 63.2 bits (152), Expect = 6e-10
Identities = 38/138 (27%), Positives = 68/138 (49%)
Frame = +1
Query: 7 VSTLINRMLHLCQGYRQIQMRFLTIDLNLMSFGRLFELIRQMEVNHVDELIRFQISRGQR 186
++ IN L+ Y + F D+ L +F + F E H ++L++ Q RG R
Sbjct: 21 INRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 80
Query: 187 ITWFDVKPVEHIDTSQPIEVLQTISNLEKDIHQMTLRLSKLAWEKNDLSLTAFFDERIIL 366
I D+K + D + ++ +LEK+++Q L L KLA +KND L F + +
Sbjct: 81 IFLQDIKKPDRDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLD 140
Query: 367 RQIKVIRKRSKQLRDLKR 420
Q+K I++ + +L++
Sbjct: 141 EQVKAIKQLGDHVTNLRK 158
>sp|P29389|FRIH_CRIGR Ferritin heavy chain (Ferritin H subunit)
Length = 186
Score = 62.4 bits (150), Expect = 1e-09
Identities = 38/138 (27%), Positives = 67/138 (48%)
Frame = +1
Query: 7 VSTLINRMLHLCQGYRQIQMRFLTIDLNLMSFGRLFELIRQMEVNHVDELIRFQISRGQR 186
++ IN L+ Y + F D+ L +F + F E H ++L++ Q RG R
Sbjct: 26 INRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 85
Query: 187 ITWFDVKPVEHIDTSQPIEVLQTISNLEKDIHQMTLRLSKLAWEKNDLSLTAFFDERIIL 366
I D+K + D + ++ +LEK ++Q L L KLA +KND L F + +
Sbjct: 86 IFLQDIKKPDRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLN 145
Query: 367 RQIKVIRKRSKQLRDLKR 420
Q+K I++ + +L++
Sbjct: 146 EQVKSIKELGDHVTNLRK 163
>sp|P02794|FRIH_HUMAN Ferritin heavy chain (Ferritin H subunit) (Proliferation-inducing
gene 15 protein)
Length = 183
Score = 62.4 bits (150), Expect = 1e-09
Identities = 38/138 (27%), Positives = 68/138 (49%)
Frame = +1
Query: 7 VSTLINRMLHLCQGYRQIQMRFLTIDLNLMSFGRLFELIRQMEVNHVDELIRFQISRGQR 186
++ IN L+ Y + F D+ L +F + F E H ++L++ Q RG R
Sbjct: 21 INRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGR 80
Query: 187 ITWFDVKPVEHIDTSQPIEVLQTISNLEKDIHQMTLRLSKLAWEKNDLSLTAFFDERIIL 366
I D+K + D + ++ +LEK+++Q L L KLA +KND L F + +
Sbjct: 81 IFLQDIKKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLN 140
Query: 367 RQIKVIRKRSKQLRDLKR 420
Q+K I++ + +L++
Sbjct: 141 EQVKAIKELGDHVTNLRK 158
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,049,925
Number of Sequences: 369166
Number of extensions: 1164324
Number of successful extensions: 2996
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2996
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5316264630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)