Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_009_A21
(870 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7TMR0|PCP_MOUSE Lysosomal Pro-X carboxypeptidase precur... 246 8e-65
sp|Q5RBU7|PCP_PONPY Lysosomal Pro-X carboxypeptidase precur... 241 2e-63
sp|P42785|PCP_HUMAN Lysosomal Pro-X carboxypeptidase precur... 239 7e-63
sp|Q9ET22|DPP2_MOUSE Dipeptidyl-peptidase II precursor (DPP... 195 1e-49
sp|Q9UHL4|DPP2_HUMAN Dipeptidyl-peptidase II precursor (DPP... 194 2e-49
sp|Q9EPB1|DPP2_RAT Dipeptidyl-peptidase II precursor (DPP I... 194 3e-49
sp|P34676|YO26_CAEEL Putative serine protease Z688.6 precursor 175 2e-43
sp|P34610|PCP1_CAEEL Putative serine protease pcp-1 precursor 137 3e-32
sp|P34528|YM67_CAEEL Putative serine protease K12H4.7 precu... 76 1e-13
sp|P90893|YM9I_CAEEL Putative serine protease F56F10.1 prec... 68 3e-11
>sp|Q7TMR0|PCP_MOUSE Lysosomal Pro-X carboxypeptidase precursor (Prolylcarboxypeptidase)
(PRCP) (Proline carboxypeptidase)
Length = 491
Score = 246 bits (627), Expect = 8e-65
Identities = 124/293 (42%), Positives = 174/293 (59%), Gaps = 4/293 (1%)
Frame = +2
Query: 2 ASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCSYPFQVLTKAYQ 181
A PVIA GGSYGGMLAAWFR KYP+IV G+LAASAP+ + + C +++T ++
Sbjct: 166 AQGQPVIAIGGSYGGMLAAWFRMKYPHIVVGALAASAPIWQLDGMVPCGEFMKIVTNDFR 225
Query: 182 TKGSDACVSNVRNVWPVIQQMNDS-LHLVNLSRIFHTCQPL--KNVDDLIAVLTDGLFDM 352
G C ++R W VI +++ S L +L+ I H C PL + + L + + ++
Sbjct: 226 KSGP-YCSESIRKSWNVIDKLSGSGSGLQSLTNILHLCSPLTSEKIPTLKGWIAETWVNL 284
Query: 353 GMANYPYPANFLGPMPAWPVKEFCKPLSNIIKDPIELLNAFFTGLQVFYNYTGQIQCLST 532
M NYPY NFL P+PAWP+KE C+ L N LL F L V+YNY+GQ CL+
Sbjct: 285 AMVNYPYACNFLQPLPAWPIKEVCQYLKNPNVSDTVLLQNIFQALSVYYNYSGQAACLNI 344
Query: 533 T-TNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNNDRSCQKSFGVTPRWGW 709
+ T L GW+ Q CTE+ MP CT+G+ DMF ++ + C +GV PR W
Sbjct: 345 SQTTTSSLGSMGWSFQACTEMVMPFCTNGIDDMFEPFLWDLEKYSNDCFNQWGVKPRPHW 404
Query: 710 GQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIEIVTMKNGAHHVDL 868
T++ GKN+++ SNIIFSNG LDPW+ GGV ++ + + +GAHH+DL
Sbjct: 405 MTTMYGGKNISSHSNIIFSNGELDPWSGGGVTRDITDTLVAINIHDGAHHLDL 457
>sp|Q5RBU7|PCP_PONPY Lysosomal Pro-X carboxypeptidase precursor (Prolylcarboxypeptidase)
(PRCP) (Proline carboxypeptidase)
Length = 496
Score = 241 bits (615), Expect = 2e-63
Identities = 122/293 (41%), Positives = 177/293 (60%), Gaps = 4/293 (1%)
Frame = +2
Query: 2 ASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCSYPFQVLTKAYQ 181
A + PVIA GGSYGGMLAAWFR KYP++V G+LAASAP+ ++ C +++T ++
Sbjct: 168 AENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFR 227
Query: 182 TKGSDACVSNVRNVWPVIQQM-NDSLHLVNLSRIFHTCQPL--KNVDDLIAVLTDGLFDM 352
G C ++R W I ++ N L L+ H C PL +++ L +++ ++
Sbjct: 228 KSGPH-CSESIRRSWDAINRLSNTGSGLQWLTGALHLCSPLTSQDIQHLKDWISETWVNL 286
Query: 353 GMANYPYPANFLGPMPAWPVKEFCKPLSNIIKDPIELLNAFFTGLQVFYNYTGQIQCLST 532
M +YPY +NFL P+PAWP+K C+ L N LL F L V+YNY+GQ++CL+
Sbjct: 287 AMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVYYNYSGQVKCLNI 346
Query: 533 T-TNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNNDRSCQKSFGVTPRWGW 709
+ T L GW+ Q CTE+ MP CT+GV DMF S+N + C + +GV PR W
Sbjct: 347 SETATSSLGTLGWSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQWGVRPRPSW 406
Query: 710 GQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIEIVTMKNGAHHVDL 868
T++ GKN+++ +NI+FSNG LDPW+ GGV ++ VT+ GAHH+DL
Sbjct: 407 ITTMYGGKNISSHTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHLDL 459
>sp|P42785|PCP_HUMAN Lysosomal Pro-X carboxypeptidase precursor (Prolylcarboxypeptidase)
(PRCP) (Proline carboxypeptidase) (Angiotensinase C)
(Lysosomal carboxypeptidase C)
Length = 496
Score = 239 bits (610), Expect = 7e-63
Identities = 121/293 (41%), Positives = 176/293 (60%), Gaps = 4/293 (1%)
Frame = +2
Query: 2 ASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCSYPFQVLTKAYQ 181
A + PVIA GGSYGGMLAAWFR KYP++V G+LAASAP+ ++ C +++T ++
Sbjct: 168 AENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFR 227
Query: 182 TKGSDACVSNVRNVWPVIQQM-NDSLHLVNLSRIFHTCQPL--KNVDDLIAVLTDGLFDM 352
G C ++ W I ++ N L L+ H C PL +++ L +++ ++
Sbjct: 228 KSGPH-CSESIHRSWDAINRLSNTGSGLQWLTGALHLCSPLTSQDIQHLKDWISETWVNL 286
Query: 353 GMANYPYPANFLGPMPAWPVKEFCKPLSNIIKDPIELLNAFFTGLQVFYNYTGQIQCLST 532
M +YPY +NFL P+PAWP+K C+ L N LL F L V+YNY+GQ++CL+
Sbjct: 287 AMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVYYNYSGQVKCLNI 346
Query: 533 T-TNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNNDRSCQKSFGVTPRWGW 709
+ T L GW+ Q CTE+ MP CT+GV DMF S+N + C + +GV PR W
Sbjct: 347 SETATSSLGTLGWSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQWGVRPRPSW 406
Query: 710 GQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIEIVTMKNGAHHVDL 868
T++ GKN+++ +NI+FSNG LDPW+ GGV ++ VT+ GAHH+DL
Sbjct: 407 ITTMYGGKNISSHTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHLDL 459
>sp|Q9ET22|DPP2_MOUSE Dipeptidyl-peptidase II precursor (DPP II) (Dipeptidyl aminopeptidase
II) (Quiescent cell proline dipeptidase) (Dipeptidyl
peptidase 7)
Length = 506
Score = 195 bits (496), Expect = 1e-49
Identities = 117/295 (39%), Positives = 169/295 (57%), Gaps = 9/295 (3%)
Frame = +2
Query: 11 SPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCSYPFQVLTKAYQTKG 190
+P IAFGGSYGGML+A+ R KYP++VAG+LAASAPV+ V + + F+ +T + +
Sbjct: 164 APTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVVAVAGLGDSYQFFRDVTADFYGQ- 222
Query: 191 SDACVSNVRNVWPVIQQMNDSLHLVNLSRIFHTCQPL---KNVDDLIAVLTDGLFDMGMA 361
S C VR+ + I+ + +S+ F TCQ L K++ L + + M
Sbjct: 223 SPKCAQAVRDAFQQIKDLFLQGAYDTISQNFGTCQSLSSPKDLTQLFGFARNAFTVLAMM 282
Query: 362 NYPYPANFLGPMPAWPVKEFCKPLSNIIKDPIEL-----LNAFFTGLQVFYN-YTGQIQC 523
+YPYP +FLGP+PA PVK C+ L N + + L L +G + Y+ Y C
Sbjct: 283 DYPYPTDFLGPLPANPVKVGCQRLLNEGQRIMGLRALAGLVYNSSGTEPCYDIYRLYQSC 342
Query: 524 LSTTTNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNNDRSCQKSFGVTPRW 703
T G D W+ Q CTE+ + ++ V DMF F+++ + C ++GV PR
Sbjct: 343 ADPTGCGTGSDARAWDYQACTEINLTFDSNNVTDMFPEIPFSEELRQQYCLDTWGVWPRQ 402
Query: 704 GWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIEIVTMKNGAHHVDL 868
W QT FWG +L AASNIIFSNG LDPWA GG+ ++ + S+ VT++ GAHH+DL
Sbjct: 403 DWLQTSFWGGDLKAASNIIFSNGDLDPWAGGGIQSNLSTSVIAVTIQGGAHHLDL 457
>sp|Q9UHL4|DPP2_HUMAN Dipeptidyl-peptidase II precursor (DPP II) (Dipeptidyl aminopeptidase
II) (Quiescent cell proline dipeptidase) (Dipeptidyl
peptidase 7)
Length = 492
Score = 194 bits (494), Expect = 2e-49
Identities = 119/306 (38%), Positives = 164/306 (53%), Gaps = 17/306 (5%)
Frame = +2
Query: 2 ASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCSYPFQVLTKAYQ 181
A +P IAFGGSYGGML+A+ R KYP++VAG+LAASAPVL V + + + F+ +T ++
Sbjct: 151 AQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTADFE 210
Query: 182 TKGSDACVSNVRNVWPVIQQMNDSLHLVNLSRIFHTCQPLKNVDDLIAVLT---DGLFDM 352
+ S C VR + I+ + + F TCQPL + DL + + +
Sbjct: 211 GQ-SPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGTCQPLSDEKDLTQLFMFARNAFTVL 269
Query: 353 GMANYPYPANFLGPMPAWPVKEFCKPLSNIIKDPIELLNAFFTGLQVF----YNYTGQIQ 520
M +YPYP +FLGP+PA PVK C L + + TGL+ YN +G
Sbjct: 270 AMMDYPYPTDFLGPLPANPVKVGCDRLLSEAQR--------ITGLRALAGLVYNASGSEH 321
Query: 521 CLST----------TTNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNNDRS 670
C T G D W+ Q CTE+ + ++ V DMF F + R
Sbjct: 322 CYDIYRLYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRY 381
Query: 671 CQKSFGVTPRWGWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIEIVTMKNG 850
C ++GV PR W T FWG +L AASNIIFSNG LDPWA GG+ + + S+ VT++ G
Sbjct: 382 CLDTWGVWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGG 441
Query: 851 AHHVDL 868
AHH+DL
Sbjct: 442 AHHLDL 447
>sp|Q9EPB1|DPP2_RAT Dipeptidyl-peptidase II precursor (DPP II) (Dipeptidyl aminopeptidase
II) (Quiescent cell proline dipeptidase) (Dipeptidyl
peptidase 7)
Length = 500
Score = 194 bits (493), Expect = 3e-49
Identities = 117/295 (39%), Positives = 168/295 (56%), Gaps = 9/295 (3%)
Frame = +2
Query: 11 SPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCSYPFQVLTKAYQTKG 190
+P IAFGGSYGGML+A+ R KYP++VAG+LAASAPV+ V + N F+ +T + +
Sbjct: 164 APTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVIAVAGLGNPDQFFRDVTADFYGQ- 222
Query: 191 SDACVSNVRNVWPVIQQMNDSLHLVNLSRIFHTCQPL---KNVDDLIAVLTDGLFDMGMA 361
S C VR+ + I+ + +S+ F TCQ L K++ L + + M
Sbjct: 223 SPKCAQAVRDAFQQIKDLFLQGAYDTISQNFGTCQSLSSPKDLTQLFGFARNAFTVLAMM 282
Query: 362 NYPYPANFLGPMPAWPVKEFCKPLSNIIKDPIEL-----LNAFFTGLQVFYNYTGQIQ-C 523
+YPYP NFLGP+PA PVK C+ L + + + L L +G++ ++ Q C
Sbjct: 283 DYPYPTNFLGPLPANPVKVGCERLLSEGQRIMGLRALAGLVYNSSGMEPCFDIYQMYQSC 342
Query: 524 LSTTTNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNNDRSCQKSFGVTPRW 703
T G + W+ Q CTE+ + ++ V DMF F+ + + C ++GV PR
Sbjct: 343 ADPTGCGTGSNARAWDYQACTEINLTFDSNNVTDMFPEIPFSDELRQQYCLDTWGVWPRP 402
Query: 704 GWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIEIVTMKNGAHHVDL 868
W QT FWG +L AASNIIFSNG LDPWA GG+ + + SI VT++ GAHH+DL
Sbjct: 403 DWLQTSFWGGDLKAASNIIFSNGDLDPWAGGGIQRNLSTSIIAVTIQGGAHHLDL 457
>sp|P34676|YO26_CAEEL Putative serine protease Z688.6 precursor
Length = 507
Score = 175 bits (443), Expect = 2e-43
Identities = 118/315 (37%), Positives = 159/315 (50%), Gaps = 26/315 (8%)
Frame = +2
Query: 2 ASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMV--GNIENCSYPFQVLTKA 175
A S VIAFGGSYGGML+AWFR KYP+IV G++AASAPV NI Y F ++T+A
Sbjct: 161 AQKSAVIAFGGSYGGMLSAWFRIKYPHIVDGAIAASAPVFWFTDSNIPEDVYDF-IVTRA 219
Query: 176 YQTKGSDACVSNVRNVWPVIQQMNDSLHLVNLSRIFHTCQP---LKNVDD---LIAVLTD 337
+ G + + W + ++ S + + P L+N DD L + +
Sbjct: 220 FLDAGCNR--KAIEKGWIALDELAKSDSGRQYLNVLYKLDPKSKLENKDDIGFLKQYIRE 277
Query: 338 GLFDMGMANYPYPANFLGPMPAWPVKEFCKPLSNIIKDPIELLNAFFTGLQVFYNYTGQ- 514
+ M M NYPYP +FL +PAWPVKE CK S K E + + ++YNYTG
Sbjct: 278 SMEAMAMVNYPYPTSFLSSLPAWPVKEACKSASQPGKTQEESAEQLYKIVNLYYNYTGDK 337
Query: 515 -------IQCLSTTTNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASS--FNKQNNDR 667
+C S +L D GW QTCTE+ MP+C G + F+ F +
Sbjct: 338 STHCANAAKCDSAYGSLG--DPLGWPFQTCTEMVMPLCGSGYPNDFFWKDCPFTSEKYAE 395
Query: 668 SCQKSFG------VTPRWGWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSP--NPS 823
C ++F R G F +L +ASNI+FSNG LDPW+ GG +S S
Sbjct: 396 FCMQTFSSIHYNKTLLRPLAGGLAFGATSLPSASNIVFSNGYLDPWSGGGYDHSDKVQGS 455
Query: 824 IEIVTMKNGAHHVDL 868
+ V +K GAHH DL
Sbjct: 456 VISVILKQGAHHYDL 470
>sp|P34610|PCP1_CAEEL Putative serine protease pcp-1 precursor
Length = 565
Score = 137 bits (346), Expect = 3e-32
Identities = 101/316 (31%), Positives = 155/316 (49%), Gaps = 32/316 (10%)
Frame = +2
Query: 17 VIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMV--GNIENCSYPFQVLTKAYQTKG 190
VI+FGGSYGGML+AWFRQKYP+IV G+ A SAP++ + G ++ ++ + ++ Y G
Sbjct: 171 VISFGGSYGGMLSAWFRQKYPHIVKGAWAGSAPLIYMNGGGVDPGAFD-HITSRTYIDNG 229
Query: 191 SDACV-SNVRNVWPVIQQMNDSLHLVNLSRIF--HTCQPLKNVDD---LIAVLTDGLFDM 352
+ + +N N + + +N + +F ++N D L A L + + M
Sbjct: 230 CNRFILANAWNATLNLSSTDAGRQWLNNNTVFKLDPRTKIRNQTDGWNLNAYLREAIEYM 289
Query: 353 GMANYPYPANFLGPMPAWPVKEFCKPL--SNIIKDPIELLNAFFTGLQVFYNYTGQIQ-- 520
M +YPYP FL P+PAWPV C + + +L+ A ++YNY
Sbjct: 290 AMVDYPYPTGFLEPLPAWPVTVACGYMNANGTSFSDKDLVKAVANAANIYYNYNRDPNFT 349
Query: 521 -------CLSTTTNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNK------QNN 661
C T G D+ GW Q C+E+ M MC G + + + K Q
Sbjct: 350 YCIDFSICGDQGTGGLGGDELGWPWQECSEIIMAMCASGGSNDVFWNECGKDIYQTLQQG 409
Query: 662 DRSCQKSFGVTPRWGWG----QTLFWGKNLNAASNIIFSNGLLDPWAAGGV---FNSPNP 820
S KS G TP+ W +TL+ G +L+ +SN+I + G LDPW+ GG N+
Sbjct: 410 CVSIFKSMGWTPK-NWNIDAVKTLY-GYDLSGSSNLILTQGHLDPWSGGGYKVDQNNAAR 467
Query: 821 SIEIVTMKNGAHHVDL 868
I ++ + AHH+DL
Sbjct: 468 GIYVLEIPGSAHHLDL 483
>sp|P34528|YM67_CAEEL Putative serine protease K12H4.7 precursor
Length = 510
Score = 75.9 bits (185), Expect = 1e-13
Identities = 77/313 (24%), Positives = 122/313 (38%), Gaps = 30/313 (9%)
Frame = +2
Query: 20 IAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCSYPFQVLTKAYQ---TKG 190
+ FGGSY G LAAW R K+P +V ++ +S PV F+ + Q T+
Sbjct: 182 VTFGGSYSGALAAWTRAKHPELVYAAVGSSGPV-------QAEVDFKEYLEVVQNSITRN 234
Query: 191 SDACVSNVRNVWPVIQQ-MNDSLHLVNLSRIFHTCQPLKNVDDLIAVLTDGLFDMGMANY 367
S C ++V + ++ + S L FH CQ ++ D + + ++ M
Sbjct: 235 STECAASVTQGFNLVASLLQTSDGRKQLKTAFHLCQDIQMDDKSLKYFWETVYSPYMEVV 294
Query: 368 PYPANFLGPMPAWPV--KEFCKPLSNIIKDPIELL---NAFFTGLQVFY-----NYTGQI 517
Y + G C+ N P++ L N +F + ++ +Y G I
Sbjct: 295 QYSGDAAGSFATQLTISHAICRYHINTKSTPLQKLKQVNDYFNQVSGYFGCNDIDYNGFI 354
Query: 518 QCLSTTTNLPGLDDNGWNVQTCTELPMPMCTD---------GVKDM---FY----ASSFN 649
+ T D W QTCTE T GV ++ +Y + +
Sbjct: 355 SFMKDETFGEAQSDRAWVWQTCTEFGYYQSTSSATAGPWFGGVSNLPAQYYIDECTAIYG 414
Query: 650 KQNNDRSCQKSFGVTPRWGWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIE 829
N + Q S T ++ G+ NLN I+ NG +DPW A G S N +I
Sbjct: 415 AAYNSQEVQTSVDYTNQYYGGR-----DNLN-TDRILLPNGDIDPWHALGKLTSSNSNIV 468
Query: 830 IVTMKNGAHHVDL 868
V + AH D+
Sbjct: 469 PVVINGTAHCADM 481
>sp|P90893|YM9I_CAEEL Putative serine protease F56F10.1 precursor
Length = 540
Score = 68.2 bits (165), Expect = 3e-11
Identities = 73/310 (23%), Positives = 120/310 (38%), Gaps = 30/310 (9%)
Frame = +2
Query: 20 IAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCSYPFQVLTKAYQTKGSDA 199
+ FGGSY G LAAWFRQKYP + GS+A+SAPV N++ Y + ++ +
Sbjct: 177 VTFGGSYPGSLAAWFRQKYPQLTVGSVASSAPV----NLKLDFYEYAMVVEDDLRITDPK 232
Query: 200 CVSNVRNVWPVIQQM-------NDSLHLVNLSRIFHTCQPLKNVDDLIAVLTDGLFDMGM 358
C ++ + +Q++ N + NL F ++++ + + GM
Sbjct: 233 CAQATKDAFVQMQKLALTAEGRNSLNNHFNLQPPFDANTTKLDINNFFGNIFNTY--QGM 290
Query: 359 ANYPYPANFLGPMPAWPVKEFCKPLSNIIKDPI--ELLNAFF---------TGLQVFYNY 505
Y Y V++ C ++N + + + N F L V N
Sbjct: 291 TQYTYDGQSNSTHSDKTVRKMCDIMTNATETDVVMRVENLFLWFNQMEPASANLTVMPNS 350
Query: 506 TGQI--QCLSTTTNLPGLDD---NGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNNDRS 670
+ Q S N+ G D GW C E+ T+ ++F D
Sbjct: 351 YWDVISQVGSGDLNVLGPDGAAARGWMWLCCNEIGFLQTTNQGNNVFGTGVPLNLFID-M 409
Query: 671 CQKSFGVTPRWGW-------GQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIE 829
C FG + + Q + G + A+N++ NG LDPW A G + +
Sbjct: 410 CTDMFGDSMKMSQIMGGNKKSQNYYGGADFYNATNVVLPNGSLDPWHALGTYGTIKSQSL 469
Query: 830 IVTMKNGAHH 859
+ + NG H
Sbjct: 470 LPYLINGTAH 479
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,566,179
Number of Sequences: 369166
Number of extensions: 2187824
Number of successful extensions: 6244
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6221
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8598109270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)